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The map label for this gene is yecS [H]

Identifier: 158424241

GI number: 158424241

Start: 2951473

End: 2952132

Strand: Direct

Name: yecS [H]

Synonym: AZC_2617

Alternate gene names: 158424241

Gene position: 2951473-2952132 (Clockwise)

Preceding gene: 158424240

Following gene: 158424242

Centisome position: 54.96

GC content: 62.88

Gene sequence:

>660_bases
ATGCTTGTCCGCTCCTTCGGTCTCAACGACTTCATCTTCCTGCTGGAGAGCCTGCGCTGGACGCTGGTGCTCACGGCCAT
CGCGCTGACGCTGGGCGGCATCGCCGGACTGTTCATTGCGCTCGCCCGCGTGTCGCCGCTGATGCCGCTGCGACTCGCCA
CCGCCGCCTACATCCAGATCATCCAGGGCTCCCCGGTCCTGATGATCCTCTTCCTGTCCTATTACGGACTGAGCCTCATC
GGCTTCCAGTTGCCCGCCCTCGTTGCCGCCAGCATCTCCATGAGTATCTATGTGAGCGGCTATCTCGGCGACATCTGGCG
CGGCTGCATCGAGGCGGTGCCGAAGCCGCAATGGGAAGCGTCCGAATGCCTCGGCATGACGCGGGTCCAGCAGTTCCGGC
ACATCATCCTGCCGCAGGCCCTGCGCATCGCGCTGCCGCCCACCACCGGCTTTGCGGTGCAGGTGGTGAAGAACACCTCC
ATCACCTCCATCATCGGCTTCGTGGAACTCTCCCGCGCCGGCCAGCTCATCAACAACTCGACGTTCCAGCCCTTCCGCGT
CTTCCTGACGGTTGCGGCCATCTATTTCGTCATCTGCTACCCCCTGTCCCGCCTGTCGGGCTGGCTCGAGAGGAAGTTAA
ATGTCGGAAGTTCTCATTGA

Upstream 100 bases:

>100_bases
GTCCATGGTCCTGCGGGGCATCTTTGCCCTCGTCGGCTGGTACCTGTTCAAGCGCCGGCCGAAGCTGAAGCTGGCCCCGG
CCGTGGAAGGAGCCTGAGCC

Downstream 100 bases:

>100_bases
GAACGTGCACAAGAGCTTCGGTGCGGTCGAGGTTCTGAAGGGCGTCTCTCTCACCGTCGAACGCGGCCAGGTGGTCGCCC
TCATCGGCCGCTCGGGCTCC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLVRSFGLNDFIFLLESLRWTLVLTAIALTLGGIAGLFIALARVSPLMPLRLATAAYIQIIQGSPVLMILFLSYYGLSLI
GFQLPALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEASECLGMTRVQQFRHIILPQALRIALPPTTGFAVQVVKNTS
ITSIIGFVELSRAGQLINNSTFQPFRVFLTVAAIYFVICYPLSRLSGWLERKLNVGSSH

Sequences:

>Translated_219_residues
MLVRSFGLNDFIFLLESLRWTLVLTAIALTLGGIAGLFIALARVSPLMPLRLATAAYIQIIQGSPVLMILFLSYYGLSLI
GFQLPALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEASECLGMTRVQQFRHIILPQALRIALPPTTGFAVQVVKNTS
ITSIIGFVELSRAGQLINNSTFQPFRVFLTVAAIYFVICYPLSRLSGWLERKLNVGSSH
>Mature_219_residues
MLVRSFGLNDFIFLLESLRWTLVLTAIALTLGGIAGLFIALARVSPLMPLRLATAAYIQIIQGSPVLMILFLSYYGLSLI
GFQLPALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEASECLGMTRVQQFRHIILPQALRIALPPTTGFAVQVVKNTS
ITSIIGFVELSRAGQLINNSTFQPFRVFLTVAAIYFVICYPLSRLSGWLERKLNVGSSH

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=36.7149758454106, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=28.0193236714976, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787030, Length=204, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=29.9065420560748, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788645, Length=203, Percent_Identity=28.0788177339901, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=25.1101321585903, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=32.089552238806, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=26.7942583732057, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786874, Length=210, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=27.6995305164319, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24082; Mature: 24082

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRSFGLNDFIFLLESLRWTLVLTAIALTLGGIAGLFIALARVSPLMPLRLATAAYIQI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IQGSPVLMILFLSYYGLSLIGFQLPALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCCCH
SECLGMTRVQQFRHIILPQALRIALPPTTGFAVQVVKNTSITSIIGFVELSRAGQLINNS
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCC
TFQPFRVFLTVAAIYFVICYPLSRLSGWLERKLNVGSSH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLVRSFGLNDFIFLLESLRWTLVLTAIALTLGGIAGLFIALARVSPLMPLRLATAAYIQI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IQGSPVLMILFLSYYGLSLIGFQLPALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCCCH
SECLGMTRVQQFRHIILPQALRIALPPTTGFAVQVVKNTSITSIIGFVELSRAGQLINNS
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCC
TFQPFRVFLTVAAIYFVICYPLSRLSGWLERKLNVGSSH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]