| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424129
Identifier: 158424129
GI number: 158424129
Start: 2839295
End: 2840233
Strand: Direct
Name: 158424129
Synonym: AZC_2505
Alternate gene names: NA
Gene position: 2839295-2840233 (Clockwise)
Preceding gene: 158424128
Following gene: 158424130
Centisome position: 52.88
GC content: 67.09
Gene sequence:
>939_bases ATGGGCCGGCTGCACCACCTGCCGCTGAACGCCTCAGGCTCTCCTGCGAGGACCGTCATGGCCAACCCGCGCATTCCCTA TCGCTTCTCCACCTCCGCGCCGCCTTTGCCGCCGCTGAACGGCAAGCGCATCCTCGTCCATCTGGTGGTGAACGTGGAGC ACTGGCAGTTCGACCGCGCCATGCCACGCACCATCATCACCCCACCCCACGGGCAGGGCTCGATCCCGGACGTGCCCAAC TTCTCCTGGGCGGATTACGGCATGCGCGCGGGCCTGCCGCGCATCCTCGATCTGTTCAGAGCCCGTGGCCTGCCCGCCTC CACCAGTTTCAATGCCGGCGTCATCGACGCCTATCCGCAAGCCGCCGAGGCAATGCTCAGGGCCGGCTGGGAGTTCATCG GCCACGGCCTGCACCAGAAGGCGATCCAGAACACGGACGGCGATGCGGAAGCCGAGATGATCGCCGCCGCACTCGACAAG ATCGCCGGCTTCACGGGCGCCCGCCCGCGCGGCTGGCTGTCGCCGGGCCTGCGGGAGAGCGAGCGTACGCCGGATCTCCT GAAGGCGCAGGGCGTCGATTATGTCTGCGACTGGGTGGTGGACGACGTGCCGAACTGGATGACCACCGCCCACGGGCCGC TGGTCGCCATGCCCTACAATCTGGAGATCAACGACAGCATCATCTACGCCATCGAGCGGCACGCCACGGGCGAGATGGAG AAACGGCTCAGGCACACGCTGGCGCTGTTCGAGGCCGAATGCACCCGTTCACCGCGTGTGCTGGCGCTGGGGCTGCACCC CCATCTCATCAGCGTGCCCCATCGCATGCATGAGCTGGTCAATATGGTGGATGCGCTGGCCGCCTCGCCCGAAGTGGCCT TCGTCACCGGCAGCCAGATCTGCGACTGGTTCACCACCGCCGCTTCCCCGGAGAGCTGA
Upstream 100 bases:
>100_bases CTGCTCAGCCCCGCCTTCGTGGCGTTCAAGGCGCAGATCATGTCCGAGATGCGCGGCGCGCACTAAGGCGCCGCTCCCCC ATACGGCCGGCCATGTCCCA
Downstream 100 bases:
>100_bases CCCATGGACCTCGATCTCAAGGGGCGTCGCGTCCTCATCACCGGCGGTTCAAAGGGCATCGGCGCGGCCTGTGCGCGCGT CTTCCTGGGGGAAGGCGCCG
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Family; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Allantoinase; Uricase
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MGRLHHLPLNASGSPARTVMANPRIPYRFSTSAPPLPPLNGKRILVHLVVNVEHWQFDRAMPRTIITPPHGQGSIPDVPN FSWADYGMRAGLPRILDLFRARGLPASTSFNAGVIDAYPQAAEAMLRAGWEFIGHGLHQKAIQNTDGDAEAEMIAAALDK IAGFTGARPRGWLSPGLRESERTPDLLKAQGVDYVCDWVVDDVPNWMTTAHGPLVAMPYNLEINDSIIYAIERHATGEME KRLRHTLALFEAECTRSPRVLALGLHPHLISVPHRMHELVNMVDALAASPEVAFVTGSQICDWFTTAASPES
Sequences:
>Translated_312_residues MGRLHHLPLNASGSPARTVMANPRIPYRFSTSAPPLPPLNGKRILVHLVVNVEHWQFDRAMPRTIITPPHGQGSIPDVPN FSWADYGMRAGLPRILDLFRARGLPASTSFNAGVIDAYPQAAEAMLRAGWEFIGHGLHQKAIQNTDGDAEAEMIAAALDK IAGFTGARPRGWLSPGLRESERTPDLLKAQGVDYVCDWVVDDVPNWMTTAHGPLVAMPYNLEINDSIIYAIERHATGEME KRLRHTLALFEAECTRSPRVLALGLHPHLISVPHRMHELVNMVDALAASPEVAFVTGSQICDWFTTAASPES >Mature_311_residues GRLHHLPLNASGSPARTVMANPRIPYRFSTSAPPLPPLNGKRILVHLVVNVEHWQFDRAMPRTIITPPHGQGSIPDVPNF SWADYGMRAGLPRILDLFRARGLPASTSFNAGVIDAYPQAAEAMLRAGWEFIGHGLHQKAIQNTDGDAEAEMIAAALDKI AGFTGARPRGWLSPGLRESERTPDLLKAQGVDYVCDWVVDDVPNWMTTAHGPLVAMPYNLEINDSIIYAIERHATGEMEK RLRHTLALFEAECTRSPRVLALGLHPHLISVPHRMHELVNMVDALAASPEVAFVTGSQICDWFTTAASPES
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34276; Mature: 34144
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLHHLPLNASGSPARTVMANPRIPYRFSTSAPPLPPLNGKRILVHLVVNVEHWQFDRA CCCEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEEECCHHHHCCC MPRTIITPPHGQGSIPDVPNFSWADYGMRAGLPRILDLFRARGLPASTSFNAGVIDAYPQ CCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHH AAEAMLRAGWEFIGHGLHQKAIQNTDGDAEAEMIAAALDKIAGFTGARPRGWLSPGLRES HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC ERTPDLLKAQGVDYVCDWVVDDVPNWMTTAHGPLVAMPYNLEINDSIIYAIERHATGEME CCCCHHHHHCCCCHHHHHHHHCCCCHHHHCCCCEEEEEECEEECCCEEEEEECCCCHHHH KRLRHTLALFEAECTRSPRVLALGLHPHLISVPHRMHELVNMVDALAASPEVAFVTGSQI HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHH CDWFTTAASPES HHHHHCCCCCCC >Mature Secondary Structure GRLHHLPLNASGSPARTVMANPRIPYRFSTSAPPLPPLNGKRILVHLVVNVEHWQFDRA CCEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEEECCHHHHCCC MPRTIITPPHGQGSIPDVPNFSWADYGMRAGLPRILDLFRARGLPASTSFNAGVIDAYPQ CCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHH AAEAMLRAGWEFIGHGLHQKAIQNTDGDAEAEMIAAALDKIAGFTGARPRGWLSPGLRES HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC ERTPDLLKAQGVDYVCDWVVDDVPNWMTTAHGPLVAMPYNLEINDSIIYAIERHATGEME CCCCHHHHHCCCCHHHHHHHHCCCCHHHHCCCCEEEEEECEEECCCEEEEEECCCCHHHH KRLRHTLALFEAECTRSPRVLALGLHPHLISVPHRMHELVNMVDALAASPEVAFVTGSQI HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHH CDWFTTAASPES HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA