| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423920
Identifier: 158423920
GI number: 158423920
Start: 2621731
End: 2622255
Strand: Reverse
Name: 158423920
Synonym: AZC_2296
Alternate gene names: NA
Gene position: 2622255-2621731 (Counterclockwise)
Preceding gene: 158423921
Following gene: 158423919
Centisome position: 48.83
GC content: 64.95
Gene sequence:
>525_bases GTGACCGATCTTCCCTATTCCCAGATCCTCGCCGTTGCGGACATCCCGCCGCAGGGCCTCGAACTGACCCTGAAGCCGGA TGCGGACGTCTGCGCGGCGATGGCCCGCCACCTCGATATTCCGGCCGTGAGCGAGGTGGTGGCGAAACTGCGCCTGACGC AGGAGAAGGCGGATGGCGCCCGCGTCACCGGGCGCGTCAGCGCGAAAGTGACACAGATTTCCGTCGTCTCCCTTGAACCC TTCGAGTCTTCCTTTTCCGAGGAACTGGACGTGCGCTTCGCCACCGCCGACATCATCGCCCGGGAAGTGGCGGATGCGCC GGAAGAGAGCGATTTCGATCCGCCCGACCTCATCGAGAACGGCAGCATCGACCTCGGGCTGCTCGTGACCGAGTTCCTCG CACTCGGGCTCGATCCCTATCCGCGCAAGGACGGTGAGGTGTTCAAGGCCTATCAGGAATCCGATCCTGCCGAGGCCCCG GTGTCGCCTTTCGCGGCGCTCGCGCGGCTGAAGGAAAAGCCGTGA
Upstream 100 bases:
>100_bases TCCGGGACTGCCTTGCCGCGCTCGGCACGCAGGCTGATTCCGATTTCGCGCGGGGCCGCATTGCGTTCCCGCTCCCGAGG GCCGAGGAGGCCACACAACC
Downstream 100 bases:
>100_bases TTTTCCACCGGAGTTGCGATGTGCGGGCGAGTGGCTATTTTCCGCCCGCCGGCGTCTGTTGCGTCGCTGCGCGGATTGTT TCAGGAATTCAGGGCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTDLPYSQILAVADIPPQGLELTLKPDADVCAAMARHLDIPAVSEVVAKLRLTQEKADGARVTGRVSAKVTQISVVSLEP FESSFSEELDVRFATADIIAREVADAPEESDFDPPDLIENGSIDLGLLVTEFLALGLDPYPRKDGEVFKAYQESDPAEAP VSPFAALARLKEKP
Sequences:
>Translated_174_residues MTDLPYSQILAVADIPPQGLELTLKPDADVCAAMARHLDIPAVSEVVAKLRLTQEKADGARVTGRVSAKVTQISVVSLEP FESSFSEELDVRFATADIIAREVADAPEESDFDPPDLIENGSIDLGLLVTEFLALGLDPYPRKDGEVFKAYQESDPAEAP VSPFAALARLKEKP >Mature_173_residues TDLPYSQILAVADIPPQGLELTLKPDADVCAAMARHLDIPAVSEVVAKLRLTQEKADGARVTGRVSAKVTQISVVSLEPF ESSFSEELDVRFATADIIAREVADAPEESDFDPPDLIENGSIDLGLLVTEFLALGLDPYPRKDGEVFKAYQESDPAEAPV SPFAALARLKEKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18763; Mature: 18632
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: PS00697 DNA_LIGASE_A1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLPYSQILAVADIPPQGLELTLKPDADVCAAMARHLDIPAVSEVVAKLRLTQEKADGA CCCCCHHHEEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC RVTGRVSAKVTQISVVSLEPFESSFSEELDVRFATADIIAREVADAPEESDFDPPDLIEN EEEEEEEEEEEEEEEEEECCHHHHHHHHHHEEHHHHHHHHHHHHCCCCCCCCCCCCHHCC GSIDLGLLVTEFLALGLDPYPRKDGEVFKAYQESDPAEAPVSPFAALARLKEKP CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TDLPYSQILAVADIPPQGLELTLKPDADVCAAMARHLDIPAVSEVVAKLRLTQEKADGA CCCCHHHEEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC RVTGRVSAKVTQISVVSLEPFESSFSEELDVRFATADIIAREVADAPEESDFDPPDLIEN EEEEEEEEEEEEEEEEEECCHHHHHHHHHHEEHHHHHHHHHHHHCCCCCCCCCCCCHHCC GSIDLGLLVTEFLALGLDPYPRKDGEVFKAYQESDPAEAPVSPFAALARLKEKP CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA