| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423981
Identifier: 158423981
GI number: 158423981
Start: 2686140
End: 2686676
Strand: Reverse
Name: 158423981
Synonym: AZC_2357
Alternate gene names: NA
Gene position: 2686676-2686140 (Counterclockwise)
Preceding gene: 158423982
Following gene: 158423979
Centisome position: 50.03
GC content: 67.41
Gene sequence:
>537_bases ATGGCTGTGTTTCCCTCGGTTCGCTCTTTCGGAGCCGGCCTTCTCGCCCTCGGGCTGATGGCGGGCAGCGCGCTGGCCCA GACAGCGGCGCCCGCCGCCCCGGCCGCCTTGCCCCAGCCGACGGCGGCGCAGATGCAGATCGCCCGCCAGCTCGTGGAAG CCAATGGCGAGGCCCATGCCTTCGACGGCATCATCCCGAACATCGTGGATGGCGCGGCGCTCGGCTTCCTGCAGACCAAT CCGGATCTCGCGCCCAAGCTGCGGGACACGGCCAAGGCGCTGCGGCCGGAGTTCGAGAAGCGCAAGGGCGAGCTGATGGA CATCCTGGCTGCGTCCTATGCCCAGCGCTTCACCGAGCAGGAGCTGAAGGACGCGCTCGCTTTCTACCAGACCCCCGTCG GCAAGAAGCTGGTGAGCGACCGCGCGCAGATCGTGCAGCAGGCGGTGATCGCCATTCAGGCCTGGGGCGCCAAGCTCAAC AGCGAGGCCATGAACCGCATCCGCGAGGAAATGAAGAAGCAGGGCTACGATCTCTGA
Upstream 100 bases:
>100_bases TCGGTCATCACGCCCTGAGGACGAGCGGCCGGAAGCGGCAAGCTTCTGGATGCATCCCACTCTGGATCAGTTATAGAGAA CGCCCCTTCTGGAGAATGTC
Downstream 100 bases:
>100_bases TCGCCCTGCGGGCGCCCCTTTGCCAGAGCGGGCCAAGGATGGGGTTTCGCCCTGTTCTTGGACCCGGCGGGGAAGTGGGG CCTCGTATCCAGGTGCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAVFPSVRSFGAGLLALGLMAGSALAQTAAPAAPAALPQPTAAQMQIARQLVEANGEAHAFDGIIPNIVDGAALGFLQTN PDLAPKLRDTAKALRPEFEKRKGELMDILAASYAQRFTEQELKDALAFYQTPVGKKLVSDRAQIVQQAVIAIQAWGAKLN SEAMNRIREEMKKQGYDL
Sequences:
>Translated_178_residues MAVFPSVRSFGAGLLALGLMAGSALAQTAAPAAPAALPQPTAAQMQIARQLVEANGEAHAFDGIIPNIVDGAALGFLQTN PDLAPKLRDTAKALRPEFEKRKGELMDILAASYAQRFTEQELKDALAFYQTPVGKKLVSDRAQIVQQAVIAIQAWGAKLN SEAMNRIREEMKKQGYDL >Mature_177_residues AVFPSVRSFGAGLLALGLMAGSALAQTAAPAAPAALPQPTAAQMQIARQLVEANGEAHAFDGIIPNIVDGAALGFLQTNP DLAPKLRDTAKALRPEFEKRKGELMDILAASYAQRFTEQELKDALAFYQTPVGKKLVSDRAQIVQQAVIAIQAWGAKLNS EAMNRIREEMKKQGYDL
Specific function: Unknown
COG id: COG3184
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19075; Mature: 18944
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFPSVRSFGAGLLALGLMAGSALAQTAAPAAPAALPQPTAAQMQIARQLVEANGEAHA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH FDGIIPNIVDGAALGFLQTNPDLAPKLRDTAKALRPEFEKRKGELMDILAASYAQRFTEQ HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH ELKDALAFYQTPVGKKLVSDRAQIVQQAVIAIQAWGAKLNSEAMNRIREEMKKQGYDL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVFPSVRSFGAGLLALGLMAGSALAQTAAPAAPAALPQPTAAQMQIARQLVEANGEAHA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH FDGIIPNIVDGAALGFLQTNPDLAPKLRDTAKALRPEFEKRKGELMDILAASYAQRFTEQ HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH ELKDALAFYQTPVGKKLVSDRAQIVQQAVIAIQAWGAKLNSEAMNRIREEMKKQGYDL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA