| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is usg [H]
Identifier: 158423934
GI number: 158423934
Start: 2634688
End: 2634957
Strand: Reverse
Name: usg [H]
Synonym: AZC_2310
Alternate gene names: 158423934
Gene position: 2634957-2634688 (Counterclockwise)
Preceding gene: 158423938
Following gene: 158423933
Centisome position: 49.07
GC content: 61.48
Gene sequence:
>270_bases ATGGCGTCTTCCGATTTTGCCAAGCAGATGGCCGGCTACGGGCTGGTGACCGCCCACATCCTTTACCGGATGCCGGATCA CCCGAGCTTCCTCCAGACCTACATCTGGCAGAATTACGATCTCTCGCCCCGCTTCCCCGAGCTGAACCGCTTTCTCGAAT TCTGGCAGCGCGAACTGGAAGGTCCGCTGCACGAGGTGCGCGTGGTGCATCAGAGCCTCATCAAGCCCGCCGAGCTGCGG GCCGTGGGCGGCATTTTCCAGATCCACTGA
Upstream 100 bases:
>100_bases CAAAATGGAAACCATTCTTTAGGCTTGCCTCGCGCAAGCTCCGTAGCCGACAATTCACCTGTCTTAACCACGAGGGTTTC AGCTCATACGGAGGTGTTCG
Downstream 100 bases:
>100_bases TCTGTTCCCTATGGGAATGTGTCTGGGGGCAGGGCGCCCGGTTTCGCTGCGGGCGCCCTGACACCGCCGCTTTATCAGTG TTAAAGAGGGGGCCGTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MASSDFAKQMAGYGLVTAHILYRMPDHPSFLQTYIWQNYDLSPRFPELNRFLEFWQRELEGPLHEVRVVHQSLIKPAELR AVGGIFQIH
Sequences:
>Translated_89_residues MASSDFAKQMAGYGLVTAHILYRMPDHPSFLQTYIWQNYDLSPRFPELNRFLEFWQRELEGPLHEVRVVHQSLIKPAELR AVGGIFQIH >Mature_88_residues ASSDFAKQMAGYGLVTAHILYRMPDHPSFLQTYIWQNYDLSPRFPELNRFLEFWQRELEGPLHEVRVVHQSLIKPAELRA VGGIFQIH
Specific function: Probably necessary for the cotranslation of trpF. It may also function as a subunit or stabilizer of phosphoribosylanthranilate isomerase (trpF) [H]
COG id: COG5425
COG function: function code E; Usg protein, probable subunit of phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009354 [H]
Pfam domain/function: PF06233 Usg [H]
EC number: NA
Molecular weight: Translated: 10441; Mature: 10310
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSDFAKQMAGYGLVTAHILYRMPDHPSFLQTYIWQNYDLSPRFPELNRFLEFWQRELE CCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC GPLHEVRVVHQSLIKPAELRAVGGIFQIH CHHHHHHHHHHHHCCHHHHHHHCCHHCCC >Mature Secondary Structure ASSDFAKQMAGYGLVTAHILYRMPDHPSFLQTYIWQNYDLSPRFPELNRFLEFWQRELE CCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC GPLHEVRVVHQSLIKPAELRAVGGIFQIH CHHHHHHHHHHHHCCHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2828322; 11259647 [H]