| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yajO [H]
Identifier: 158424288
GI number: 158424288
Start: 3018210
End: 3019283
Strand: Direct
Name: yajO [H]
Synonym: AZC_2664
Alternate gene names: 158424288
Gene position: 3018210-3019283 (Clockwise)
Preceding gene: 158424287
Following gene: 158424289
Centisome position: 56.21
GC content: 67.23
Gene sequence:
>1074_bases ATGGTCCAGTATCGCTATCTCGGCCGCAGTGCCCTCAAGGTGTCCCCGCTCGCGCTCGGCACCATGATGTTCGGCGGCCC CACCGACGAGCCCACCGCCCACCGCATCATCGCCAAGGCGAAGGATCAGGGCTTCAATTTCATCGACACCGCCGACGGCT ATCAGAAGGGCCAGTCGGAAGTGGTGGTGGGCAACGCCATCCGATCAGACCGCGATTACTGGGTGCTGGCCACCAAGTTC GCCAACAACCACGGCATCGGCCCCAACCGGGGCGGCATCTCGCGCAAGTGGATCACCGAGACGGTGGAGAACAGCCTGCG CCGGCTCGGTACGGACTATATCGACATCCTCTATTTCCACCGCTCGCCCTTCGAGCAGCCACTGGGCGAGGCGGTGCGCG CCATCGCCGATCTCATCCGCGCCGGCAAGCTGCGCTATTTCGGTGTGTCCAACTTCCGCGGCTGGCGCATCGCCGAAGTG GCCAATCTGGCGGATGAGTTCGGCATCGACCGCCCGGTGGCGAGCCAGCCGCTATACAACATCGTCAACCGTTCAGCCGA GGCCGAGGAACTGCCCGCCGCCGCCCACTACGGCCTCGGCATCGTGCCCTATTCGCCGCTGGCGCGCGGCGTGCTTACCG GCAAATACGCCCCTGACGCCGCCCCCGAGGCCGACAGCCGCGCCGGGCGCAACGACAAGCGCATCTACGAGACCGAATGG CGGCCGGAATCGCTGGCGGTCGCCGCCGAGATCAAGCGCCATGCGGAAGCGCGAGGGATTTCTGCCGCGGATTTCGCTCT TGCGTGGGTGCTCAACAACAAACTGGTGACCGCGCCCATCGCCGGCCCGCGCACGGAAGCCCATTGGGACAACTACGTCC GCGCCCTCGACTATCGCTTCACCGCGGAGGATGAGGCGCTGGTGGATCGCCTCGTGCGCGAGGGTCATCCCTCGACGCCC GGTTTCACCGACCCGAGCCATCCCATCGAAGGCCGCGTGCCCTGGACCGGCGGCGTTCCTGCCGCCGCCAAGGTCGAGGC ACGCGCGCCCGTGGTGCTGGCCAAGGCCGGCTGA
Upstream 100 bases:
>100_bases TGGCGGAGGAGCCGGCCCTGCGCGCCGCATCCTCCGGCCATGCGGTGGCCTGCCACCACGCGGACGTGCCCCCGCTTCAC TGATCCCTCAAGGAGACCTC
Downstream 100 bases:
>100_bases AAGCCGCCGCCGGCATGAACCGGGGGCAATTGCCGGCGGCGGCCCCCTTTCCCGATCCCGTCCGTTTTAAAGGAATGCCG TCATGAGCCTCGTCCTAACC
Product: oxido-reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MVQYRYLGRSALKVSPLALGTMMFGGPTDEPTAHRIIAKAKDQGFNFIDTADGYQKGQSEVVVGNAIRSDRDYWVLATKF ANNHGIGPNRGGISRKWITETVENSLRRLGTDYIDILYFHRSPFEQPLGEAVRAIADLIRAGKLRYFGVSNFRGWRIAEV ANLADEFGIDRPVASQPLYNIVNRSAEAEELPAAAHYGLGIVPYSPLARGVLTGKYAPDAAPEADSRAGRNDKRIYETEW RPESLAVAAEIKRHAEARGISAADFALAWVLNNKLVTAPIAGPRTEAHWDNYVRALDYRFTAEDEALVDRLVREGHPSTP GFTDPSHPIEGRVPWTGGVPAAAKVEARAPVVLAKAG
Sequences:
>Translated_357_residues MVQYRYLGRSALKVSPLALGTMMFGGPTDEPTAHRIIAKAKDQGFNFIDTADGYQKGQSEVVVGNAIRSDRDYWVLATKF ANNHGIGPNRGGISRKWITETVENSLRRLGTDYIDILYFHRSPFEQPLGEAVRAIADLIRAGKLRYFGVSNFRGWRIAEV ANLADEFGIDRPVASQPLYNIVNRSAEAEELPAAAHYGLGIVPYSPLARGVLTGKYAPDAAPEADSRAGRNDKRIYETEW RPESLAVAAEIKRHAEARGISAADFALAWVLNNKLVTAPIAGPRTEAHWDNYVRALDYRFTAEDEALVDRLVREGHPSTP GFTDPSHPIEGRVPWTGGVPAAAKVEARAPVVLAKAG >Mature_357_residues MVQYRYLGRSALKVSPLALGTMMFGGPTDEPTAHRIIAKAKDQGFNFIDTADGYQKGQSEVVVGNAIRSDRDYWVLATKF ANNHGIGPNRGGISRKWITETVENSLRRLGTDYIDILYFHRSPFEQPLGEAVRAIADLIRAGKLRYFGVSNFRGWRIAEV ANLADEFGIDRPVASQPLYNIVNRSAEAEELPAAAHYGLGIVPYSPLARGVLTGKYAPDAAPEADSRAGRNDKRIYETEW RPESLAVAAEIKRHAEARGISAADFALAWVLNNKLVTAPIAGPRTEAHWDNYVRALDYRFTAEDEALVDRLVREGHPSTP GFTDPSHPIEGRVPWTGGVPAAAKVEARAPVVLAKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=294, Percent_Identity=33.6734693877551, Blast_Score=151, Evalue=8e-37, Organism=Homo sapiens, GI27436962, Length=292, Percent_Identity=33.9041095890411, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI27436969, Length=290, Percent_Identity=34.4827586206897, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI4504825, Length=290, Percent_Identity=34.4827586206897, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI27436966, Length=292, Percent_Identity=33.5616438356164, Blast_Score=148, Evalue=6e-36, Organism=Homo sapiens, GI27436971, Length=304, Percent_Identity=31.5789473684211, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI223718702, Length=223, Percent_Identity=30.9417040358744, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI41152114, Length=205, Percent_Identity=33.1707317073171, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI41327764, Length=203, Percent_Identity=32.0197044334975, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI223718708, Length=161, Percent_Identity=29.8136645962733, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI87081735, Length=312, Percent_Identity=35.8974358974359, Blast_Score=182, Evalue=4e-47, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=31.9148936170213, Blast_Score=148, Evalue=5e-37, Organism=Escherichia coli, GI1789199, Length=333, Percent_Identity=30.6306306306306, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=29.5031055900621, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788081, Length=284, Percent_Identity=32.0422535211268, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787674, Length=321, Percent_Identity=23.6760124610592, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI212645785, Length=322, Percent_Identity=23.2919254658385, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=331, Percent_Identity=30.5135951661631, Blast_Score=152, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6323998, Length=327, Percent_Identity=27.5229357798165, Blast_Score=118, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6319958, Length=308, Percent_Identity=26.2987012987013, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=232, Percent_Identity=30.6034482758621, Blast_Score=104, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6322615, Length=256, Percent_Identity=26.5625, Blast_Score=95, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6321052, Length=156, Percent_Identity=33.974358974359, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640980, Length=347, Percent_Identity=23.9193083573487, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI45549126, Length=347, Percent_Identity=23.9193083573487, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646155, Length=281, Percent_Identity=26.3345195729537, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24646159, Length=283, Percent_Identity=25.0883392226148, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39146; Mature: 39146
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQYRYLGRSALKVSPLALGTMMFGGPTDEPTAHRIIAKAKDQGFNFIDTADGYQKGQSE CCEEEECCCCCEEECHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCEEECCCCHHCCCCC VVVGNAIRSDRDYWVLATKFANNHGIGPNRGGISRKWITETVENSLRRLGTDYIDILYFH EEEEHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC RSPFEQPLGEAVRAIADLIRAGKLRYFGVSNFRGWRIAEVANLADEFGIDRPVASQPLYN CCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHH IVNRSAEAEELPAAAHYGLGIVPYSPLARGVLTGKYAPDAAPEADSRAGRNDKRIYETEW HHCCCCCHHHCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEECCC RPESLAVAAEIKRHAEARGISAADFALAWVLNNKLVTAPIAGPRTEAHWDNYVRALDYRF CCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCEEEECCCCCCCHHHHHHHHHHHHEEE TAEDEALVDRLVREGHPSTPGFTDPSHPIEGRVPWTGGVPAAAKVEARAPVVLAKAG CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECC >Mature Secondary Structure MVQYRYLGRSALKVSPLALGTMMFGGPTDEPTAHRIIAKAKDQGFNFIDTADGYQKGQSE CCEEEECCCCCEEECHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCEEECCCCHHCCCCC VVVGNAIRSDRDYWVLATKFANNHGIGPNRGGISRKWITETVENSLRRLGTDYIDILYFH EEEEHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC RSPFEQPLGEAVRAIADLIRAGKLRYFGVSNFRGWRIAEVANLADEFGIDRPVASQPLYN CCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHH IVNRSAEAEELPAAAHYGLGIVPYSPLARGVLTGKYAPDAAPEADSRAGRNDKRIYETEW HHCCCCCHHHCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEECCC RPESLAVAAEIKRHAEARGISAADFALAWVLNNKLVTAPIAGPRTEAHWDNYVRALDYRF CCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCEEEECCCCCCCHHHHHHHHHHHHEEE TAEDEALVDRLVREGHPSTPGFTDPSHPIEGRVPWTGGVPAAAKVEARAPVVLAKAG CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]