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The map label for this gene is impA

Identifier: 158424222

GI number: 158424222

Start: 2931067

End: 2932233

Strand: Direct

Name: impA

Synonym: AZC_2598

Alternate gene names: NA

Gene position: 2931067-2932233 (Clockwise)

Preceding gene: 158424221

Following gene: 158424223

Centisome position: 54.58

GC content: 69.15

Gene sequence:

>1167_bases
GTGAAGGACAGCGAGAACAGCATGACGGTCGAACCGACTTTTGACGTTTCTGAAGGTCTTGCGCCGATCGGCGACCCGCC
GGGTTGCGGAACCGATCCGCGCGCCGACATGTCCGGCAACTCGCCCTTCCTGCAGATGAAGGACGCGCGCGCCGACGCGC
GCCGGAAGGAACGGGCGCTCGACGTGGACCCCGACGCACCGGGCGCGGAGGACGACTGGGGCTCGGCCGGCGAACTCGGC
ATGCAGATCCTGTCCGGCGTCGGCAAGGATCTGGAGGTGGCCGCCTGGGTCATCGAGGCGCTCGTGCGGCTCGACGGCTA
CCGTGGCCTCTATACGGGCTGCCTGCTGGCCGAAGGCCTCGTCCGCACCTTCTGGGACGGCATCTTTCCGCTGCCCGATG
AGGACGGCAATGACGGGCGCCTCTCGCCCTTCGTGGCGCTCAACGGCGAGGATGGCGAGGGCCTTCTCATCCAGCCGCTG
CGCAAGATCCCGCTGACGGCCGGCAGCGAGCATTTCTCCTACTGGCAGTACGAGCAGGCCCGCGAGATCGCGCAAATCGG
CGATGCCGACCGCCGGGAGGCGCGTATCGCCGCCGGTGGGCTGAGCATGGACGCCTTCGACGAGGCCGTCGGCTCGACAC
CGCCGTCCTTCTTCGCGGATCTCATCGCCCAGATCGAGGCAGCGCTGGCCGCGCTGAACGCTCTGTCAGATGCCTTTTCC
GAGCGTGTGGGCGTGGATGCCCCGCCGGCCGGGGCCATCCGCAACCTGCTCAACACTGTCCTCGACGACGTGCGCATCTT
CGCGGCGTCCAAGCTCGAGCAGGCGAGCGCCAGCCAGCTCTCCGAGCAGGCCGGATCTGACGAGGCGGCCGGCGGCGGCG
AGACCGCGGGCGACGGGGAAGCCGAAACGGGCGGAGCGCCCGGCGCCCCCCGCGGGCCCGTGGCCAATCGCGAGCAGGCC
CTGCGGCTGATCCTCGAGGCGGCCCGCTTCTTCCGGACCAACGAGCCGCATTCGCCGATCTCCTACACGCTGGAGGAGAT
CGTCCGGCGGGCGCGCCTGCCCATGGGCGCGCTCATCGAGGAACTCATCGTCGATCCGGAAGCCCGTCGTTACTTCTACC
TTGCCGCAGGCTTGAGGCCGCCGGCAAATCCGGAACCGCAAGAATAA

Upstream 100 bases:

>100_bases
ACGACGCCGGACCGCCGCAGAGGTCGGGTCAAACATCGCCTTGGACAGGGGCATCGGGTCCACTTAGGCTAACTCCGCGG
TTTCCTCCTTTGGCTGCCCA

Downstream 100 bases:

>100_bases
GATAACCGACATGAATGTGTCGCAGGCCTGAAATACTTGATGATCCAGTCAACGGGGAAGTCTCATGCCCAGCATCCATG
AAAAACTCAATCGCGTGCGC

Product: ImpA-related N-terminal protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; ImpA-Related N-Terminal Protein; Type VI Secretion System Protein TssA; ImpA Domain Protein; Protein ImpA; ImpA-Related N-Terminal Domain-Containing; ImpA Family Type VI Secretion-Associated Protein

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKDSENSMTVEPTFDVSEGLAPIGDPPGCGTDPRADMSGNSPFLQMKDARADARRKERALDVDPDAPGAEDDWGSAGELG
MQILSGVGKDLEVAAWVIEALVRLDGYRGLYTGCLLAEGLVRTFWDGIFPLPDEDGNDGRLSPFVALNGEDGEGLLIQPL
RKIPLTAGSEHFSYWQYEQAREIAQIGDADRREARIAAGGLSMDAFDEAVGSTPPSFFADLIAQIEAALAALNALSDAFS
ERVGVDAPPAGAIRNLLNTVLDDVRIFAASKLEQASASQLSEQAGSDEAAGGGETAGDGEAETGGAPGAPRGPVANREQA
LRLILEAARFFRTNEPHSPISYTLEEIVRRARLPMGALIEELIVDPEARRYFYLAAGLRPPANPEPQE

Sequences:

>Translated_388_residues
MKDSENSMTVEPTFDVSEGLAPIGDPPGCGTDPRADMSGNSPFLQMKDARADARRKERALDVDPDAPGAEDDWGSAGELG
MQILSGVGKDLEVAAWVIEALVRLDGYRGLYTGCLLAEGLVRTFWDGIFPLPDEDGNDGRLSPFVALNGEDGEGLLIQPL
RKIPLTAGSEHFSYWQYEQAREIAQIGDADRREARIAAGGLSMDAFDEAVGSTPPSFFADLIAQIEAALAALNALSDAFS
ERVGVDAPPAGAIRNLLNTVLDDVRIFAASKLEQASASQLSEQAGSDEAAGGGETAGDGEAETGGAPGAPRGPVANREQA
LRLILEAARFFRTNEPHSPISYTLEEIVRRARLPMGALIEELIVDPEARRYFYLAAGLRPPANPEPQE
>Mature_388_residues
MKDSENSMTVEPTFDVSEGLAPIGDPPGCGTDPRADMSGNSPFLQMKDARADARRKERALDVDPDAPGAEDDWGSAGELG
MQILSGVGKDLEVAAWVIEALVRLDGYRGLYTGCLLAEGLVRTFWDGIFPLPDEDGNDGRLSPFVALNGEDGEGLLIQPL
RKIPLTAGSEHFSYWQYEQAREIAQIGDADRREARIAAGGLSMDAFDEAVGSTPPSFFADLIAQIEAALAALNALSDAFS
ERVGVDAPPAGAIRNLLNTVLDDVRIFAASKLEQASASQLSEQAGSDEAAGGGETAGDGEAETGGAPGAPRGPVANREQA
LRLILEAARFFRTNEPHSPISYTLEEIVRRARLPMGALIEELIVDPEARRYFYLAAGLRPPANPEPQE

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41334; Mature: 41334

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSENSMTVEPTFDVSEGLAPIGDPPGCGTDPRADMSGNSPFLQMKDARADARRKERAL
CCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCC
DVDPDAPGAEDDWGSAGELGMQILSGVGKDLEVAAWVIEALVRLDGYRGLYTGCLLAEGL
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VRTFWDGIFPLPDEDGNDGRLSPFVALNGEDGEGLLIQPLRKIPLTAGSEHFSYWQYEQA
HHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
REIAQIGDADRREARIAAGGLSMDAFDEAVGSTPPSFFADLIAQIEAALAALNALSDAFS
HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVGVDAPPAGAIRNLLNTVLDDVRIFAASKLEQASASQLSEQAGSDEAAGGGETAGDGE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AETGGAPGAPRGPVANREQALRLILEAARFFRTNEPHSPISYTLEEIVRRARLPMGALIE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
ELIVDPEARRYFYLAAGLRPPANPEPQE
HHHCCCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKDSENSMTVEPTFDVSEGLAPIGDPPGCGTDPRADMSGNSPFLQMKDARADARRKERAL
CCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCC
DVDPDAPGAEDDWGSAGELGMQILSGVGKDLEVAAWVIEALVRLDGYRGLYTGCLLAEGL
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VRTFWDGIFPLPDEDGNDGRLSPFVALNGEDGEGLLIQPLRKIPLTAGSEHFSYWQYEQA
HHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
REIAQIGDADRREARIAAGGLSMDAFDEAVGSTPPSFFADLIAQIEAALAALNALSDAFS
HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVGVDAPPAGAIRNLLNTVLDDVRIFAASKLEQASASQLSEQAGSDEAAGGGETAGDGE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AETGGAPGAPRGPVANREQALRLILEAARFFRTNEPHSPISYTLEEIVRRARLPMGALIE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
ELIVDPEARRYFYLAAGLRPPANPEPQE
HHHCCCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA