| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is pgl [H]
Identifier: 158424244
GI number: 158424244
Start: 2953832
End: 2954029
Strand: Reverse
Name: pgl [H]
Synonym: AZC_2620
Alternate gene names: 158424244
Gene position: 2954029-2953832 (Counterclockwise)
Preceding gene: 158424246
Following gene: 158424237
Centisome position: 55.01
GC content: 62.12
Gene sequence:
>198_bases GTGGGCAATTTCGCCACCGAGACCCAACCACGCGGCTTCGCCATCGATCCGCTGGGGCGCTATCTGATCGCGGCGGGCCA GAAATCCAATGCCGCCACCATCTATGCCATCAACCCCGAGAGCGGGGCGCTGAAGGCCATTGGTCGGCAGGAACTTGGCA AGAACCCCAACTGGGTCGAGATCGTCAACTTGCCCTGA
Upstream 100 bases:
>100_bases CACAGTCAGGGCATCGAGACATCGCCAAATCCTCGCGGATTTGGTCCAGCTTCGATAGGCATTACCATGCGGTGAATGGT GAGACGGGGCACTGACGCCT
Downstream 100 bases:
>100_bases GGCCTTGGCCGGGGCGCGGCCAACCGCGCCCCGGCTTTCACACCACCGGCGTCGGCAGCGCCCGCCCGGCGAAGTGGGCA TCGAGATTGGCGATCACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: 6-P-gluconolactonase [H]
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MGNFATETQPRGFAIDPLGRYLIAAGQKSNAATIYAINPESGALKAIGRQELGKNPNWVEIVNLP
Sequences:
>Translated_65_residues MGNFATETQPRGFAIDPLGRYLIAAGQKSNAATIYAINPESGALKAIGRQELGKNPNWVEIVNLP >Mature_64_residues GNFATETQPRGFAIDPLGRYLIAAGQKSNAATIYAINPESGALKAIGRQELGKNPNWVEIVNLP
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1786983, Length=58, Percent_Identity=55.1724137931034, Blast_Score=65, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR011045 - InterPro: IPR015943 [H]
Pfam domain/function: PF10282 DUF2394 [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 6955; Mature: 6824
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNFATETQPRGFAIDPLGRYLIAAGQKSNAATIYAINPESGALKAIGRQELGKNPNWVE CCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEECCCCCCEEECCHHHCCCCCCEEE IVNLP EEECC >Mature Secondary Structure GNFATETQPRGFAIDPLGRYLIAAGQKSNAATIYAINPESGALKAIGRQELGKNPNWVE CCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEECCCCCCEEECCHHHCCCCCCEEE IVNLP EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA