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The map label for this gene is yjeA [H]

Identifier: 158424331

GI number: 158424331

Start: 3070452

End: 3071837

Strand: Reverse

Name: yjeA [H]

Synonym: AZC_2707

Alternate gene names: 158424331

Gene position: 3071837-3070452 (Counterclockwise)

Preceding gene: 158424332

Following gene: 158424330

Centisome position: 57.21

GC content: 66.23

Gene sequence:

>1386_bases
TTGCGCCCTTTTACCGTCGGTCGCTGCCGGGTGATCCCGCAAATAATCCAGATCCTGCATGGAAACACCGTCAGCCATGC
GGCCATCGCGTGGCGCCGCGCTGGCGCGCGCCCGCGCAAAGGCGTAAGAAACTACTTGGGGTTGATCGCCGCAATCTGCG
CTTTCGGGCTGGATGGAGCCACGGCTTCACACTTTCTCCACCCTGTTGGGCTGAAACTGGCGGCAATCATCGTTCAACGG
GTGCAAGGTCTGGCCGTGAAAGTCATCGTCGCAGCGTCTGCCGTCGGGGCAGCGGCCGTCCTTGGCCTCGGGTTCGTGTT
CGGACCCATGTTGATGTCGTCGTCCGAGTCCGCGACGGCCGCCGTCTCGAAGCCCGTGCCCACCATTTCGGCTCCCGCAA
CGGGCGCGGTGCAGGTGGCGCAGGCCAATGTTCCGGCCAAGCTCCCCATCTCCAGCGACGCCTCCAGCAACCCCTTCTTC
TCCTCGGCCTTCCCGCCCGGTGCGGCGAATCCGAACCCGGTCGCCATGCTCGGCCCGAGCGCGCCGCCGCCCGTCGAGGC
GTCCGCGCCCAAGGGACCTGCGGCCTATCGTCAGGCCAATGTGGACGGGCCCTATATCGCCCTGACCTTCGACGACGGCC
CGAGCCCGGAGACGACGCCGAAGCTGCTGAAGATTCTCGAAGAACGCCACATCAAGGCGACCTTCTTCATGCTCGGCCAG
AATGTCGCCGCGAACCCCGAGGTGGTGCGCGCGGTGGCGGCCGGAGGCAACGAGATCGGCAGCCATTCCTGGAACCACCC
GCAACTGCCCAAGATTCCGGTCGCGGCTGCGGACAAGCAGCTTGAGGATACGTCCGACGCCATCTTCAACGTGACGGGCC
GTCGTCCCATCTATCTGCGCCCGCCCTATGGCGCCATGACCAAGTCCCTGGAAGCCCATATCGAACAGAAGTACGGCCTC
AGCCTGATCTTCTGGTCGGTGGACCCGCTGGACTGGAAGATCCGCGATTCGCAGAGCGTCTACGACCAGATCATGAAGCA
GGTCCGACCCGGCGCCATCATCCTGTCGCACGATATCCATCCGACCACGGTGGCCGCCATGCCGCGCGTGATCGATACGC
TGCTGGCCAAGGGCTACAAGTTCGTCACGGTTTCCGAACTCATTGCCATGAACAAGCCGGCCCCGCCCAAGCCCGTCGCG
GCCGCGGCGCCTCCCGGTGCGGTGCAGCAGCGCAAGAAGCCGAAGCAGACGGCCCAGAACACGCCCGCGGGTCAGGCGAA
GCCCGCTGTCGCCACGCGTCCGGCGCCTGCGCCGTCGCCGGCGTCCGCCACGGTTCCGGGCGAGCCCATGACGATCCGTC
CCGGCGGCACCGTCGGCATCTACTGA

Upstream 100 bases:

>100_bases
CAGCGAGACTCCGACCGCCCAGAGCCTGGGTGCGGCCTATACCGACGGCACGCTTGCGCTGGCAGAGAGATTCCTGAGCA
GCTTTGCCTGAGCAGGGGCG

Downstream 100 bases:

>100_bases
GCTGAAACGGGCCGCTTGTGGCGGCCCGTGCCTGTTCTAGACTGGGCGCTTCCGCCTGAGGCGCAGGCTAGGTCGTTCCA
TGTCCATCCAGCTTGAGATT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MRPFTVGRCRVIPQIIQILHGNTVSHAAIAWRRAGARPRKGVRNYLGLIAAICAFGLDGATASHFLHPVGLKLAAIIVQR
VQGLAVKVIVAASAVGAAAVLGLGFVFGPMLMSSSESATAAVSKPVPTISAPATGAVQVAQANVPAKLPISSDASSNPFF
SSAFPPGAANPNPVAMLGPSAPPPVEASAPKGPAAYRQANVDGPYIALTFDDGPSPETTPKLLKILEERHIKATFFMLGQ
NVAANPEVVRAVAAGGNEIGSHSWNHPQLPKIPVAAADKQLEDTSDAIFNVTGRRPIYLRPPYGAMTKSLEAHIEQKYGL
SLIFWSVDPLDWKIRDSQSVYDQIMKQVRPGAIILSHDIHPTTVAAMPRVIDTLLAKGYKFVTVSELIAMNKPAPPKPVA
AAAPPGAVQQRKKPKQTAQNTPAGQAKPAVATRPAPAPSPASATVPGEPMTIRPGGTVGIY

Sequences:

>Translated_461_residues
MRPFTVGRCRVIPQIIQILHGNTVSHAAIAWRRAGARPRKGVRNYLGLIAAICAFGLDGATASHFLHPVGLKLAAIIVQR
VQGLAVKVIVAASAVGAAAVLGLGFVFGPMLMSSSESATAAVSKPVPTISAPATGAVQVAQANVPAKLPISSDASSNPFF
SSAFPPGAANPNPVAMLGPSAPPPVEASAPKGPAAYRQANVDGPYIALTFDDGPSPETTPKLLKILEERHIKATFFMLGQ
NVAANPEVVRAVAAGGNEIGSHSWNHPQLPKIPVAAADKQLEDTSDAIFNVTGRRPIYLRPPYGAMTKSLEAHIEQKYGL
SLIFWSVDPLDWKIRDSQSVYDQIMKQVRPGAIILSHDIHPTTVAAMPRVIDTLLAKGYKFVTVSELIAMNKPAPPKPVA
AAAPPGAVQQRKKPKQTAQNTPAGQAKPAVATRPAPAPSPASATVPGEPMTIRPGGTVGIY
>Mature_461_residues
MRPFTVGRCRVIPQIIQILHGNTVSHAAIAWRRAGARPRKGVRNYLGLIAAICAFGLDGATASHFLHPVGLKLAAIIVQR
VQGLAVKVIVAASAVGAAAVLGLGFVFGPMLMSSSESATAAVSKPVPTISAPATGAVQVAQANVPAKLPISSDASSNPFF
SSAFPPGAANPNPVAMLGPSAPPPVEASAPKGPAAYRQANVDGPYIALTFDDGPSPETTPKLLKILEERHIKATFFMLGQ
NVAANPEVVRAVAAGGNEIGSHSWNHPQLPKIPVAAADKQLEDTSDAIFNVTGRRPIYLRPPYGAMTKSLEAHIEQKYGL
SLIFWSVDPLDWKIRDSQSVYDQIMKQVRPGAIILSHDIHPTTVAAMPRVIDTLLAKGYKFVTVSELIAMNKPAPPKPVA
AAAPPGAVQQRKKPKQTAQNTPAGQAKPAVATRPAPAPSPASATVPGEPMTIRPGGTVGIY

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=192, Percent_Identity=32.8125, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6323339, Length=167, Percent_Identity=34.1317365269461, Blast_Score=93, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 48190; Mature: 48190

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPFTVGRCRVIPQIIQILHGNTVSHAAIAWRRAGARPRKGVRNYLGLIAAICAFGLDGA
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
TASHFLHPVGLKLAAIIVQRVQGLAVKVIVAASAVGAAAVLGLGFVFGPMLMSSSESATA
CHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AVSKPVPTISAPATGAVQVAQANVPAKLPISSDASSNPFFSSAFPPGAANPNPVAMLGPS
HHCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
APPPVEASAPKGPAAYRQANVDGPYIALTFDDGPSPETTPKLLKILEERHIKATFFMLGQ
CCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEEECC
NVAANPEVVRAVAAGGNEIGSHSWNHPQLPKIPVAAADKQLEDTSDAIFNVTGRRPIYLR
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCEEEECCCCEEEEE
PPYGAMTKSLEAHIEQKYGLSLIFWSVDPLDWKIRDSQSVYDQIMKQVRPGAIILSHDIH
CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCC
PTTVAAMPRVIDTLLAKGYKFVTVSELIAMNKPAPPKPVAAAAPPGAVQQRKKPKQTAQN
CHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCC
TPAGQAKPAVATRPAPAPSPASATVPGEPMTIRPGGTVGIY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRPFTVGRCRVIPQIIQILHGNTVSHAAIAWRRAGARPRKGVRNYLGLIAAICAFGLDGA
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
TASHFLHPVGLKLAAIIVQRVQGLAVKVIVAASAVGAAAVLGLGFVFGPMLMSSSESATA
CHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AVSKPVPTISAPATGAVQVAQANVPAKLPISSDASSNPFFSSAFPPGAANPNPVAMLGPS
HHCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
APPPVEASAPKGPAAYRQANVDGPYIALTFDDGPSPETTPKLLKILEERHIKATFFMLGQ
CCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEEECC
NVAANPEVVRAVAAGGNEIGSHSWNHPQLPKIPVAAADKQLEDTSDAIFNVTGRRPIYLR
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCEEEECCCCEEEEE
PPYGAMTKSLEAHIEQKYGLSLIFWSVDPLDWKIRDSQSVYDQIMKQVRPGAIILSHDIH
CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCC
PTTVAAMPRVIDTLLAKGYKFVTVSELIAMNKPAPPKPVAAAAPPGAVQQRKKPKQTAQN
CHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCC
TPAGQAKPAVATRPAPAPSPASATVPGEPMTIRPGGTVGIY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]