| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158424408
Identifier: 158424408
GI number: 158424408
Start: 3164155
End: 3165621
Strand: Reverse
Name: 158424408
Synonym: AZC_2784
Alternate gene names: NA
Gene position: 3165621-3164155 (Counterclockwise)
Preceding gene: 158424409
Following gene: 158424406
Centisome position: 58.95
GC content: 66.87
Gene sequence:
>1467_bases ATGGAAACTCGAGCAATTCTGCATCTTGCAGCGCGTCCGCTGCGGACGGCGGCCGCCGCGCTGGCGCTCGGCTGCGCCAT GCCCGCGCTTCTGCCCCTGTGCGCCGTCACACCGGCGCTTGCCGCGCCCGCCGAGCAGCTTCAGGAGCTGGCGGTGGATG CCTATCTCTATTTCTATCCGCTGGTCACCATGGATGTGACACGCAAGCAGCTGACCAACCTGCCGAAGGGCGCCGGCATC GGCGGGCCGGCCAACAGCTTCGTCAACGTGCCGGCCTTCCCGAGCGCGGACATGCGCGCCGTGGTGCGCCCGAACTTCGA TACGCTCTATTCCTCCGCCTGGCTCGACCTGACGCAGGGGCCGATCGTCGTCTCCGTGCCGGATACGGACGGGCGCTATT ATCTGCTTCCGATGATGGACATGTGGACGGACGTGTTCGCCTCGCCCGGCTCGCGCACCACCGGCACCAAGGCGGGCAAC TTCCTCGTCACCCCGCCCGGCTGGACGGGTACGGCGCCTGAGGGTGTCACGCGCATCGGCGCCACCACCCCGTTCATCTG GATCATCGGCCGGACCAAGACCGACGGCCCGGCGGACTATCCGGCCGTGCACAAGATCCAGGCCGGCTTCAAGCTCACCC CGCTCGCCTACTGGGGCAAGGGGCCTGCGCCGGAGCCCGAGCAGAAGATCGATGCATCCGTGGATGTGAAGACGCCGCCG AAGATCCAGGTGGACACCATGCCGGGGCCCGCCTTCTTCGCCTATGCGGCGGAGCTCCTGAAGCTGCATCCGCCCCACGC CACGGACCAGCCCATCATCGCGCAGCTGAAGCGCCTCGGCATCGAGCCAGGACAGAGCCTCGATCCGTCCAAGCTTCCGC CGGAAACCCGTGCGGCCATGGAGGCGGCACCGGAGAAGGCGCAGCATCTCATGCTCTGGAAACTGCCGACGCTGGCGCGG GTGGTGAACAACTGGTCACTGAACACTGATACCATGGGCGTCTATGGTAATTATTATCTGAAGCGCGCCATCGTCGCGCA GGTGGGCCTCGGCGCGAACGTGCCGCAGGATGCGGTCTATCCGATGGCCCTGCTCGACGGGCAGAACCAGCCGCTCGATG GCGTCAATGCCTACCGCATCCGCTTCGAGAAAGGCGCGGTGCCGCCGGTGGACGCCTTCTGGTCCATCACGCTCTACGAC AAGGACGGCTTCCAGGTGGCCAATCCGCTCAACCGCTTCGCGGTGAGCAGCTGGATGCCGCTGAAGACCGATCCTGACGG CGGTCTCACCCTCTTTATCCAGGCGGACAATCCCGGCAAGGAGCGGGAGGCCAACTGGCTGCCCGCGCCGAAGGGGCCGT TCAACCTGACCATGCGGCTCTATGCGCCGCGCTCGGACGTGCTGACCGGACGCTGGGTGCCTCCGGCGGTGGAGAAACAG CCGGCCACGGCGCTCCTGCCGCAGTGA
Upstream 100 bases:
>100_bases CCCCCTCGGCGGTCCGGCCGTCACATGCGGCGGAGGTCGACAGGGCTCGGCATTGTGCCGGGTGCGACCTGCGCCTTGAG CGAGCAAGAGGGGGAAACCA
Downstream 100 bases:
>100_bases GGCCGGAAGCGTCCGAAGTCGGGGGCGCCCTGCAATTGCGGGCGCCGTGCGTCCAGGTCTGGGCACGGCGCCTGCGTCAC GGGAGATGCAGAAGCGTTTG
Product: transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues METRAILHLAARPLRTAAAALALGCAMPALLPLCAVTPALAAPAEQLQELAVDAYLYFYPLVTMDVTRKQLTNLPKGAGI GGPANSFVNVPAFPSADMRAVVRPNFDTLYSSAWLDLTQGPIVVSVPDTDGRYYLLPMMDMWTDVFASPGSRTTGTKAGN FLVTPPGWTGTAPEGVTRIGATTPFIWIIGRTKTDGPADYPAVHKIQAGFKLTPLAYWGKGPAPEPEQKIDASVDVKTPP KIQVDTMPGPAFFAYAAELLKLHPPHATDQPIIAQLKRLGIEPGQSLDPSKLPPETRAAMEAAPEKAQHLMLWKLPTLAR VVNNWSLNTDTMGVYGNYYLKRAIVAQVGLGANVPQDAVYPMALLDGQNQPLDGVNAYRIRFEKGAVPPVDAFWSITLYD KDGFQVANPLNRFAVSSWMPLKTDPDGGLTLFIQADNPGKEREANWLPAPKGPFNLTMRLYAPRSDVLTGRWVPPAVEKQ PATALLPQ
Sequences:
>Translated_488_residues METRAILHLAARPLRTAAAALALGCAMPALLPLCAVTPALAAPAEQLQELAVDAYLYFYPLVTMDVTRKQLTNLPKGAGI GGPANSFVNVPAFPSADMRAVVRPNFDTLYSSAWLDLTQGPIVVSVPDTDGRYYLLPMMDMWTDVFASPGSRTTGTKAGN FLVTPPGWTGTAPEGVTRIGATTPFIWIIGRTKTDGPADYPAVHKIQAGFKLTPLAYWGKGPAPEPEQKIDASVDVKTPP KIQVDTMPGPAFFAYAAELLKLHPPHATDQPIIAQLKRLGIEPGQSLDPSKLPPETRAAMEAAPEKAQHLMLWKLPTLAR VVNNWSLNTDTMGVYGNYYLKRAIVAQVGLGANVPQDAVYPMALLDGQNQPLDGVNAYRIRFEKGAVPPVDAFWSITLYD KDGFQVANPLNRFAVSSWMPLKTDPDGGLTLFIQADNPGKEREANWLPAPKGPFNLTMRLYAPRSDVLTGRWVPPAVEKQ PATALLPQ >Mature_488_residues METRAILHLAARPLRTAAAALALGCAMPALLPLCAVTPALAAPAEQLQELAVDAYLYFYPLVTMDVTRKQLTNLPKGAGI GGPANSFVNVPAFPSADMRAVVRPNFDTLYSSAWLDLTQGPIVVSVPDTDGRYYLLPMMDMWTDVFASPGSRTTGTKAGN FLVTPPGWTGTAPEGVTRIGATTPFIWIIGRTKTDGPADYPAVHKIQAGFKLTPLAYWGKGPAPEPEQKIDASVDVKTPP KIQVDTMPGPAFFAYAAELLKLHPPHATDQPIIAQLKRLGIEPGQSLDPSKLPPETRAAMEAAPEKAQHLMLWKLPTLAR VVNNWSLNTDTMGVYGNYYLKRAIVAQVGLGANVPQDAVYPMALLDGQNQPLDGVNAYRIRFEKGAVPPVDAFWSITLYD KDGFQVANPLNRFAVSSWMPLKTDPDGGLTLFIQADNPGKEREANWLPAPKGPFNLTMRLYAPRSDVLTGRWVPPAVEKQ PATALLPQ
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52835; Mature: 52835
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRAILHLAARPLRTAAAALALGCAMPALLPLCAVTPALAAPAEQLQELAVDAYLYFYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LVTMDVTRKQLTNLPKGAGIGGPANSFVNVPAFPSADMRAVVRPNFDTLYSSAWLDLTQG HHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHHHHEEECCC PIVVSVPDTDGRYYLLPMMDMWTDVFASPGSRTTGTKAGNFLVTPPGWTGTAPEGVTRIG CEEEEECCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHC ATTPFIWIIGRTKTDGPADYPAVHKIQAGFKLTPLAYWGKGPAPEPEQKIDASVDVKTPP CCCCEEEEEEECCCCCCCCCCHHHHCCCCCEECEEEECCCCCCCCCHHHCCCEEECCCCC KIQVDTMPGPAFFAYAAELLKLHPPHATDQPIIAQLKRLGIEPGQSLDPSKLPPETRAAM CEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH EAAPEKAQHLMLWKLPTLARVVNNWSLNTDTMGVYGNYYLKRAIVAQVGLGANVPQDAVY HHCHHHHHEEEEECCHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHCC PMALLDGQNQPLDGVNAYRIRFEKGAVPPVDAFWSITLYDKDGFQVANPLNRFAVSSWMP CCCEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCHHCHHHHHHHHCCCC LKTDPDGGLTLFIQADNPGKEREANWLPAPKGPFNLTMRLYAPRSDVLTGRWVPPAVEKQ CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC PATALLPQ CCCCCCCC >Mature Secondary Structure METRAILHLAARPLRTAAAALALGCAMPALLPLCAVTPALAAPAEQLQELAVDAYLYFYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LVTMDVTRKQLTNLPKGAGIGGPANSFVNVPAFPSADMRAVVRPNFDTLYSSAWLDLTQG HHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHHHHEEECCC PIVVSVPDTDGRYYLLPMMDMWTDVFASPGSRTTGTKAGNFLVTPPGWTGTAPEGVTRIG CEEEEECCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHC ATTPFIWIIGRTKTDGPADYPAVHKIQAGFKLTPLAYWGKGPAPEPEQKIDASVDVKTPP CCCCEEEEEEECCCCCCCCCCHHHHCCCCCEECEEEECCCCCCCCCHHHCCCEEECCCCC KIQVDTMPGPAFFAYAAELLKLHPPHATDQPIIAQLKRLGIEPGQSLDPSKLPPETRAAM CEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH EAAPEKAQHLMLWKLPTLARVVNNWSLNTDTMGVYGNYYLKRAIVAQVGLGANVPQDAVY HHCHHHHHEEEEECCHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHCC PMALLDGQNQPLDGVNAYRIRFEKGAVPPVDAFWSITLYDKDGFQVANPLNRFAVSSWMP CCCEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCHHCHHHHHHHHCCCC LKTDPDGGLTLFIQADNPGKEREANWLPAPKGPFNLTMRLYAPRSDVLTGRWVPPAVEKQ CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC PATALLPQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA