| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is blh [H]
Identifier: 158423706
GI number: 158423706
Start: 2397137
End: 2398030
Strand: Reverse
Name: blh [H]
Synonym: AZC_2082
Alternate gene names: 158423706
Gene position: 2398030-2397137 (Counterclockwise)
Preceding gene: 158423707
Following gene: 158423705
Centisome position: 44.66
GC content: 63.98
Gene sequence:
>894_bases ATGCTCCCGATCCCGCACGCCGTTGACCTGTCCGTCAAACCGGAGGTGACCGCCTTCTTCGACGCGCCCACCAACACCGT GAGCTATGTGGTGAAGGACCCGCAGTCGAACGCCTGTGCCGTCATCGACAGCGTCATGGACATCGATTACGCGGCCGGCC GCATCGCCTTCCAGTCCGCAGACGCGATCATCGCGTTCATCCAGGACCACGGACTCCGGCTGGAATGGCTCATCGAGACC CACGCGCATGCCGATCATCTTTCCGCCGCGCCTTATATCCAGCGGACCCTCGGCGGACAGATGGGTATCGGTGAAAACAT CACCATCGTTCAGGAGACCTTCGGCAAGATCTTCAACGAAGGCACGGAATTCCAGCGCGACGGCAGCCAGTTCGACCGGC TGTTCAAGGACGGCGATACCTACCGGATCGGTAGCATGACGGCCTTCGCCATGCACACGCCCGGCCATACGCCCGCCTGC ATGACCCACGTGATCGGCAATGCCGCCTTTGTCGGCGACACGCTGTTCATGCCTGACGGCGGCACGGCGCGGGCCGACTT TCCGGGCGGCGACGCGCACGTGCTCTACCGTTCGATCAAGCGCGTTTTGGCCCTGCCGCCCGAGACCCGCCTGTTCATGT GTCACGACTACGGCCCGAACGGCCGCGACATCCGCTGGGAGACCACGGTGGCCGATGAACGGGCGCACAACATTCACGTG CGCGACGGGGTGAGCGAAGAGGAGTTCGTCGCCATGCGCACAGCCCGCGACGCGACCCTCGACATGCCGCGCCTCATCAT TCCCTCCATCCAGGTAAACATCCGTGCTGGCGAACTACCGCCGCCCGACGAGACGGGAAAGCGGTTCCTCAAGGTGCCGA TCAACGGCCTGTGA
Upstream 100 bases:
>100_bases ATGGCCCTCGCCCGCTGGCTCGCCGGGCGGAGCCATCCCTCCACGGCCCAGGGCACCGATGCCCTGAAGACCCGCCCCTG AAACAAACGGAGACGCTTCC
Downstream 100 bases:
>100_bases CCTCTCTGCCCCGATCCGTGTAGCCCCTGCGCGATCGGGGCGCTTTTCTCCGTTCCGGCTGGAGCCCGCCCGTGCCCGCC TCCCTCCTCACCGATGGCCT
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLPIPHAVDLSVKPEVTAFFDAPTNTVSYVVKDPQSNACAVIDSVMDIDYAAGRIAFQSADAIIAFIQDHGLRLEWLIET HAHADHLSAAPYIQRTLGGQMGIGENITIVQETFGKIFNEGTEFQRDGSQFDRLFKDGDTYRIGSMTAFAMHTPGHTPAC MTHVIGNAAFVGDTLFMPDGGTARADFPGGDAHVLYRSIKRVLALPPETRLFMCHDYGPNGRDIRWETTVADERAHNIHV RDGVSEEEFVAMRTARDATLDMPRLIIPSIQVNIRAGELPPPDETGKRFLKVPINGL
Sequences:
>Translated_297_residues MLPIPHAVDLSVKPEVTAFFDAPTNTVSYVVKDPQSNACAVIDSVMDIDYAAGRIAFQSADAIIAFIQDHGLRLEWLIET HAHADHLSAAPYIQRTLGGQMGIGENITIVQETFGKIFNEGTEFQRDGSQFDRLFKDGDTYRIGSMTAFAMHTPGHTPAC MTHVIGNAAFVGDTLFMPDGGTARADFPGGDAHVLYRSIKRVLALPPETRLFMCHDYGPNGRDIRWETTVADERAHNIHV RDGVSEEEFVAMRTARDATLDMPRLIIPSIQVNIRAGELPPPDETGKRFLKVPINGL >Mature_297_residues MLPIPHAVDLSVKPEVTAFFDAPTNTVSYVVKDPQSNACAVIDSVMDIDYAAGRIAFQSADAIIAFIQDHGLRLEWLIET HAHADHLSAAPYIQRTLGGQMGIGENITIVQETFGKIFNEGTEFQRDGSQFDRLFKDGDTYRIGSMTAFAMHTPGHTPAC MTHVIGNAAFVGDTLFMPDGGTARADFPGGDAHVLYRSIKRVLALPPETRLFMCHDYGPNGRDIRWETTVADERAHNIHV RDGVSEEEFVAMRTARDATLDMPRLIIPSIQVNIRAGELPPPDETGKRFLKVPINGL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=266, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17538952, Length=272, Percent_Identity=25.3676470588235, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI221330176, Length=269, Percent_Identity=27.5092936802974, Blast_Score=101, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32686; Mature: 32686
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPIPHAVDLSVKPEVTAFFDAPTNTVSYVVKDPQSNACAVIDSVMDIDYAAGRIAFQSA CCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECC DAIIAFIQDHGLRLEWLIETHAHADHLSAAPYIQRTLGGQMGIGENITIVQETFGKIFNE CEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHHHHHCC GTEFQRDGSQFDRLFKDGDTYRIGSMTAFAMHTPGHTPACMTHVIGNAAFVGDTLFMPDG CCCHHCCHHHHHHHHHCCCCEEECCEEEEEEECCCCCHHHHHHHHCCEEEECCEEECCCC GTARADFPGGDAHVLYRSIKRVLALPPETRLFMCHDYGPNGRDIRWETTVADERAHNIHV CCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEE RDGVSEEEFVAMRTARDATLDMPRLIIPSIQVNIRAGELPPPDETGKRFLKVPINGL CCCCCHHHHEEHHHCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MLPIPHAVDLSVKPEVTAFFDAPTNTVSYVVKDPQSNACAVIDSVMDIDYAAGRIAFQSA CCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECC DAIIAFIQDHGLRLEWLIETHAHADHLSAAPYIQRTLGGQMGIGENITIVQETFGKIFNE CEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHHHHHCC GTEFQRDGSQFDRLFKDGDTYRIGSMTAFAMHTPGHTPACMTHVIGNAAFVGDTLFMPDG CCCHHCCHHHHHHHHHCCCCEEECCEEEEEEECCCCCHHHHHHHHCCEEEECCEEECCCC GTARADFPGGDAHVLYRSIKRVLALPPETRLFMCHDYGPNGRDIRWETTVADERAHNIHV CCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEE RDGVSEEEFVAMRTARDATLDMPRLIIPSIQVNIRAGELPPPDETGKRFLKVPINGL CCCCCHHHHEEHHHCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]