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The map label for this gene is occM [H]

Identifier: 158424240

GI number: 158424240

Start: 2950765

End: 2951469

Strand: Direct

Name: occM [H]

Synonym: AZC_2616

Alternate gene names: 158424240

Gene position: 2950765-2951469 (Clockwise)

Preceding gene: 158424239

Following gene: 158424241

Centisome position: 54.95

GC content: 62.84

Gene sequence:

>705_bases
GTGATCGTGAATTATCAGTTCCAGTTCGGGGTCATCGCCAATTACCGCGATGAACTCCTCAGCGGGCTTTTGCTCACAAT
CCAGCTGTCTGTCAGCTCGATCGTGCTCGGCCTCGCCCTCGGCATCATGCTGGCCTCCGTCCGCGCCATGTATGGCGGGC
TGATCGGACGCATCATCAAGCTCTATGTGGAAGTGGTGCGCAACACGCCCTTCCTGGTGCAGCTCTTCATCATCTTCTTC
GGCCTGCCGGTGCTGGGCGTGCGGGTGGACGCCACCGCAGCGGCGCTCATCGGCATGACCATCAATCTCGGCGCCTACAC
CACCGAGATCATCCGCGCCGGGATCGATGCCGTCCACCGCTCGCAGGTGGAGGCGGGACAGTCCCTCGGCATGACCACCT
ACCAGATCTACCGGCACATCATCATCCCGCCGGCGATCGCCAAGGTGTATCCGGCGCTGTGCAGCCAGTTCATCCTGATG
ACGCTCGCCTCGAGCGTGTGCTCGGCCATCTCCGCCGAGGAACTGTCCTCGGTCACCGCGCAGATCGAGAGCCAGTCCTA
CCGGAGCTTCGAGGTCTATGTGATCGCGACGCTCATCTATCTGGCGCTGTCCATGGTCCTGCGGGGCATCTTTGCCCTCG
TCGGCTGGTACCTGTTCAAGCGCCGGCCGAAGCTGAAGCTGGCCCCGGCCGTGGAAGGAGCCTGA

Upstream 100 bases:

>100_bases
TGATCCGATCAGACTGCGATGCAATCTGATCGGCGCGGGCTCTGGCCATCGACCGCCCACAGGGCGCGGACTTCAGGGTC
GCGCCTGATCCCTCAAGGGG

Downstream 100 bases:

>100_bases
GCCATGCTTGTCCGCTCCTTCGGTCTCAACGACTTCATCTTCCTGCTGGAGAGCCTGCGCTGGACGCTGGTGCTCACGGC
CATCGCGCTGACGCTGGGCG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MIVNYQFQFGVIANYRDELLSGLLLTIQLSVSSIVLGLALGIMLASVRAMYGGLIGRIIKLYVEVVRNTPFLVQLFIIFF
GLPVLGVRVDATAAALIGMTINLGAYTTEIIRAGIDAVHRSQVEAGQSLGMTTYQIYRHIIIPPAIAKVYPALCSQFILM
TLASSVCSAISAEELSSVTAQIESQSYRSFEVYVIATLIYLALSMVLRGIFALVGWYLFKRRPKLKLAPAVEGA

Sequences:

>Translated_234_residues
MIVNYQFQFGVIANYRDELLSGLLLTIQLSVSSIVLGLALGIMLASVRAMYGGLIGRIIKLYVEVVRNTPFLVQLFIIFF
GLPVLGVRVDATAAALIGMTINLGAYTTEIIRAGIDAVHRSQVEAGQSLGMTTYQIYRHIIIPPAIAKVYPALCSQFILM
TLASSVCSAISAEELSSVTAQIESQSYRSFEVYVIATLIYLALSMVLRGIFALVGWYLFKRRPKLKLAPAVEGA
>Mature_234_residues
MIVNYQFQFGVIANYRDELLSGLLLTIQLSVSSIVLGLALGIMLASVRAMYGGLIGRIIKLYVEVVRNTPFLVQLFIIFF
GLPVLGVRVDATAAALIGMTINLGAYTTEIIRAGIDAVHRSQVEAGQSLGMTTYQIYRHIIIPPAIAKVYPALCSQFILM
TLASSVCSAISAEELSSVTAQIESQSYRSFEVYVIATLIYLALSMVLRGIFALVGWYLFKRRPKLKLAPAVEGA

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=189, Percent_Identity=35.4497354497354, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787030, Length=204, Percent_Identity=29.9019607843137, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788645, Length=203, Percent_Identity=29.5566502463054, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=28.7081339712919, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788646, Length=203, Percent_Identity=26.6009852216749, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1786874, Length=213, Percent_Identity=23.943661971831, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI87082239, Length=185, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787087, Length=232, Percent_Identity=23.2758620689655, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787086, Length=204, Percent_Identity=24.0196078431373, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI48994930, Length=122, Percent_Identity=31.9672131147541, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25531; Mature: 25531

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNYQFQFGVIANYRDELLSGLLLTIQLSVSSIVLGLALGIMLASVRAMYGGLIGRIIK
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYVEVVRNTPFLVQLFIIFFGLPVLGVRVDATAAALIGMTINLGAYTTEIIRAGIDAVHR
HHHHHHHCCHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SQVEAGQSLGMTTYQIYRHIIIPPAIAKVYPALCSQFILMTLASSVCSAISAEELSSVTA
HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIESQSYRSFEVYVIATLIYLALSMVLRGIFALVGWYLFKRRPKLKLAPAVEGA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MIVNYQFQFGVIANYRDELLSGLLLTIQLSVSSIVLGLALGIMLASVRAMYGGLIGRIIK
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYVEVVRNTPFLVQLFIIFFGLPVLGVRVDATAAALIGMTINLGAYTTEIIRAGIDAVHR
HHHHHHHCCHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SQVEAGQSLGMTTYQIYRHIIIPPAIAKVYPALCSQFILMTLASSVCSAISAEELSSVTA
HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIESQSYRSFEVYVIATLIYLALSMVLRGIFALVGWYLFKRRPKLKLAPAVEGA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655707; 1732218 [H]