The gene/protein map for NC_009937 is currently unavailable.
Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is gsiD [H]

Identifier: 158424252

GI number: 158424252

Start: 2963830

End: 2964732

Strand: Direct

Name: gsiD [H]

Synonym: AZC_2628

Alternate gene names: 158424252

Gene position: 2963830-2964732 (Clockwise)

Preceding gene: 158424251

Following gene: 158424253

Centisome position: 55.19

GC content: 67.11

Gene sequence:

>903_bases
ATGTCCCAGCCCGCCATCGCCCTCGCCGGCGCCAAGGCCGCCACCAAGGGCAAGCGCCCCGCCACCCGCAGCTTCTGGCG
CAATGTCGGCCGTCGCCTGCTGCGCGACCCGGTGAGCATGGTGTGCCTCACCCTCCTGCTGCTGATCGTGCTCGCGGCAA
TCTTCGCCCCCTATGTGGCCCCGCACGATCCCTATCGCACCAGCATGGCCCGCCGCCTGATCGCGCCGGGCGATGCGCGC
TATTGGCTGGGCACGGACGAGCTCGGCCGCGATCTGCTGTCGCGCCTCATCTATGGCGGCCGACTCTCGCTCTTCATGGG
CTTCGCCCCGGTGCTGATTGCCACCGCCATCGGCGGCCTGCTCGGCATCATCGCGGGTTATGTCGGCGGAGCGCTCAACA
TGCTGATCATGCGCGTGATCGACGTGTTCTATGCCTTCCCGTCCGTGCTGCTGGCAGTCGCCATCTCCGGGGTGCTCGGG
GCAGGCATCGGCAACACCATCTTCTCGTTGACGCTGGTCTTCATTCCGCCCGTTGCCCGCGTGGCCGAAAGCGTGGCGAC
CCAGATGCGCAACCAGGATTTCGTCGAGGCCGCCCGCGCCACCGGGGCCGCCAACTGGCGCATCGTCCTCGCCCATGTGG
TGCCCAACGTCACGGGCCCCATCCTGAGCTACGCCTCAAGCCTCATCAGCGTCTCCATCGTGCTCGCCGCCGGTCTCTCC
TTCCTCGGCCTCGGCATCACGCCGCCGGAGCCGGAATGGGGCCTGATGCTGAACACGCTGCGCCAGTCCATCTATGTGGC
GCCGCTCAACGCCATCCTGCCGGGTGTGATGATCTTCATCACCTCCATGTGCTTCAACCTCATGAGCGACGGCCTGCGCA
GCGCCATGGACGTGAAGCAGTGA

Upstream 100 bases:

>100_bases
CTCGTGCTGGCGATGTTCTTCGTGCTCATCAATCTCGCCGTCGACGTGGTGCAGACCGCCGTCGATCCCCGCATCAAGCG
CGCCTGAGGGAGAGCCACCC

Downstream 100 bases:

>100_bases
GGGCATCCGCATGACCCCCTCCCCCCTTTCCCCGAAACACGGTGTCGCCATGGCCGCCATTCCCAACGACGTCGATCCGC
GCGATCGCGGCGGCCCCGCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSQPAIALAGAKAATKGKRPATRSFWRNVGRRLLRDPVSMVCLTLLLLIVLAAIFAPYVAPHDPYRTSMARRLIAPGDAR
YWLGTDELGRDLLSRLIYGGRLSLFMGFAPVLIATAIGGLLGIIAGYVGGALNMLIMRVIDVFYAFPSVLLAVAISGVLG
AGIGNTIFSLTLVFIPPVARVAESVATQMRNQDFVEAARATGAANWRIVLAHVVPNVTGPILSYASSLISVSIVLAAGLS
FLGLGITPPEPEWGLMLNTLRQSIYVAPLNAILPGVMIFITSMCFNLMSDGLRSAMDVKQ

Sequences:

>Translated_300_residues
MSQPAIALAGAKAATKGKRPATRSFWRNVGRRLLRDPVSMVCLTLLLLIVLAAIFAPYVAPHDPYRTSMARRLIAPGDAR
YWLGTDELGRDLLSRLIYGGRLSLFMGFAPVLIATAIGGLLGIIAGYVGGALNMLIMRVIDVFYAFPSVLLAVAISGVLG
AGIGNTIFSLTLVFIPPVARVAESVATQMRNQDFVEAARATGAANWRIVLAHVVPNVTGPILSYASSLISVSIVLAAGLS
FLGLGITPPEPEWGLMLNTLRQSIYVAPLNAILPGVMIFITSMCFNLMSDGLRSAMDVKQ
>Mature_299_residues
SQPAIALAGAKAATKGKRPATRSFWRNVGRRLLRDPVSMVCLTLLLLIVLAAIFAPYVAPHDPYRTSMARRLIAPGDARY
WLGTDELGRDLLSRLIYGGRLSLFMGFAPVLIATAIGGLLGIIAGYVGGALNMLIMRVIDVFYAFPSVLLAVAISGVLGA
GIGNTIFSLTLVFIPPVARVAESVATQMRNQDFVEAARATGAANWRIVLAHVVPNVTGPILSYASSLISVSIVLAAGLSF
LGLGITPPEPEWGLMLNTLRQSIYVAPLNAILPGVMIFITSMCFNLMSDGLRSAMDVKQ

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=282, Percent_Identity=40.7801418439716, Blast_Score=224, Evalue=4e-60,
Organism=Escherichia coli, GI1787760, Length=289, Percent_Identity=34.9480968858132, Blast_Score=180, Evalue=8e-47,
Organism=Escherichia coli, GI1789889, Length=242, Percent_Identity=39.2561983471074, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1789964, Length=253, Percent_Identity=41.501976284585, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1787549, Length=286, Percent_Identity=33.2167832167832, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1787498, Length=279, Percent_Identity=34.0501792114695, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1788505, Length=234, Percent_Identity=28.2051282051282, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31955; Mature: 31823

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPAIALAGAKAATKGKRPATRSFWRNVGRRLLRDPVSMVCLTLLLLIVLAAIFAPYVA
CCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
PHDPYRTSMARRLIAPGDARYWLGTDELGRDLLSRLIYGGRLSLFMGFAPVLIATAIGGL
CCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LGIIAGYVGGALNMLIMRVIDVFYAFPSVLLAVAISGVLGAGIGNTIFSLTLVFIPPVAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH
VAESVATQMRNQDFVEAARATGAANWRIVLAHVVPNVTGPILSYASSLISVSIVLAAGLS
HHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FLGLGITPPEPEWGLMLNTLRQSIYVAPLNAILPGVMIFITSMCFNLMSDGLRSAMDVKQ
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQPAIALAGAKAATKGKRPATRSFWRNVGRRLLRDPVSMVCLTLLLLIVLAAIFAPYVA
CCCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]