| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yqeB [C]
Identifier: 158424553
GI number: 158424553
Start: 3350214
End: 3350537
Strand: Direct
Name: yqeB [C]
Synonym: AZC_2929
Alternate gene names: 158424553
Gene position: 3350214-3350537 (Clockwise)
Preceding gene: 158424543
Following gene: 158424554
Centisome position: 62.39
GC content: 70.06
Gene sequence:
>324_bases ATGCTGGCTCGTGAAGACGATGTGCTGGAAGCCGCCGCGCGGTGGCGCGCCGAAGGCAAGGGTGTGGCCCTCGCCACCGT GCTTGAGACCTGGGGCTCCGCCCCCCGCCCCGTGGGCAGCCACCTCGCCATTGACGAGACCGGCAACTTCCTCGGCTCCG TGTCCGGCGGCTGCGTCGAGGGTGCCGTGGTGACGGAAGCGCTGGACGTGATCTCCCAGGGGGCGCCGAAGGTGCTTGAG TTCGGCGTGGCGGACGAGACCGCCTGGCGCGTCGGCCTGTCGTGTGGCGGAGCCATCCGCATCTATGTGGAACGGGTGGA CTGA
Upstream 100 bases:
>100_bases CCGGGCTGCAAAGCCGACGGCCCAGCCCTATATCTGGCTCTATATAGGCCGCAGCCCCCCGCGCCAACGCGCTGGCTGCT GCGCCCGCCGGAGACCTGCC
Downstream 100 bases:
>100_bases GGAGGCACCATGGATCTCGCCCTTCTCACGGCCCTCAATGCCGAGCGCGCCGCCCGACGCGCCGCCGTGCTCGTCACCCA TCTCGCCTCCGGCCGCCAGC
Product: XdhC family protein
Products: NA
Alternate protein names: XdhC/CoxI Family Protein; Xanthine Dehydrogenase; Carbon Monoxide Dehydrogenase Accessory Protein; XdhC And CoxI Family; Xanthine And CO Dehydrogenase Maturation Factor; Lipoprotein; Xanthine Dehydrogenase Accessory Factor XdhC/CoxI; XdhC/CoxF Family Protein; Xanthine And Co Dehydrogenase Maturation Factor; CoxI Protein; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Accessory Factor Subfamily; XdhC Homologue; Xanthine Dehydrogenase Accessory Factor Subfamily Putative; XdhC Family Protein; Carbon Monoxide Dehydrogenase Accesory Protein; Xanthine/CO Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MLAREDDVLEAAARWRAEGKGVALATVLETWGSAPRPVGSHLAIDETGNFLGSVSGGCVEGAVVTEALDVISQGAPKVLE FGVADETAWRVGLSCGGAIRIYVERVD
Sequences:
>Translated_107_residues MLAREDDVLEAAARWRAEGKGVALATVLETWGSAPRPVGSHLAIDETGNFLGSVSGGCVEGAVVTEALDVISQGAPKVLE FGVADETAWRVGLSCGGAIRIYVERVD >Mature_107_residues MLAREDDVLEAAARWRAEGKGVALATVLETWGSAPRPVGSHLAIDETGNFLGSVSGGCVEGAVVTEALDVISQGAPKVLE FGVADETAWRVGLSCGGAIRIYVERVD
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11126; Mature: 11126
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAREDDVLEAAARWRAEGKGVALATVLETWGSAPRPVGSHLAIDETGNFLGSVSGGCVE CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCC GAVVTEALDVISQGAPKVLEFGVADETAWRVGLSCGGAIRIYVERVD HHHHHHHHHHHHCCCCHHEEECCCCCCCEEECCCCCCEEEEEEEECC >Mature Secondary Structure MLAREDDVLEAAARWRAEGKGVALATVLETWGSAPRPVGSHLAIDETGNFLGSVSGGCVE CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCC GAVVTEALDVISQGAPKVLEFGVADETAWRVGLSCGGAIRIYVERVD HHHHHHHHHHHHCCCCHHEEECCCCCCCEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA