Click here to switch to the map view.

The map label for this gene is cmpB [H]

Identifier: 158424094

GI number: 158424094

Start: 2806643

End: 2807419

Strand: Reverse

Name: cmpB [H]

Synonym: AZC_2470

Alternate gene names: 158424094

Gene position: 2807419-2806643 (Counterclockwise)

Preceding gene: 158424095

Following gene: 158424093

Centisome position: 52.28

GC content: 64.48

Gene sequence:

>777_bases
GTGGCGACTTCGGCGCTCTACCGCTTCTCCGGCTATGCCTTCTGGCTGCGGCTCGCTGTCATCGTGGGCGCGGTCGGGGC
GCTGGAATTTGCCTGCCGCATCGGCTGGATTCCCATGACCATCCTTCTGCCGCCGTCGGTCATGGCGGCGAGCCTTGCGG
AGATCCTGGCGCGCGGCACCTACAATCGCGACATGCTGGTGAGCTTCAGCAACGTGGCGGCGGCGGCCGTGATCGCCATC
GTGCTCGGCTTTCTCATCGGCGCCATCCTGCACGCCCTGCCGAAGGTGCGCGGTGCGGTGGAGCCTCTGCTGGCCAGCTA
TTATGCTGTCCCGACCTTCATGTTCTACCCGGTCTTCATCATCCTGTTCGGGGTCGGCAGCGGGGCCATCATCGCCATCG
CCGTGCTGCTCGCCATCGTGGCCATGATCACCGCGACACTGAACGGCATCGACCGCATTCCGCCCGTGCTCGGCAAGACC
GCGCGCATGCTGCGCATGGGGCCGGTGGAGCGGGCCTTGAAGATCAGCCTGCCGGCGGCGCTGCCCTATCTCTTCACCGG
CATGAAGCTCTCGGTTGCTTATGCCTTCATCGGCGTCATCGCGTCCGAATTCATCCTGTCGGGCGCCGGCATCGGTTATG
CCATTGCCTATGCCTATAACAACTTCAACAACCGCGACATGTACGCCTTGATGTTGCTCATCATCCTGGCGGTCACGGTG
ATCAATGCCGGGCTCGACGCGGTCGACCGGCGGCTCCAGTCCCGGCTGAGGCGGTGA

Upstream 100 bases:

>100_bases
ATCGTCTCCCATCCGCGCTTCGGCGAACTCACCGCGCATCTGTGGGAGAAGCTGCGCGCTGAATCCCTCAAGCACCTGCG
CGGAAGCTGAGGAGGCGGCC

Downstream 100 bases:

>100_bases
TCGCCATGCGCCATGTCCTTGGTCCTCTCCTCGTCATTCTCGCCGGCCTCGTCGCCTGGGAGGCGCTGCACCTCGGTGTC
GCCAATTCCAGCCTGCCCTC

Product: ABC transporter

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MATSALYRFSGYAFWLRLAVIVGAVGALEFACRIGWIPMTILLPPSVMAASLAEILARGTYNRDMLVSFSNVAAAAVIAI
VLGFLIGAILHALPKVRGAVEPLLASYYAVPTFMFYPVFIILFGVGSGAIIAIAVLLAIVAMITATLNGIDRIPPVLGKT
ARMLRMGPVERALKISLPAALPYLFTGMKLSVAYAFIGVIASEFILSGAGIGYAIAYAYNNFNNRDMYALMLLIILAVTV
INAGLDAVDRRLQSRLRR

Sequences:

>Translated_258_residues
MATSALYRFSGYAFWLRLAVIVGAVGALEFACRIGWIPMTILLPPSVMAASLAEILARGTYNRDMLVSFSNVAAAAVIAI
VLGFLIGAILHALPKVRGAVEPLLASYYAVPTFMFYPVFIILFGVGSGAIIAIAVLLAIVAMITATLNGIDRIPPVLGKT
ARMLRMGPVERALKISLPAALPYLFTGMKLSVAYAFIGVIASEFILSGAGIGYAIAYAYNNFNNRDMYALMLLIILAVTV
INAGLDAVDRRLQSRLRR
>Mature_257_residues
ATSALYRFSGYAFWLRLAVIVGAVGALEFACRIGWIPMTILLPPSVMAASLAEILARGTYNRDMLVSFSNVAAAAVIAIV
LGFLIGAILHALPKVRGAVEPLLASYYAVPTFMFYPVFIILFGVGSGAIIAIAVLLAIVAMITATLNGIDRIPPVLGKTA
RMLRMGPVERALKISLPAALPYLFTGMKLSVAYAFIGVIASEFILSGAGIGYAIAYAYNNFNNRDMYALMLLIILAVTVI
NAGLDAVDRRLQSRLRR

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=214, Percent_Identity=26.1682242990654, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27637; Mature: 27506

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATSALYRFSGYAFWLRLAVIVGAVGALEFACRIGWIPMTILLPPSVMAASLAEILARGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCC
YNRDMLVSFSNVAAAAVIAIVLGFLIGAILHALPKVRGAVEPLLASYYAVPTFMFYPVFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFGVGSGAIIAIAVLLAIVAMITATLNGIDRIPPVLGKTARMLRMGPVERALKISLPAA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHCHHH
LPYLFTGMKLSVAYAFIGVIASEFILSGAGIGYAIAYAYNNFNNRDMYALMLLIILAVTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
INAGLDAVDRRLQSRLRR
HHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA