| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gltI [H]
Identifier: 158424306
GI number: 158424306
Start: 3039635
End: 3040444
Strand: Reverse
Name: gltI [H]
Synonym: AZC_2682
Alternate gene names: 158424306
Gene position: 3040444-3039635 (Counterclockwise)
Preceding gene: 158424310
Following gene: 158424305
Centisome position: 56.62
GC content: 63.21
Gene sequence:
>810_bases ATGCTGAAGTCTTTGCTCGCTGCCGGCGCGATCGCGGTGGCGCTCGCCGGGGCGCTGGTGCCGAAGGCGGCCGAGGCGCG CACGCTCGATGAGATCATGAAGTCCGGCGTCATCCGCGTCGGCGTCAATCCGACCTTGCCGCCGCTCGGCAAGTTCGACG ACAAGAACGAGATCGTCGGTTTCGACGTGGATTATGCGGGCGAGATCGCCAAGCTGCTCGGCGTGAAGCTTGAAGTGGTG CAGGTGGGCTCGCCCGACCGCATTCCCTTCGTCACCGCTGGCAAGATCGACTTCGTCATGGGCGCCATGACGCGCAACAC CGACCGCGCCAAGGTGATCGACTTCACCGTTCCGGTGCACACCGAGGTGCTGGGCGTGCTCACCACCAAGGCCAACACCT TTACTGATTGGCGGCAGTTCGATGATCCGTCCGTCACCTTCGTGCAGGTGCGCGGCTCGACCCCGGTGAAGTTCATCGAG GAGAACCTGCCCAAGGCCAAGGTGACCCTGCTGGACAACTATCCCGACGCGGTGCGCGCGCTGGCTCAGGGCCGTGGCAC GGCGATGATCGACGTGATCGACTTCATGGGCGAGCACATGTCCAAGCACAAGGTGGACTGGCGTATCGTGGAGACGCCCA TCGACGTCTATTACTGCAGCCTCGGCGTCGCGAAGGGCTCCACGGGCCTCAAGGACTGGCTGAACGTTGCGATTTTCGAC CTGTATCGCAAGGGCAAGACCGAGGCGCTCTGGAAGAAGTGGTTCGGCATGGACATGATCAAGCCCGTGGGCGCCCAGCC GTTCTTCTGA
Upstream 100 bases:
>100_bases TTTACAGACAGTGAGTTTGTATACAAATTGTCCACCGTTTGGCAACGGGAAGTCGCAAAACAGGCGACGCCGGCCGGGAC CCAGAGGTTGGAGAACACGC
Downstream 100 bases:
>100_bases TCTGACCGCTCTCCCGTCCCGGGCCAGCGCCTTGCGCTGGCCCTTCATCCTGCCGACGCGGTTCCATGTCCTATACGCTG CAGTTCGGCCAGATCTGGCC
Product: extracellular substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MLKSLLAAGAIAVALAGALVPKAAEARTLDEIMKSGVIRVGVNPTLPPLGKFDDKNEIVGFDVDYAGEIAKLLGVKLEVV QVGSPDRIPFVTAGKIDFVMGAMTRNTDRAKVIDFTVPVHTEVLGVLTTKANTFTDWRQFDDPSVTFVQVRGSTPVKFIE ENLPKAKVTLLDNYPDAVRALAQGRGTAMIDVIDFMGEHMSKHKVDWRIVETPIDVYYCSLGVAKGSTGLKDWLNVAIFD LYRKGKTEALWKKWFGMDMIKPVGAQPFF
Sequences:
>Translated_269_residues MLKSLLAAGAIAVALAGALVPKAAEARTLDEIMKSGVIRVGVNPTLPPLGKFDDKNEIVGFDVDYAGEIAKLLGVKLEVV QVGSPDRIPFVTAGKIDFVMGAMTRNTDRAKVIDFTVPVHTEVLGVLTTKANTFTDWRQFDDPSVTFVQVRGSTPVKFIE ENLPKAKVTLLDNYPDAVRALAQGRGTAMIDVIDFMGEHMSKHKVDWRIVETPIDVYYCSLGVAKGSTGLKDWLNVAIFD LYRKGKTEALWKKWFGMDMIKPVGAQPFF >Mature_269_residues MLKSLLAAGAIAVALAGALVPKAAEARTLDEIMKSGVIRVGVNPTLPPLGKFDDKNEIVGFDVDYAGEIAKLLGVKLEVV QVGSPDRIPFVTAGKIDFVMGAMTRNTDRAKVIDFTVPVHTEVLGVLTTKANTFTDWRQFDDPSVTFVQVRGSTPVKFIE ENLPKAKVTLLDNYPDAVRALAQGRGTAMIDVIDFMGEHMSKHKVDWRIVETPIDVYYCSLGVAKGSTGLKDWLNVAIFD LYRKGKTEALWKKWFGMDMIKPVGAQPFF
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=243, Percent_Identity=29.2181069958848, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788228, Length=257, Percent_Identity=28.4046692607004, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787088, Length=253, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787085, Length=222, Percent_Identity=25.6756756756757, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787031, Length=259, Percent_Identity=25.0965250965251, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29504; Mature: 29504
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSLLAAGAIAVALAGALVPKAAEARTLDEIMKSGVIRVGVNPTLPPLGKFDDKNEIVG CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEE FDVDYAGEIAKLLGVKLEVVQVGSPDRIPFVTAGKIDFVMGAMTRNTDRAKVIDFTVPVH ECCCHHHHHHHHHCCEEEEEEECCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEECCHH TEVLGVLTTKANTFTDWRQFDDPSVTFVQVRGSTPVKFIEENLPKAKVTLLDNYPDAVRA HHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCEEEEEECCCCHHHHH LAQGRGTAMIDVIDFMGEHMSKHKVDWRIVETPIDVYYCSLGVAKGSTGLKDWLNVAIFD HHCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHH LYRKGKTEALWKKWFGMDMIKPVGAQPFF HHHCCCHHHHHHHHHCCHHHCCCCCCCCC >Mature Secondary Structure MLKSLLAAGAIAVALAGALVPKAAEARTLDEIMKSGVIRVGVNPTLPPLGKFDDKNEIVG CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEE FDVDYAGEIAKLLGVKLEVVQVGSPDRIPFVTAGKIDFVMGAMTRNTDRAKVIDFTVPVH ECCCHHHHHHHHHCCEEEEEEECCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEECCHH TEVLGVLTTKANTFTDWRQFDDPSVTFVQVRGSTPVKFIEENLPKAKVTLLDNYPDAVRA HHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCEEEEEECCCCHHHHH LAQGRGTAMIDVIDFMGEHMSKHKVDWRIVETPIDVYYCSLGVAKGSTGLKDWLNVAIFD HHCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHH LYRKGKTEALWKKWFGMDMIKPVGAQPFF HHHCCCHHHHHHHHHCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]