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The map label for this gene is araC [C]

Identifier: 158424330

GI number: 158424330

Start: 3069635

End: 3070372

Strand: Reverse

Name: araC [C]

Synonym: AZC_2706

Alternate gene names: 158424330

Gene position: 3070372-3069635 (Counterclockwise)

Preceding gene: 158424331

Following gene: 158424329

Centisome position: 57.18

GC content: 70.05

Gene sequence:

>738_bases
ATGTCCATCCAGCTTGAGATTCGCTCCTACAGCGGTGCCGGGCGCCACACGCACGATTATGTGCAGGTGCTCGTCCCCAT
GCGTGGGGCCATGCAGCTGGACGTGGAAGGGCAGGTGGATGTGGTCGCGAGCCAGTGTGTCGCGGTCATCCCGAGCCTTC
ATGCTCATGATTTCGCGCCAAGCCGCGATTGCAGTCTGATGGTGCTGGATGTGGAGCGGGCCGCCCTTGCCGAAGCAGCG
CCCCGGCTGGTGGATACACGCGTCCCGCTGGTCTCCCGGCTCGATCCCTTCGCGTGGCGCCTGTTCCATCTGCTCGGTGC
CGAGATTGGGCAGAATGCACGGCGGGCGCGGGACGCGGCGCCGCTGGCGCTGGCGGGCCTCCGCCTCGTCGCGCCGCGGC
CGGGACATCGGCGCGACGCCGCCGCCCGGGTGACCGAGTTTGCCAAAGGCTGCATGGCCGGCCAGCGGGTGCCCGTAGCC
GAGATGGCGGAGGGGGCAGGGCTCGGCCAGAGCCAGTTCCACGCCGTGTTCCGCGCCACCACCGGGCAGTCGCCGAAGCA
GTATCAGCTCGCGCGCAGCTTCGAGCGGGCGGCGGATCTGCTGGCGTCGACGGACGAGCCGGTCGCGGAGATCGCCTATC
GGCTCGGCTACCAGAACGCCTCGTCCTTCAACCGCCAGTTCAAGCGCCGCTTCGGCGTGACGCCGTCCGTGTTCCGCGCC
GCCGGCCGGACCGCCTGA

Upstream 100 bases:

>100_bases
GGCACCGTCGGCATCTACTGAGCTGAAACGGGCCGCTTGTGGCGGCCCGTGCCTGTTCTAGACTGGGCGCTTCCGCCTGA
GGCGCAGGCTAGGTCGTTCC

Downstream 100 bases:

>100_bases
GCCGGCAAGTGAGTCCACCGCAGGTTTGGACAAGCCGTCCGCAGGTTCGGCTCATCCCTCCGTGAGCCGCTTCGGCTAAG
GAAGGCACAGACCGGCGCCG

Product: AraC family transcription regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator Protein; AraC-Like Transcriptional Regulator

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSIQLEIRSYSGAGRHTHDYVQVLVPMRGAMQLDVEGQVDVVASQCVAVIPSLHAHDFAPSRDCSLMVLDVERAALAEAA
PRLVDTRVPLVSRLDPFAWRLFHLLGAEIGQNARRARDAAPLALAGLRLVAPRPGHRRDAAARVTEFAKGCMAGQRVPVA
EMAEGAGLGQSQFHAVFRATTGQSPKQYQLARSFERAADLLASTDEPVAEIAYRLGYQNASSFNRQFKRRFGVTPSVFRA
AGRTA

Sequences:

>Translated_245_residues
MSIQLEIRSYSGAGRHTHDYVQVLVPMRGAMQLDVEGQVDVVASQCVAVIPSLHAHDFAPSRDCSLMVLDVERAALAEAA
PRLVDTRVPLVSRLDPFAWRLFHLLGAEIGQNARRARDAAPLALAGLRLVAPRPGHRRDAAARVTEFAKGCMAGQRVPVA
EMAEGAGLGQSQFHAVFRATTGQSPKQYQLARSFERAADLLASTDEPVAEIAYRLGYQNASSFNRQFKRRFGVTPSVFRA
AGRTA
>Mature_244_residues
SIQLEIRSYSGAGRHTHDYVQVLVPMRGAMQLDVEGQVDVVASQCVAVIPSLHAHDFAPSRDCSLMVLDVERAALAEAAP
RLVDTRVPLVSRLDPFAWRLFHLLGAEIGQNARRARDAAPLALAGLRLVAPRPGHRRDAAARVTEFAKGCMAGQRVPVAE
MAEGAGLGQSQFHAVFRATTGQSPKQYQLARSFERAADLLASTDEPVAEIAYRLGYQNASSFNRQFKRRFGVTPSVFRAA
GRTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26662; Mature: 26531

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQLEIRSYSGAGRHTHDYVQVLVPMRGAMQLDVEGQVDVVASQCVAVIPSLHAHDFAP
CEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCCC
SRDCSLMVLDVERAALAEAAPRLVDTRVPLVSRLDPFAWRLFHLLGAEIGQNARRARDAA
CCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHCC
PLALAGLRLVAPRPGHRRDAAARVTEFAKGCMAGQRVPVAEMAEGAGLGQSQFHAVFRAT
CHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHC
TGQSPKQYQLARSFERAADLLASTDEPVAEIAYRLGYQNASSFNRQFKRRFGVTPSVFRA
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
AGRTA
CCCCC
>Mature Secondary Structure 
SIQLEIRSYSGAGRHTHDYVQVLVPMRGAMQLDVEGQVDVVASQCVAVIPSLHAHDFAP
EEEEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCCC
SRDCSLMVLDVERAALAEAAPRLVDTRVPLVSRLDPFAWRLFHLLGAEIGQNARRARDAA
CCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHCC
PLALAGLRLVAPRPGHRRDAAARVTEFAKGCMAGQRVPVAEMAEGAGLGQSQFHAVFRAT
CHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHC
TGQSPKQYQLARSFERAADLLASTDEPVAEIAYRLGYQNASSFNRQFKRRFGVTPSVFRA
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
AGRTA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA