| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424329
Identifier: 158424329
GI number: 158424329
Start: 3068788
End: 3069513
Strand: Reverse
Name: 158424329
Synonym: AZC_2705
Alternate gene names: NA
Gene position: 3069513-3068788 (Counterclockwise)
Preceding gene: 158424330
Following gene: 158424323
Centisome position: 57.16
GC content: 66.53
Gene sequence:
>726_bases ATGCAACTGACCGACTTCACCACGCTCACCTTTGATTGCTACGGCACGCTGATCGACTGGGAGACCGGCATCTGGAACGC CCTCCAGCCGCTGCTGAGCGAGGGGCGCCTGACCATCGGCCGGGAGGAGGCGTTGGAGACCTTCGCCAGGCACGAGACGG AACAGGAGATCGAGACGCCGTCCCTGCGCTATTCGGCGCTGCTGGCTGTCGTCCATGCCCGCCTCGCCCGCGCCTGGGGC CTCCATGTCCATGCGGATCTGCATGAGCGGTTCGGAGCTTCGGTGCCAGACTGGCCGACCTTTCCCGACTCGGCCGCGGC GCTCGCCTATCTGAAGCGCCACTACAAGCTGGTCATCCTCTCCAACGTGGACCGCACCAGCTTTGCCGCCAGCAATCGCA AGCTGGGCGTGGCGTTTGATGCCATCTACACGGCCGAGGACATCGGCTCGTACAAGCCGGACGATCGCAACTTCGCGTTT CTGCTCGCGCATCTCGAGGCCGAACTGGGCGTGAAGCCGGGGCAGGTGCTGCACACGGCTCAGAGCCTGCATCACGACCA TGTGCCGGCGGAGCGGGCCGGGCTGGCGCGAGCCTGGATCGACCGGCGATTCGGACAGTCGGGCAGCGGGGCGACGCTGC CCACCGAGCGACAGCCACAGGTGGACTTCCATTTCCGCACGCTCGGTGAACTCGCCGACGCGCACCGCAAGCTCGTGGCT GGCTGA
Upstream 100 bases:
>100_bases AGGTTTGGACAAGCCGTCCGCAGGTTCGGCTCATCCCTCCGTGAGCCGCTTCGGCTAAGGAAGGCACAGACCGGCGCCGG TGCGCCCTGAGGCCTGATCC
Downstream 100 bases:
>100_bases AGCCGGACGACGGGCTCCGGAAAGCACGACACCCGCGCGCCGGTCAGGCGCGCGGGTGTCGATGTCAAACAAGCTGCCGC GAGGCAGCGGCTCCGGCTTT
Product: hydrolase
Products: NA
Alternate protein names: HAD Family Hydrolase; 2-Haloalkanoic Acid Dehalogenase; HAD-Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; 2-Haloacid Dehalogenase; Haloacid Dehalogenase I; 2-Haloacid Dehalogenase Protein; 2-Haloalkanoic Acid Dehalogenase Protein; Hydrolase Of HAD Superfamily; Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MQLTDFTTLTFDCYGTLIDWETGIWNALQPLLSEGRLTIGREEALETFARHETEQEIETPSLRYSALLAVVHARLARAWG LHVHADLHERFGASVPDWPTFPDSAAALAYLKRHYKLVILSNVDRTSFAASNRKLGVAFDAIYTAEDIGSYKPDDRNFAF LLAHLEAELGVKPGQVLHTAQSLHHDHVPAERAGLARAWIDRRFGQSGSGATLPTERQPQVDFHFRTLGELADAHRKLVA G
Sequences:
>Translated_241_residues MQLTDFTTLTFDCYGTLIDWETGIWNALQPLLSEGRLTIGREEALETFARHETEQEIETPSLRYSALLAVVHARLARAWG LHVHADLHERFGASVPDWPTFPDSAAALAYLKRHYKLVILSNVDRTSFAASNRKLGVAFDAIYTAEDIGSYKPDDRNFAF LLAHLEAELGVKPGQVLHTAQSLHHDHVPAERAGLARAWIDRRFGQSGSGATLPTERQPQVDFHFRTLGELADAHRKLVA G >Mature_241_residues MQLTDFTTLTFDCYGTLIDWETGIWNALQPLLSEGRLTIGREEALETFARHETEQEIETPSLRYSALLAVVHARLARAWG LHVHADLHERFGASVPDWPTFPDSAAALAYLKRHYKLVILSNVDRTSFAASNRKLGVAFDAIYTAEDIGSYKPDDRNFAF LLAHLEAELGVKPGQVLHTAQSLHHDHVPAERAGLARAWIDRRFGQSGSGATLPTERQPQVDFHFRTLGELADAHRKLVA G
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26907; Mature: 26907
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTDFTTLTFDCYGTLIDWETGIWNALQPLLSEGRLTIGREEALETFARHETEQEIETP CCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCEEECHHHHHHHHHHCCCHHHHCCC SLRYSALLAVVHARLARAWGLHVHADLHERFGASVPDWPTFPDSAAALAYLKRHYKLVIL CHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHCEEEEEE SNVDRTSFAASNRKLGVAFDAIYTAEDIGSYKPDDRNFAFLLAHLEAELGVKPGQVLHTA ECCCHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH QSLHHDHVPAERAGLARAWIDRRFGQSGSGATLPTERQPQVDFHFRTLGELADAHRKLVA HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC G C >Mature Secondary Structure MQLTDFTTLTFDCYGTLIDWETGIWNALQPLLSEGRLTIGREEALETFARHETEQEIETP CCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCEEECHHHHHHHHHHCCCHHHHCCC SLRYSALLAVVHARLARAWGLHVHADLHERFGASVPDWPTFPDSAAALAYLKRHYKLVIL CHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHCEEEEEE SNVDRTSFAASNRKLGVAFDAIYTAEDIGSYKPDDRNFAFLLAHLEAELGVKPGQVLHTA ECCCHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH QSLHHDHVPAERAGLARAWIDRRFGQSGSGATLPTERQPQVDFHFRTLGELADAHRKLVA HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA