| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ophA1 [H]
Identifier: 158424410
GI number: 158424410
Start: 3166822
End: 3167766
Strand: Reverse
Name: ophA1 [H]
Synonym: AZC_2786
Alternate gene names: 158424410
Gene position: 3167766-3166822 (Counterclockwise)
Preceding gene: 158424411
Following gene: 158424409
Centisome position: 58.99
GC content: 72.28
Gene sequence:
>945_bases ATGCGGCGACACGGTGCGATCCTGACCCGCGTGAGCGCCATCGAGGATGCGGGCGAGGAGGTCAAGCGCTTCACCCTTCG GGATCCCGAGGGGTGGGATCTTCCCCCGGCGCGGCCCGGCGGCCATGTGGACCTTTATCTCCCCGGAGGCCTCACACGCA CGTATTCCCTGTGCGGAGACCCGGCGCAGCGGGACCGCTATGTGGTCGCGGTGAAGCGCGAGGCGGAGGGCCGGGGCGGC TCCATCCGGCTGCACGACGCTGTGAGCGTGGGGCATGAGATGCACGTGGGCCTGCCGCGCGGCGGCGTGCCGCTCGGGCC CGGCTTTCAGCTTTTCATCGCAGGCGGGATCGGGGTCACGCCCTTCCTCTCGGCGGCCGCGGCGCTGTTGGCACAGGGGC GGGAGGACTTCCACCTGCACGTGGCGAGCCGGGGTGCCCCGCCGCTGGCGGACCAGCTCGCCCCGCTGCTCGAACGCGGC CTCGCGTCGGTTCACGATACGACGCAGGCACCGCGGCGGGCTGTCTCCGACGTCATCAGGGGGGCGCCGGGAGAGGCTTC CCTCGCCTGCTGCGGTCCGCTGTCCATGCTGGATGACGTCGCGGCGGCCACCGAGGGATGGCCGGCCGAGCGGGTGCATC TGGAGCGCTTCGTGCCGCCGCCCCTCGTGCCCGATCCGGATGCGCGGGACTATCGGCTGGTGCTGGCGAAGCGGGGCATC GAACTCGACGTGCCCGCCGGAGCCAACATGGCCGACGCGCTGGCGGCAGCGGGCGTGCAGGTGCCGGTCTCCTGCGGTGG CGGCATCTGTGGCACCTGCGCCGTTGTCTATCTTGAGGGCCAGCCCCTGCACCGCGACCGCTGCCTGTCCCAGACCGAGC GCGCGAGCCGGCTTATGCCGTGTGTGGCCCAATCGGCGGGCGAACGGCTGGTGCTGGACCTGTGA
Upstream 100 bases:
>100_bases AAGGCGATCTTTGATCCCTTGATCAACCGCTCCGGCCTCAACTGCCGCATCCTCGAAGGCGGCACGGTGCGGATCGGTGA TCTGGTGCGGAACATCTGAC
Downstream 100 bases:
>100_bases TCCGAGGGGAGCGACGGAAGAGGCGATGTCGGAAAGCCACACTCGTCCACAACCAGAGGGTGAGGGTGGGGATTCTTGAC CCAAACGGTATCGCATTTTG
Product: flavodoxin reductases
Products: NA
Alternate protein names: PDR [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MRRHGAILTRVSAIEDAGEEVKRFTLRDPEGWDLPPARPGGHVDLYLPGGLTRTYSLCGDPAQRDRYVVAVKREAEGRGG SIRLHDAVSVGHEMHVGLPRGGVPLGPGFQLFIAGGIGVTPFLSAAAALLAQGREDFHLHVASRGAPPLADQLAPLLERG LASVHDTTQAPRRAVSDVIRGAPGEASLACCGPLSMLDDVAAATEGWPAERVHLERFVPPPLVPDPDARDYRLVLAKRGI ELDVPAGANMADALAAAGVQVPVSCGGGICGTCAVVYLEGQPLHRDRCLSQTERASRLMPCVAQSAGERLVLDL
Sequences:
>Translated_314_residues MRRHGAILTRVSAIEDAGEEVKRFTLRDPEGWDLPPARPGGHVDLYLPGGLTRTYSLCGDPAQRDRYVVAVKREAEGRGG SIRLHDAVSVGHEMHVGLPRGGVPLGPGFQLFIAGGIGVTPFLSAAAALLAQGREDFHLHVASRGAPPLADQLAPLLERG LASVHDTTQAPRRAVSDVIRGAPGEASLACCGPLSMLDDVAAATEGWPAERVHLERFVPPPLVPDPDARDYRLVLAKRGI ELDVPAGANMADALAAAGVQVPVSCGGGICGTCAVVYLEGQPLHRDRCLSQTERASRLMPCVAQSAGERLVLDL >Mature_314_residues MRRHGAILTRVSAIEDAGEEVKRFTLRDPEGWDLPPARPGGHVDLYLPGGLTRTYSLCGDPAQRDRYVVAVKREAEGRGG SIRLHDAVSVGHEMHVGLPRGGVPLGPGFQLFIAGGIGVTPFLSAAAALLAQGREDFHLHVASRGAPPLADQLAPLLERG LASVHDTTQAPRRAVSDVIRGAPGEASLACCGPLSMLDDVAAATEGWPAERVHLERFVPPPLVPDPDARDYRLVLAKRGI ELDVPAGANMADALAAAGVQVPVSCGGGICGTCAVVYLEGQPLHRDRCLSQTERASRLMPCVAQSAGERLVLDL
Specific function: Component of the electron transfer chain involved in pyridine nucleotide-dependent dihydroxylation of phthalate. Utilizes FMN to mediate electron transfer from the two-electron donor, NADH, to the one-electron acceptor, (2Fe-2S) [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788104, Length=326, Percent_Identity=33.1288343558282, Blast_Score=151, Evalue=4e-38, Organism=Escherichia coli, GI1787658, Length=299, Percent_Identity=27.4247491638796, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 33098; Mature: 33098
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHGAILTRVSAIEDAGEEVKRFTLRDPEGWDLPPARPGGHVDLYLPGGLTRTYSLCGD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCC PAQRDRYVVAVKREAEGRGGSIRLHDAVSVGHEMHVGLPRGGVPLGPGFQLFIAGGIGVT CCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCHH PFLSAAAALLAQGREDFHLHVASRGAPPLADQLAPLLERGLASVHDTTQAPRRAVSDVIR HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAPGEASLACCGPLSMLDDVAAATEGWPAERVHLERFVPPPLVPDPDARDYRLVLAKRGI CCCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC ELDVPAGANMADALAAAGVQVPVSCGGGICGTCAVVYLEGQPLHRDRCLSQTERASRLMP EEECCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH CVAQSAGERLVLDL HHHHCCCCEEEEEC >Mature Secondary Structure MRRHGAILTRVSAIEDAGEEVKRFTLRDPEGWDLPPARPGGHVDLYLPGGLTRTYSLCGD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCC PAQRDRYVVAVKREAEGRGGSIRLHDAVSVGHEMHVGLPRGGVPLGPGFQLFIAGGIGVT CCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCHH PFLSAAAALLAQGREDFHLHVASRGAPPLADQLAPLLERGLASVHDTTQAPRRAVSDVIR HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAPGEASLACCGPLSMLDDVAAATEGWPAERVHLERFVPPPLVPDPDARDYRLVLAKRGI CCCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC ELDVPAGANMADALAAAGVQVPVSCGGGICGTCAVVYLEGQPLHRDRCLSQTERASRLMP EEECCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH CVAQSAGERLVLDL HHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9851995; 1280857 [H]