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The map label for this gene is yliD [C]

Identifier: 158423702

GI number: 158423702

Start: 2392144

End: 2393031

Strand: Reverse

Name: yliD [C]

Synonym: AZC_2078

Alternate gene names: 158423702

Gene position: 2393031-2392144 (Counterclockwise)

Preceding gene: 158423703

Following gene: 158423701

Centisome position: 44.56

GC content: 66.55

Gene sequence:

>888_bases
ATGGCCGCCTCCTCTCCCAGTGATGCGGGCGCCCTGCCCGTCAGCCGGCCGCGCTATCTGCCGAACCTGTCGCGGCTGCG
CTTCGCGCCGACGGTCGCCGCCGTCTGCCTCGTGCTGATCGCCGCCATGGCGCTCCTCGCGCCGCTGCTGGCCCCGCATG
ATCCCATCACCATGCTGCCGACGCAGCGGCTGAAGCCGCCCAGCCCCATGTATCTGCTCGGCACGGATTCCTACGGCCGC
GACCTACTTTCTCGGCTCATCTATGGCGCGCGGGTCTCGCTCATCGTCGGGCTGGGGGTGATGGTCATCTCCATCGCCAT
CGGCCTGCCGCTCGGCCTGCTGTCGGGCTATTTCCGCACGCTGGATGCCATCCTCATGCGGGTGATGGACGGCCTCATGG
CCATTCCGAGCGTACTGCTCGCCATCGCCGTGGTGTCGCTCTCCGGCTCGTCGCTGACGACGGTGATGATCGCCATCACC
ATTCCCGAGGTGCCGCGCGTGGTGCGCCTTGTGCGCTCTGTGGTGCTCTCCGCGCGCAACGAGCCTTATGTGGAGGCGGC
CATCGCCATGGGCACGCGCCTGCCGGCTCTGCTCTATCGCCACCTGATGCCCAACACCTATGCGCCGCTGATCGTGCAGG
GCACCTATATCTGCGCCTCGGCCATCGTGACGGAAGCCATCCTTTCCTTCCTCGGCGCCGGCATCGGCACCGAGACTCCC
TCCTGGGGCAACATGATCTCGGAGGGGCGCATGTACTTCCAGCTGAAGCCCATGCTCATCTTCTGGCCGGGCCTGCTTCT
CTCGATGTGCATCCTGTCCGTGAATCTGATCGGCGATGCCGCCCGAGACGTACTCGACCCGCGGCTCAAGAAGAGGACCG
GCGCATGA

Upstream 100 bases:

>100_bases
TCATACAGGGGCTGATCCTTCTCACCTCCGGCATCTATGTGTTCATCAACCTGATGGTCGATCTCTCCTATTCCCTGCTG
GACCCGAGGATCCGCTACTG

Downstream 100 bases:

>100_bases
GCGGCACCCCTTCCCCCATCCTGACCATCGACAATCTGTGTGTCGACATCGCCGCGCTCAAGCGGCGGGTTCTTGACGGC
ATCTCCCTCTCCATCGCGCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MAASSPSDAGALPVSRPRYLPNLSRLRFAPTVAAVCLVLIAAMALLAPLLAPHDPITMLPTQRLKPPSPMYLLGTDSYGR
DLLSRLIYGARVSLIVGLGVMVISIAIGLPLGLLSGYFRTLDAILMRVMDGLMAIPSVLLAIAVVSLSGSSLTTVMIAIT
IPEVPRVVRLVRSVVLSARNEPYVEAAIAMGTRLPALLYRHLMPNTYAPLIVQGTYICASAIVTEAILSFLGAGIGTETP
SWGNMISEGRMYFQLKPMLIFWPGLLLSMCILSVNLIGDAARDVLDPRLKKRTGA

Sequences:

>Translated_295_residues
MAASSPSDAGALPVSRPRYLPNLSRLRFAPTVAAVCLVLIAAMALLAPLLAPHDPITMLPTQRLKPPSPMYLLGTDSYGR
DLLSRLIYGARVSLIVGLGVMVISIAIGLPLGLLSGYFRTLDAILMRVMDGLMAIPSVLLAIAVVSLSGSSLTTVMIAIT
IPEVPRVVRLVRSVVLSARNEPYVEAAIAMGTRLPALLYRHLMPNTYAPLIVQGTYICASAIVTEAILSFLGAGIGTETP
SWGNMISEGRMYFQLKPMLIFWPGLLLSMCILSVNLIGDAARDVLDPRLKKRTGA
>Mature_294_residues
AASSPSDAGALPVSRPRYLPNLSRLRFAPTVAAVCLVLIAAMALLAPLLAPHDPITMLPTQRLKPPSPMYLLGTDSYGRD
LLSRLIYGARVSLIVGLGVMVISIAIGLPLGLLSGYFRTLDAILMRVMDGLMAIPSVLLAIAVVSLSGSSLTTVMIAITI
PEVPRVVRLVRSVVLSARNEPYVEAAIAMGTRLPALLYRHLMPNTYAPLIVQGTYICASAIVTEAILSFLGAGIGTETPS
WGNMISEGRMYFQLKPMLIFWPGLLLSMCILSVNLIGDAARDVLDPRLKKRTGA

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=291, Percent_Identity=36.0824742268041, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1787760, Length=257, Percent_Identity=40.0778210116732, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1789964, Length=256, Percent_Identity=41.796875, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1789889, Length=242, Percent_Identity=36.7768595041322, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1787498, Length=280, Percent_Identity=33.2142857142857, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787549, Length=253, Percent_Identity=35.1778656126482, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788505, Length=229, Percent_Identity=31.0043668122271, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31535; Mature: 31404

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASSPSDAGALPVSRPRYLPNLSRLRFAPTVAAVCLVLIAAMALLAPLLAPHDPITMLP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
TQRLKPPSPMYLLGTDSYGRDLLSRLIYGARVSLIVGLGVMVISIAIGLPLGLLSGYFRT
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDAILMRVMDGLMAIPSVLLAIAVVSLSGSSLTTVMIAITIPEVPRVVRLVRSVVLSARN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC
EPYVEAAIAMGTRLPALLYRHLMPNTYAPLIVQGTYICASAIVTEAILSFLGAGIGTETP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
SWGNMISEGRMYFQLKPMLIFWPGLLLSMCILSVNLIGDAARDVLDPRLKKRTGA
CHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC
>Mature Secondary Structure 
AASSPSDAGALPVSRPRYLPNLSRLRFAPTVAAVCLVLIAAMALLAPLLAPHDPITMLP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
TQRLKPPSPMYLLGTDSYGRDLLSRLIYGARVSLIVGLGVMVISIAIGLPLGLLSGYFRT
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDAILMRVMDGLMAIPSVLLAIAVVSLSGSSLTTVMIAITIPEVPRVVRLVRSVVLSARN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC
EPYVEAAIAMGTRLPALLYRHLMPNTYAPLIVQGTYICASAIVTEAILSFLGAGIGTETP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
SWGNMISEGRMYFQLKPMLIFWPGLLLSMCILSVNLIGDAARDVLDPRLKKRTGA
CHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]