| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yhbQ [C]
Identifier: 158424187
GI number: 158424187
Start: 2888542
End: 2888838
Strand: Direct
Name: yhbQ [C]
Synonym: AZC_2563
Alternate gene names: 158424187
Gene position: 2888542-2888838 (Clockwise)
Preceding gene: 158424139
Following gene: 158424191
Centisome position: 53.79
GC content: 71.72
Gene sequence:
>297_bases ATGTCCGATTCTTCCGAGCTGCCCTGCCCCTGGTCCGCCTATCTCGTCGAATGTGGCGACGGCTCGCTTTATTGCGGGGT GGCGATCGATGTGGAGCGGCGGATGCGCGACCACGCGACGCCCAAGGGCGCCCGCTATGTGCGCGGGCATGGCGGCGTGA AGCGCCTGCTCTGGTCGCGTCCCTTCGCCTCGCGTGGGGCCGCGCTCAGGGCCGAACTGCGCATCAAGGCCCTGCCCCGC CGGGCCAAGCTGGACCTCGCCGCCACCGGGGCCATGCCCGGCGGCTGGCCGGAGTGA
Upstream 100 bases:
>100_bases CGAACGGCTGCCCCTTATAACGCCCCTGCGTGACTGGAACCACGCCGCACCCGATGGCACAAACGGGACGCCATCCGCCC CGCCTTCAGCCCCTTGCGAC
Downstream 100 bases:
>100_bases GCGGCGCGCGCCCGCACGCCGCTCCTGATCTCACGCAGCGTTAAGGTCGCGGACGAAGGTCTCCACCACCGACCGCAGGT CCGTCGCCTGGGCCGAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSRPFASRGAALRAELRIKALPR RAKLDLAATGAMPGGWPE
Sequences:
>Translated_98_residues MSDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSRPFASRGAALRAELRIKALPR RAKLDLAATGAMPGGWPE >Mature_97_residues SDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSRPFASRGAALRAELRIKALPRR AKLDLAATGAMPGGWPE
Specific function: Unknown
COG id: COG2827
COG function: function code L; Predicted endonuclease containing a URI domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0213 family [H]
Homologues:
Organism=Escherichia coli, GI1789545, Length=83, Percent_Identity=45.7831325301205, Blast_Score=77, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000305 [H]
Pfam domain/function: PF01541 GIY-YIG [H]
EC number: NA
Molecular weight: Translated: 10695; Mature: 10564
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSR CCCCCCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCEEEECCCCHHHHHHCC PFASRGAALRAELRIKALPRRAKLDLAATGAMPGGWPE CCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure SDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSR CCCCCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCEEEECCCCHHHHHHCC PFASRGAALRAELRIKALPRRAKLDLAATGAMPGGWPE CCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]