| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424215
Identifier: 158424215
GI number: 158424215
Start: 2919813
End: 2920289
Strand: Direct
Name: 158424215
Synonym: AZC_2591
Alternate gene names: NA
Gene position: 2919813-2920289 (Clockwise)
Preceding gene: 158424214
Following gene: 158424216
Centisome position: 54.37
GC content: 63.1
Gene sequence:
>477_bases ATGGCCATCTACGTTAAATATGACGGCATCGACGGCGAAGCCACGCAGCAGGACCACAAGAAGTGGATCGACGTCCTCTC GCTCTCCTGGGGCGTCGGGCGCGGCATCTCCACCGTCTCGGGCTCCGGCAACAACCGCGAGGCCTCCGAGCCCTCCATCA GCGAAGTGTCCATCGTCAAGATGTTCGATGCGTCCTCGCCCAAGCTCTTCACGGAGGCCTGCACGGGCAACACCGGCAAG ACCGTGAAGATCGACCTCACCACCACCGGCAGCCCGGGCGCGACCTACTGCACCTACACGCTGACCAACGCGCTGATCTC GTCCTACTCGGTGTCCTCGGGCGGCGACCGCCCCACCGAGTCCATCTCGATCAGCTTCACCAAGCTCGAGTTCAAGTTCA CCCCCTACGACGACAAGAACAAGGCCGGCACCCCGGTCACCGTGTCCTACGATCTCGCCACCACCAAGAGCTCGTGA
Upstream 100 bases:
>100_bases GCATGCCATATATCCAGAACGTTTTCCCCAAGCTTTCTATTTTACCCCTCTGAACGGCAAGTTCGGCTCCGAAATCTCAA CGCCAACAGGAGAGTAAACT
Downstream 100 bases:
>100_bases CGCGCGGATCGAAGGTCAGGTTCACAGGCTTGGCCGCGCGGGACCCTGTCCCGCGCGGCGCTCCAGTTTGCGGGGCACAG GCGACTCTGCCCCGCCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System Effector Hcp1 Family; Hcp Family T6SS H; Histidine Kinase; Type VI Secretion System Protein; Type VI Secretion System Protein EvpC
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MAIYVKYDGIDGEATQQDHKKWIDVLSLSWGVGRGISTVSGSGNNREASEPSISEVSIVKMFDASSPKLFTEACTGNTGK TVKIDLTTTGSPGATYCTYTLTNALISSYSVSSGGDRPTESISISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS
Sequences:
>Translated_158_residues MAIYVKYDGIDGEATQQDHKKWIDVLSLSWGVGRGISTVSGSGNNREASEPSISEVSIVKMFDASSPKLFTEACTGNTGK TVKIDLTTTGSPGATYCTYTLTNALISSYSVSSGGDRPTESISISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS >Mature_157_residues AIYVKYDGIDGEATQQDHKKWIDVLSLSWGVGRGISTVSGSGNNREASEPSISEVSIVKMFDASSPKLFTEACTGNTGKT VKIDLTTTGSPGATYCTYTLTNALISSYSVSSGGDRPTESISISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS
Specific function: Unknown
COG id: COG3157
COG function: function code S; Hemolysin-coregulated protein (uncharacterized)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16837; Mature: 16706
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYVKYDGIDGEATQQDHKKWIDVLSLSWGVGRGISTVSGSGNNREASEPSISEVSIVK CEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEE MFDASSPKLFTEACTGNTGKTVKIDLTTTGSPGATYCTYTLTNALISSYSVSSGGDRPTE EECCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCC SISISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS EEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCC >Mature Secondary Structure AIYVKYDGIDGEATQQDHKKWIDVLSLSWGVGRGISTVSGSGNNREASEPSISEVSIVK EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEE MFDASSPKLFTEACTGNTGKTVKIDLTTTGSPGATYCTYTLTNALISSYSVSSGGDRPTE EECCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCC SISISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS EEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA