| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158424232
Identifier: 158424232
GI number: 158424232
Start: 2944361
End: 2944759
Strand: Reverse
Name: 158424232
Synonym: AZC_2608
Alternate gene names: NA
Gene position: 2944759-2944361 (Counterclockwise)
Preceding gene: 158424233
Following gene: 158424210
Centisome position: 54.84
GC content: 62.66
Gene sequence:
>399_bases TTGGCAGGCCCTCGCATTTGCCGGAAACTACAGACCGCGCCCGCACAAATGAGAATCGGGCGCCACCTTCTGTCTTCCGG AGTGCGTTTCGTGGCCTTTGCTTGCACCATTCCCGCCGTCCCCACCGTCCAGCAGGATGACGATGCCATCCGCATCACCC GCTGGGATTTCGCGCCTGGCGCCGTCACCGGCTGGCACCGGCACGACTGGCCCTATTTCGTGGTGATGCTCACGGACGGC ATCCTGCGCGTCCACAACGGCACGGACGTCATCGACAATCCGTTGAAGGTTGGCCAGTCCTATGGTCGCAAGGAAGGCAT CACCCACGACGTGATGAACGGCTCGCCGCACCCGATCGCCTTCGTCGAGATCGAGATCAAGAAGCCCGAGGCGCTCTGA
Upstream 100 bases:
>100_bases GCGGCCAAGCCTTGATCAGCGTGTCCTGATCGGCTCGTCCTGATCGGTATCCCGGCGAGGGCCTGATCCCTCGCCGGTCT TTCAGGCCGCGCTTGAGCCA
Downstream 100 bases:
>100_bases TCGCCGGACGGCCGCCTCGTCCGCGGGGCGGTCGATTCCTTGGCGCGCCGTCGTCTGGCGCAGTCAGATTGTCGTGGATT GAATGGTACAGCTGGGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Barrel; Cupin Domain-Containing
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MAGPRICRKLQTAPAQMRIGRHLLSSGVRFVAFACTIPAVPTVQQDDDAIRITRWDFAPGAVTGWHRHDWPYFVVMLTDG ILRVHNGTDVIDNPLKVGQSYGRKEGITHDVMNGSPHPIAFVEIEIKKPEAL
Sequences:
>Translated_132_residues MAGPRICRKLQTAPAQMRIGRHLLSSGVRFVAFACTIPAVPTVQQDDDAIRITRWDFAPGAVTGWHRHDWPYFVVMLTDG ILRVHNGTDVIDNPLKVGQSYGRKEGITHDVMNGSPHPIAFVEIEIKKPEAL >Mature_131_residues AGPRICRKLQTAPAQMRIGRHLLSSGVRFVAFACTIPAVPTVQQDDDAIRITRWDFAPGAVTGWHRHDWPYFVVMLTDGI LRVHNGTDVIDNPLKVGQSYGRKEGITHDVMNGSPHPIAFVEIEIKKPEAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14695; Mature: 14564
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPRICRKLQTAPAQMRIGRHLLSSGVRFVAFACTIPAVPTVQQDDDAIRITRWDFAPG CCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCC AVTGWHRHDWPYFVVMLTDGILRVHNGTDVIDNPLKVGQSYGRKEGITHDVMNGSPHPIA CCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCEE FVEIEIKKPEAL EEEEEECCCCCC >Mature Secondary Structure AGPRICRKLQTAPAQMRIGRHLLSSGVRFVAFACTIPAVPTVQQDDDAIRITRWDFAPG CCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCC AVTGWHRHDWPYFVVMLTDGILRVHNGTDVIDNPLKVGQSYGRKEGITHDVMNGSPHPIA CCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCEE FVEIEIKKPEAL EEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA