| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is lldD [H]
Identifier: 158423891
GI number: 158423891
Start: 2591558
End: 2592706
Strand: Reverse
Name: lldD [H]
Synonym: AZC_2267
Alternate gene names: 158423891
Gene position: 2592706-2591558 (Counterclockwise)
Preceding gene: 158423892
Following gene: 158423888
Centisome position: 48.28
GC content: 68.58
Gene sequence:
>1149_bases GTGGCGCCCGTCACCAATATTGCCGATCTGCGCGACATCGCGCGCCGCCGCATTCCGCGTGCCATGTTCGAATATGCCCA GCGCGGCTCCTATGACGAGCGCACGCTCGCCGCCAATTATGCCGAACTCGATGCGCTCCGCCTGCGCCAGCGTGTGATGG TGGACGTCTCGAAGCGCAATGTTGCGACCACCTTCCTGGGACAGGACGTCACCATCCCGGTGGGCATCGCGCCCACTGGC CTCACCGGGCTGTTTCATGCCGATGGCGAGATCCTCGGCGCGCGGGCCGCGCAGGCCTTCGGCGTGCCCTTCACGCTCAG CACCATGTCCATCTGCTCCATCGAGGATGTGGCGGGGGCGGTGGACAAGCCTTTCTGGTTCCAGCTCTATGTGATGCGGG ACCGGGCCTTCACCCAGTCGCTGGTGGAGCGGGCGCGCGCCGCCGGCTGCCCGGTGCTGGTGCTGACGCTGGATCTCGCC GCCCACGGCCAGCGCCATCGCGACATCAAGAACGGCCTCAGCGTGCCGCCGCGCCTCACCCTCGCCAATGCGCTCGACAT CGCCACCAAGCCCGGCTGGGCGCTGAACGTGTTGCGCGGCCAGCGCCGCAGCTTCGGCAATCTTCAGGGCTGGATGCCGG CGGGCAAGAATCTCAACGCCATGGCCCAGTGGGTGGCGCAGCAGTTCGACCCCTCTCTGAGCTGGAAGGATGTCGCATGG ATCCGGAGCCTGTGGCCCGGCAAGCTGGTCCTGAAGGGCATCCTTGATCCCGAGGACGCCCGCATCGCCGCCGACCATGG CGCGGATGCCATCGTCGTGTCGAACCATGGCGGACGCCAGCTTGACAGCGCTCCCGCCAGCATCAGCGTGCTGCCGGAGA TCGCCTCGGCGGTGGGCTCGCGCACGGAAATCCTGCTCGATGGCGGTATCCGCACCGGGCAGGACGTGCTGAAGGCGCTG GCGCTCGGCGCGCGGGGCTGCCTGATCGGCCGCTCCTGGCTTTATGGCCTCGCGGCAGGAGGGCAGGGGGGCGTGACGCA GGTGCTTGAAATCCTGCGCAAGGAACTCGACACCAGCATGGCCCTCGCCGGCCTCACGGACGTGCGCAGCGTCACTCCCG CCGCGCTCCACACGCCGCGCCGGGTCTGA
Upstream 100 bases:
>100_bases GCGGCAGCGCCGGCGCTTCCGTTGCCGGCTCGCCGGGTCTAAGAGCTTCGACGCGCGCGCCATCCGGTGCGCGCGTTTTG CGTTCCGATGAGGCTTTGCC
Downstream 100 bases:
>100_bases GCCGCCTTTAGGCCGCGGCCTTGCGCCAACCGGCGGCGAGCAGGCCGGCCCCCATCAACAACCCGCCCCCGGCGCGATTG ACGGCGCGCCGGGCGGTAAC
Product: L-lactate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MAPVTNIADLRDIARRRIPRAMFEYAQRGSYDERTLAANYAELDALRLRQRVMVDVSKRNVATTFLGQDVTIPVGIAPTG LTGLFHADGEILGARAAQAFGVPFTLSTMSICSIEDVAGAVDKPFWFQLYVMRDRAFTQSLVERARAAGCPVLVLTLDLA AHGQRHRDIKNGLSVPPRLTLANALDIATKPGWALNVLRGQRRSFGNLQGWMPAGKNLNAMAQWVAQQFDPSLSWKDVAW IRSLWPGKLVLKGILDPEDARIAADHGADAIVVSNHGGRQLDSAPASISVLPEIASAVGSRTEILLDGGIRTGQDVLKAL ALGARGCLIGRSWLYGLAAGGQGGVTQVLEILRKELDTSMALAGLTDVRSVTPAALHTPRRV
Sequences:
>Translated_382_residues MAPVTNIADLRDIARRRIPRAMFEYAQRGSYDERTLAANYAELDALRLRQRVMVDVSKRNVATTFLGQDVTIPVGIAPTG LTGLFHADGEILGARAAQAFGVPFTLSTMSICSIEDVAGAVDKPFWFQLYVMRDRAFTQSLVERARAAGCPVLVLTLDLA AHGQRHRDIKNGLSVPPRLTLANALDIATKPGWALNVLRGQRRSFGNLQGWMPAGKNLNAMAQWVAQQFDPSLSWKDVAW IRSLWPGKLVLKGILDPEDARIAADHGADAIVVSNHGGRQLDSAPASISVLPEIASAVGSRTEILLDGGIRTGQDVLKAL ALGARGCLIGRSWLYGLAAGGQGGVTQVLEILRKELDTSMALAGLTDVRSVTPAALHTPRRV >Mature_381_residues APVTNIADLRDIARRRIPRAMFEYAQRGSYDERTLAANYAELDALRLRQRVMVDVSKRNVATTFLGQDVTIPVGIAPTGL TGLFHADGEILGARAAQAFGVPFTLSTMSICSIEDVAGAVDKPFWFQLYVMRDRAFTQSLVERARAAGCPVLVLTLDLAA HGQRHRDIKNGLSVPPRLTLANALDIATKPGWALNVLRGQRRSFGNLQGWMPAGKNLNAMAQWVAQQFDPSLSWKDVAWI RSLWPGKLVLKGILDPEDARIAADHGADAIVVSNHGGRQLDSAPASISVLPEIASAVGSRTEILLDGGIRTGQDVLKALA LGARGCLIGRSWLYGLAAGGQGGVTQVLEILRKELDTSMALAGLTDVRSVTPAALHTPRRV
Specific function: Unknown
COG id: COG1304
COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FMN hydroxy acid dehydrogenase domain [H]
Homologues:
Organism=Homo sapiens, GI11068137, Length=366, Percent_Identity=39.0710382513661, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI54234014, Length=367, Percent_Identity=38.6920980926431, Blast_Score=244, Evalue=9e-65, Organism=Homo sapiens, GI7705393, Length=367, Percent_Identity=38.6920980926431, Blast_Score=244, Evalue=9e-65, Organism=Escherichia coli, GI1790033, Length=374, Percent_Identity=44.9197860962567, Blast_Score=337, Evalue=7e-94, Organism=Caenorhabditis elegans, GI193208036, Length=368, Percent_Identity=36.6847826086957, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI32566217, Length=287, Percent_Identity=34.1463414634146, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6323587, Length=390, Percent_Identity=33.5897435897436, Blast_Score=192, Evalue=7e-50, Organism=Drosophila melanogaster, GI78707188, Length=369, Percent_Identity=39.8373983739837, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI281363140, Length=369, Percent_Identity=39.8373983739837, Blast_Score=268, Evalue=6e-72, Organism=Drosophila melanogaster, GI78707190, Length=369, Percent_Identity=39.8373983739837, Blast_Score=268, Evalue=6e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR012133 - InterPro: IPR000262 - InterPro: IPR008259 - InterPro: IPR020920 [H]
Pfam domain/function: PF01070 FMN_dh [H]
EC number: =1.1.2.3 [H]
Molecular weight: Translated: 41151; Mature: 41020
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00557 FMN_HYDROXY_ACID_DH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPVTNIADLRDIARRRIPRAMFEYAQRGSYDERTLAANYAELDALRLRQRVMVDVSKRN CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VATTFLGQDVTIPVGIAPTGLTGLFHADGEILGARAAQAFGVPFTLSTMSICSIEDVAGA EEEEECCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHC VDKPFWFQLYVMRDRAFTQSLVERARAAGCPVLVLTLDLAAHGQRHRDIKNGLSVPPRLT CCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHCCCCCCCCEE LANALDIATKPGWALNVLRGQRRSFGNLQGWMPAGKNLNAMAQWVAQQFDPSLSWKDVAW HHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH IRSLWPGKLVLKGILDPEDARIAADHGADAIVVSNHGGRQLDSAPASISVLPEIASAVGS HHHCCCCHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC RTEILLDGGIRTGQDVLKALALGARGCLIGRSWLYGLAAGGQGGVTQVLEILRKELDTSM CEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ALAGLTDVRSVTPAALHTPRRV HHHHHHHHHHCCHHHHCCCCCC >Mature Secondary Structure APVTNIADLRDIARRRIPRAMFEYAQRGSYDERTLAANYAELDALRLRQRVMVDVSKRN CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VATTFLGQDVTIPVGIAPTGLTGLFHADGEILGARAAQAFGVPFTLSTMSICSIEDVAGA EEEEECCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHC VDKPFWFQLYVMRDRAFTQSLVERARAAGCPVLVLTLDLAAHGQRHRDIKNGLSVPPRLT CCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHCCCCCCCCEE LANALDIATKPGWALNVLRGQRRSFGNLQGWMPAGKNLNAMAQWVAQQFDPSLSWKDVAW HHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH IRSLWPGKLVLKGILDPEDARIAADHGADAIVVSNHGGRQLDSAPASISVLPEIASAVGS HHHCCCCHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC RTEILLDGGIRTGQDVLKALALGARGCLIGRSWLYGLAAGGQGGVTQVLEILRKELDTSM CEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ALAGLTDVRSVTPAALHTPRRV HHHHHHHHHHCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA