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The map label for this gene is dadA [H]

Identifier: 158424576

GI number: 158424576

Start: 3373486

End: 3374763

Strand: Reverse

Name: dadA [H]

Synonym: AZC_2952

Alternate gene names: 158424576

Gene position: 3374763-3373486 (Counterclockwise)

Preceding gene: 158424577

Following gene: 158424573

Centisome position: 62.85

GC content: 71.28

Gene sequence:

>1278_bases
ATGCGGCGCGGAGGACGCAGAATGGCGCGCACGGATGCGATCGTACTCGGGGCGGGAATCGTCGGCGTCAGCGCCGCCCT
GCATCTTCGCGAACGCGGGCTCTCGGTCACGCTGATCGACCGCGCGCAGCCGGGCGAAGGCACCTCCTTCGGCAATGCGG
GCGTCATCGAGGGCAGCGGCCTCCTGCCCACCTCCTTGCCCTACGACCCGGTGGTGCTGCTGAAGCATGCGCTCAAGCTC
TCGCCCCAGAGCAACTACCGGCTCGGGGCGCTGCCGGGGCTCGCGTCGTGGCTCATCGCCTATTTCAAGGCCTCCGCGCC
GGCGGCGCAGGCGAACATCGCCCGCGACCTGCGCCCTTTGATGGCGCAGGCGCGAGGTGAGCATCGCCGGCTGGCGGAAG
AGGCGGGTGTGCAGGGCCTGCTGTCGCCCACCGGCTATCTGAAGGTCTATCGCACCGCCGCCGATTTCGCCGCCACCTCC
ACCGAGCGGCAATTGGCGGACGACCTCAACATCCCCTTCCGGGTACTGGACGAAGCGGGCGCCCGCGCTCTGGAGCCGCT
GCTGACGGGGCCGTTCGCCGCCGCCATCCACTGGCCGGATTGCGACAATGTGAGCGATCCCGGCGGGCTGGTGAAAGCCT
ATGCCCGGCTGCTGGAGCGGCGGGGAGGCCTGCTCGTGCGCGGGGATGCCCGCAGCCTCCGGCGCAGCGGCAGCCTCTGG
CGCGTGGAGACGGCGGAGGGGCCCGTGGATGGCCAGATCGCCGTGGTGGCGCTCGGCCCCTGGAGCCTCGATGCGCTGAA
GGGCCTCGGCCTCCCCCAGCCGCTGCCGCTGGCGGTGAAGCGCGGCTACCACATCCATTTCGAGCCGAAGCCCGGCCAGT
TTCTCAGCCGGGGCATCGTCGATCGCGCCGGCGGCTTCGCCCTGCAGGGCACCAAGGGCGGCATCCGGGCCACCACGGGC
ATCGAATTCGCCCGCCGGGATGATCCGGCGACCCATCGGCAAGTGCGGCAGGTGATTGCCGGCGTGCGCCGCCTCGTGGA
CGTGGGGCCTCAGGTTCACGCCGAGCCGTGGCTCGGCTTCCGGCCCGCCTTTCCGGATTCCAAGCCGGTGATCGGCCGGG
CGCCCGGCCATGCCGATCTCTTCCTCGACTTTGGCCACAGCCACTGGGGCCTGACGCTCGGTCCCGTCTCGGGCCGTCTG
CTGGCGGATCTGGTGATGGGCGTCACGCCCTTCACCGATCCGACGCCGTTCTCGCCCGCGCGTTTCGCCACGGCCTGA

Upstream 100 bases:

>100_bases
CACCGTCGCCTACCTGCTGCTGCGCCGCCGCGCGCACCGTGCCGCTTCCTGAGGACACGCATCCCGCCCGACCTTCCCCA
CGCCAGCCCCGTCCGCCAAG

Downstream 100 bases:

>100_bases
GGGCGGCCCGCGTCAGCGGGTGTAGAAGGCGGCCGGCCGCTGGCCTTCGCGGAAATAGCCATAGAGCGCCGCGACGCCCG
CCGCCTGCACCAGAAGCCCC

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MRRGGRRMARTDAIVLGAGIVGVSAALHLRERGLSVTLIDRAQPGEGTSFGNAGVIEGSGLLPTSLPYDPVVLLKHALKL
SPQSNYRLGALPGLASWLIAYFKASAPAAQANIARDLRPLMAQARGEHRRLAEEAGVQGLLSPTGYLKVYRTAADFAATS
TERQLADDLNIPFRVLDEAGARALEPLLTGPFAAAIHWPDCDNVSDPGGLVKAYARLLERRGGLLVRGDARSLRRSGSLW
RVETAEGPVDGQIAVVALGPWSLDALKGLGLPQPLPLAVKRGYHIHFEPKPGQFLSRGIVDRAGGFALQGTKGGIRATTG
IEFARRDDPATHRQVRQVIAGVRRLVDVGPQVHAEPWLGFRPAFPDSKPVIGRAPGHADLFLDFGHSHWGLTLGPVSGRL
LADLVMGVTPFTDPTPFSPARFATA

Sequences:

>Translated_425_residues
MRRGGRRMARTDAIVLGAGIVGVSAALHLRERGLSVTLIDRAQPGEGTSFGNAGVIEGSGLLPTSLPYDPVVLLKHALKL
SPQSNYRLGALPGLASWLIAYFKASAPAAQANIARDLRPLMAQARGEHRRLAEEAGVQGLLSPTGYLKVYRTAADFAATS
TERQLADDLNIPFRVLDEAGARALEPLLTGPFAAAIHWPDCDNVSDPGGLVKAYARLLERRGGLLVRGDARSLRRSGSLW
RVETAEGPVDGQIAVVALGPWSLDALKGLGLPQPLPLAVKRGYHIHFEPKPGQFLSRGIVDRAGGFALQGTKGGIRATTG
IEFARRDDPATHRQVRQVIAGVRRLVDVGPQVHAEPWLGFRPAFPDSKPVIGRAPGHADLFLDFGHSHWGLTLGPVSGRL
LADLVMGVTPFTDPTPFSPARFATA
>Mature_425_residues
MRRGGRRMARTDAIVLGAGIVGVSAALHLRERGLSVTLIDRAQPGEGTSFGNAGVIEGSGLLPTSLPYDPVVLLKHALKL
SPQSNYRLGALPGLASWLIAYFKASAPAAQANIARDLRPLMAQARGEHRRLAEEAGVQGLLSPTGYLKVYRTAADFAATS
TERQLADDLNIPFRVLDEAGARALEPLLTGPFAAAIHWPDCDNVSDPGGLVKAYARLLERRGGLLVRGDARSLRRSGSLW
RVETAEGPVDGQIAVVALGPWSLDALKGLGLPQPLPLAVKRGYHIHFEPKPGQFLSRGIVDRAGGFALQGTKGGIRATTG
IEFARRDDPATHRQVRQVIAGVRRLVDVGPQVHAEPWLGFRPAFPDSKPVIGRAPGHADLFLDFGHSHWGLTLGPVSGRL
LADLVMGVTPFTDPTPFSPARFATA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=422, Percent_Identity=26.0663507109005, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45334; Mature: 45334

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGGRRMARTDAIVLGAGIVGVSAALHLRERGLSVTLIDRAQPGEGTSFGNAGVIEGSG
CCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCC
LLPTSLPYDPVVLLKHALKLSPQSNYRLGALPGLASWLIAYFKASAPAAQANIARDLRPL
CCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
MAQARGEHRRLAEEAGVQGLLSPTGYLKVYRTAADFAATSTERQLADDLNIPFRVLDEAG
HHHHCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHHCCCCHHHHHHHC
ARALEPLLTGPFAAAIHWPDCDNVSDPGGLVKAYARLLERRGGLLVRGDARSLRRSGSLW
HHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCEE
RVETAEGPVDGQIAVVALGPWSLDALKGLGLPQPLPLAVKRGYHIHFEPKPGQFLSRGIV
EEECCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHHH
DRAGGFALQGTKGGIRATTGIEFARRDDPATHRQVRQVIAGVRRLVDVGPQVHAEPWLGF
HHCCCEEEECCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RPAFPDSKPVIGRAPGHADLFLDFGHSHWGLTLGPVSGRLLADLVMGVTPFTDPTPFSPA
CCCCCCCCCCEECCCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
RFATA
CCCCC
>Mature Secondary Structure
MRRGGRRMARTDAIVLGAGIVGVSAALHLRERGLSVTLIDRAQPGEGTSFGNAGVIEGSG
CCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCC
LLPTSLPYDPVVLLKHALKLSPQSNYRLGALPGLASWLIAYFKASAPAAQANIARDLRPL
CCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
MAQARGEHRRLAEEAGVQGLLSPTGYLKVYRTAADFAATSTERQLADDLNIPFRVLDEAG
HHHHCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHHCCCCHHHHHHHC
ARALEPLLTGPFAAAIHWPDCDNVSDPGGLVKAYARLLERRGGLLVRGDARSLRRSGSLW
HHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCEE
RVETAEGPVDGQIAVVALGPWSLDALKGLGLPQPLPLAVKRGYHIHFEPKPGQFLSRGIV
EEECCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHHH
DRAGGFALQGTKGGIRATTGIEFARRDDPATHRQVRQVIAGVRRLVDVGPQVHAEPWLGF
HHCCCEEEECCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RPAFPDSKPVIGRAPGHADLFLDFGHSHWGLTLGPVSGRLLADLVMGVTPFTDPTPFSPA
CCCCCCCCCCEECCCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
RFATA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]