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The map label for this gene is recA [H]

Identifier: 158424479

GI number: 158424479

Start: 3251120

End: 3252211

Strand: Reverse

Name: recA [H]

Synonym: AZC_2855

Alternate gene names: 158424479

Gene position: 3252211-3251120 (Counterclockwise)

Preceding gene: 158424480

Following gene: 158424478

Centisome position: 60.57

GC content: 65.2

Gene sequence:

>1092_bases
ATGACTCAGTCCACTCTCAGACTCGTCGAAGGGTCCTCCATGGATAAGACCAAGGCGCTGGACGCCGCGCTCTCGCAGAT
CGAGCGGCATTTCGGCAAAGGCTCGATCATGCGGCTCGGCAAGAGCGGCAAGGTGATGGAGGTCGAAAGCATCTCCTCGG
GCTCGCTCGGCCTCGATATCGCGCTCGGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATTTACGGTCCCGAATCC
TCGGGCAAGACCACGCTGGCGCTGCATACCATCGCCGAGGCGCAGAAGAAGGGCGGCACCTGCGCCTTCATCGACGCCGA
GCATGCGCTCGATCCGATCTATGCCCGCAAGCTGGGCGTCAATCTCGACGACCTGCTGATCTCGCAGCCCGACGCTGGCG
AGCAGGCGCTGGAGATCGCTGACACGCTGGTGCGCTCCGGCGCCATCGACGTGCTGGTGGTCGATTCGGTGGCCGCCCTC
ACGCCGCGTGCCGAACTCGACGGCGAGATGGGCGACAACCAGCCCGGCATGCAGGCCCGCCTCATGAGCCAGGCACTGCG
CAAGCTCACCGCGTCGATCTCCAAGTCGAACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGT
ACGGCTCGCCCGAGACGACCACGGGCGGCAATGCGCTGAAGTTCTACGCCTCCGTGCGCCTCGACATCCGCCGCATCGGC
ATGATCAAGGAGCGCGACGAGGTGGTGGGCAACCAGACCCGCGTGAAGGTGGTCAAGAACAAGCTGGCCCCGCCCTTCAA
GCAGGTCGAGTTCGACATCATGTATGGCGAGGGCGTCTCCAAGATGGGCGAACTGCTCGATCTCGGCGTGCGCGCCGGCG
TGGTCGAGAAGTCCGGTGCCTGGTTCTCCTACGACAGCCAGCGCCTCGGCCAGGGCCGCGAGAATGCCAAGACCTTCCTG
CGGCAGAACCCCGAGGTGGCCGGCCGCATCGAGGCGACCATCCGCCAGAATGCCGGCCTGATTGCCGACCAGATCCTCAC
CGGCTCGCCGGAAGACGAGGATGGAGATGGGGATGCGGCCGCCGAGGCCTGA

Upstream 100 bases:

>100_bases
TGAAGGCAGAGAAATCAAAAAGAACATATTGCGAACAGAGAACAAATGAGGTACAAAATTCCCACGGCCATTCCTCTTGC
GCCAGGCACGGAGCGCGGCG

Downstream 100 bases:

>100_bases
TCCCGTCTTTCCATCGGACGATGTTCGGGGCGGCTGCGGCCGCCCTTTTCTTTGGCGGTCCTGCGGAACCGCCGGTGCGG
CCCCGCCGGGCGCTTGCTGG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MTQSTLRLVEGSSMDKTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDIALGIGGLPKGRIVEIYGPES
SGKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAAL
TPRAELDGEMGDNQPGMQARLMSQALRKLTASISKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG
MIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELLDLGVRAGVVEKSGAWFSYDSQRLGQGRENAKTFL
RQNPEVAGRIEATIRQNAGLIADQILTGSPEDEDGDGDAAAEA

Sequences:

>Translated_363_residues
MTQSTLRLVEGSSMDKTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDIALGIGGLPKGRIVEIYGPES
SGKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAAL
TPRAELDGEMGDNQPGMQARLMSQALRKLTASISKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG
MIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELLDLGVRAGVVEKSGAWFSYDSQRLGQGRENAKTFL
RQNPEVAGRIEATIRQNAGLIADQILTGSPEDEDGDGDAAAEA
>Mature_362_residues
TQSTLRLVEGSSMDKTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDIALGIGGLPKGRIVEIYGPESS
GKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAALT
PRAELDGEMGDNQPGMQARLMSQALRKLTASISKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGM
IKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELLDLGVRAGVVEKSGAWFSYDSQRLGQGRENAKTFLR
QNPEVAGRIEATIRQNAGLIADQILTGSPEDEDGDGDAAAEA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=322, Percent_Identity=69.5652173913043, Blast_Score=473, Evalue=1e-135,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38838; Mature: 38707

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSTLRLVEGSSMDKTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDI
CCCHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEE
ALGIGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHCC
NLDDLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDNQPGMQAR
CHHHHEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHH
LMSQALRKLTASISKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEHHHHHHC
MIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELLDLGVRAGVVEKSGA
CHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEECCCHHHHHHHHHHHHHCCEEECCCC
WFSYDSQRLGQGRENAKTFLRQNPEVAGRIEATIRQNAGLIADQILTGSPEDEDGDGDAA
EEECCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCC
AEA
CCC
>Mature Secondary Structure 
TQSTLRLVEGSSMDKTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDI
CCHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEE
ALGIGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHCC
NLDDLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDNQPGMQAR
CHHHHEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHH
LMSQALRKLTASISKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEHHHHHHC
MIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELLDLGVRAGVVEKSGA
CHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEECCCHHHHHHHHHHHHHCCEEECCCC
WFSYDSQRLGQGRENAKTFLRQNPEVAGRIEATIRQNAGLIADQILTGSPEDEDGDGDAA
EEECCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCC
AEA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]