| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ppaX [H]
Identifier: 158424144
GI number: 158424144
Start: 2857409
End: 2858101
Strand: Reverse
Name: ppaX [H]
Synonym: AZC_2520
Alternate gene names: 158424144
Gene position: 2858101-2857409 (Counterclockwise)
Preceding gene: 158424145
Following gene: 158424143
Centisome position: 53.23
GC content: 69.7
Gene sequence:
>693_bases ATGACCCTTGAGCCCATCCTCGCCCTGTTCGACTGCGACGGCACGCTGGTGGACAGTCAGCACATGATCGTCGCCGCCAT GGGCACGGCCTATGCCCGGCAGGGCCTCCCCGCGCCGGACCGGCTGCGCATGCTCTCCATCGTCGGCCTGTCGCTGCGCG AAGCCTTCACCGACCTCGCCGAGGGCGATGCCGCCTTTCCCGTGGAGGAGATGGTGGAAGCCTATCGCAGCGCCTTCATG GAGCTGCGCGACCGCGAGCCGCCCGAGCCCATGTACCCCTTCGCCCGCGATACGCTCGATGGGCTGCGCCAGCGCGACGA CATGCTGCTCGGCATGGTGACGGGCAAGGCCCGGCGTGGCGTCACGCGCGTTCTGGCGGCCAATGCCATGGACGGCTGGT TCTCGACCATCCAGACCGCCGACGATGCGCCCTCCAAGCCCCATCCGGCCATGGTGCAGCAGGCCATGGCGGAGATGGGA CAGCCCTCCGCCCGCACGGTGGTGATCGGCGACACCGGCTTCGACATGGCCATGGCCAAGGCGGCCGGGGCCCATGCCAT CGGTGTCGCCTGGGGCTATCATCCGCTGGAACAACTCACTGCGGCCGGTGCCGATGTGATCGTGCGCGACTTCCGCGAGA TTCCGGACGCCATTGCGGCGCTGGTCGGCGGTCGCGCGCCCGCCGTCGCCTGA
Upstream 100 bases:
>100_bases GCCAGTGCAAGGCGCGCGGCTTCAAGCAGGTGGTGTTCATCGATGCCAACGGCACCACCACCTGGACCCTCGACCTCGAC ACCGACAAGTTGACCCAGAA
Downstream 100 bases:
>100_bases GATTTTCGAGGAACCGAGCCATGCGCGACATCCTGAGCGACCTTGAGCAGTCGCCGCTCGATCCGGCCGAGGCCATCCGC GCGCAGGGCCGCCGCACGCT
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTLEPILALFDCDGTLVDSQHMIVAAMGTAYARQGLPAPDRLRMLSIVGLSLREAFTDLAEGDAAFPVEEMVEAYRSAFM ELRDREPPEPMYPFARDTLDGLRQRDDMLLGMVTGKARRGVTRVLAANAMDGWFSTIQTADDAPSKPHPAMVQQAMAEMG QPSARTVVIGDTGFDMAMAKAAGAHAIGVAWGYHPLEQLTAAGADVIVRDFREIPDAIAALVGGRAPAVA
Sequences:
>Translated_230_residues MTLEPILALFDCDGTLVDSQHMIVAAMGTAYARQGLPAPDRLRMLSIVGLSLREAFTDLAEGDAAFPVEEMVEAYRSAFM ELRDREPPEPMYPFARDTLDGLRQRDDMLLGMVTGKARRGVTRVLAANAMDGWFSTIQTADDAPSKPHPAMVQQAMAEMG QPSARTVVIGDTGFDMAMAKAAGAHAIGVAWGYHPLEQLTAAGADVIVRDFREIPDAIAALVGGRAPAVA >Mature_229_residues TLEPILALFDCDGTLVDSQHMIVAAMGTAYARQGLPAPDRLRMLSIVGLSLREAFTDLAEGDAAFPVEEMVEAYRSAFME LRDREPPEPMYPFARDTLDGLRQRDDMLLGMVTGKARRGVTRVLAANAMDGWFSTIQTADDAPSKPHPAMVQQAMAEMGQ PSARTVVIGDTGFDMAMAKAAGAHAIGVAWGYHPLEQLTAAGADVIVRDFREIPDAIAALVGGRAPAVA
Specific function: Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=232, Percent_Identity=29.7413793103448, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 24646; Mature: 24514
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEPILALFDCDGTLVDSQHMIVAAMGTAYARQGLPAPDRLRMLSIVGLSLREAFTDLA CCHHHHHHEECCCCCEECCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EGDAAFPVEEMVEAYRSAFMELRDREPPEPMYPFARDTLDGLRQRDDMLLGMVTGKARRG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH VTRVLAANAMDGWFSTIQTADDAPSKPHPAMVQQAMAEMGQPSARTVVIGDTGFDMAMAK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH AAGAHAIGVAWGYHPLEQLTAAGADVIVRDFREIPDAIAALVGGRAPAVA HCCCCEEEHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLEPILALFDCDGTLVDSQHMIVAAMGTAYARQGLPAPDRLRMLSIVGLSLREAFTDLA CHHHHHHEECCCCCEECCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EGDAAFPVEEMVEAYRSAFMELRDREPPEPMYPFARDTLDGLRQRDDMLLGMVTGKARRG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH VTRVLAANAMDGWFSTIQTADDAPSKPHPAMVQQAMAEMGQPSARTVVIGDTGFDMAMAK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH AAGAHAIGVAWGYHPLEQLTAAGADVIVRDFREIPDAIAALVGGRAPAVA HCCCCEEEHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]