| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423664
Identifier: 158423664
GI number: 158423664
Start: 2352712
End: 2353311
Strand: Reverse
Name: 158423664
Synonym: AZC_2040
Alternate gene names: NA
Gene position: 2353311-2352712 (Counterclockwise)
Preceding gene: 158423665
Following gene: 158423662
Centisome position: 43.83
GC content: 69.83
Gene sequence:
>600_bases ATGGACGTTCTTGAGCTGGAACGCGCGCCGTTGCGCCAGGAAAGCCGCGCGAAGCGCATGAAAGCGGCCACCCAGGCGGC CCACGAACGGATCGACCGCCAGATCATGGCCGCTGATCCCTTCGCCTCGCGCGAGAATTTCGGCCGCTTCGTTCGCCTGC AGTACCGCATTCACCACGCCGTCGACCCGCTGTTCCGCAGCCCGGCCCTCGCCGCGCTTCTGCCGGATCTGGCGGGCCGC CGACGGCTGGACCTCGTGGAACAGGACGCCGCCGATCTCGGCGTCAGCCTCCCTGAGTTGCCTGCGGCGTCGGACGCCCC GGCCGATGTCGCCTCCGCTCTCGGCTGGCTCTATGTGGTGGAGGGCTCGAACCTCGGCGCCGCCTTTCTGCTGAAGGCGG CCGCAAAGCTCAATCTCAATGAGGATTTCGGGGCGCGCCATCTCGCCGGCCATCCCGCGGGCCGCGGCCTGCACTGGCGC ACGTTCACGGCGGCGCTCGACGCCGTTCCCCTCTCGGAGGCGGATGAAGCCCGCGCCGTTGCAGGCGCCGAAGCCGCCTT TGCCATGGTCGCCGACCGGATCGCGGTCGAGTTCGCCTGA
Upstream 100 bases:
>100_bases GAAAGACGTTATATGGTCAGTTCAGGTACCCATTTTCAGCCATTAACCGGAAATGAGTACATAGGAATTGGAAGCATTTT AAGTTGAAGGAGCGGTTTTC
Downstream 100 bases:
>100_bases TCCCACGGTGCCGCGCCACGGCGCGGCGCCTCTCAGCCGAGCGCGTGGCTCGCGAGGGCGAAGACCCGCGGGCCATCCGC CGGGATGCGCGGCAGGAAGG
Product: heme oxygenase
Products: NA
Alternate protein names: Haem Utilisation Protein; Heme Oxygenase Family Protein; Iron-Starvation Protein; Iron-Starvation Protein PigA; Heme Oxygenase Superfamily; Heme Oxygenase-Like Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDVLELERAPLRQESRAKRMKAATQAAHERIDRQIMAADPFASRENFGRFVRLQYRIHHAVDPLFRSPALAALLPDLAGR RRLDLVEQDAADLGVSLPELPAASDAPADVASALGWLYVVEGSNLGAAFLLKAAAKLNLNEDFGARHLAGHPAGRGLHWR TFTAALDAVPLSEADEARAVAGAEAAFAMVADRIAVEFA
Sequences:
>Translated_199_residues MDVLELERAPLRQESRAKRMKAATQAAHERIDRQIMAADPFASRENFGRFVRLQYRIHHAVDPLFRSPALAALLPDLAGR RRLDLVEQDAADLGVSLPELPAASDAPADVASALGWLYVVEGSNLGAAFLLKAAAKLNLNEDFGARHLAGHPAGRGLHWR TFTAALDAVPLSEADEARAVAGAEAAFAMVADRIAVEFA >Mature_199_residues MDVLELERAPLRQESRAKRMKAATQAAHERIDRQIMAADPFASRENFGRFVRLQYRIHHAVDPLFRSPALAALLPDLAGR RRLDLVEQDAADLGVSLPELPAASDAPADVASALGWLYVVEGSNLGAAFLLKAAAKLNLNEDFGARHLAGHPAGRGLHWR TFTAALDAVPLSEADEARAVAGAEAAFAMVADRIAVEFA
Specific function: Unknown
COG id: COG3230
COG function: function code P; Heme oxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21454; Mature: 21454
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLELERAPLRQESRAKRMKAATQAAHERIDRQIMAADPFASRENFGRFVRLQYRIHHA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEHHHHHHHH VDPLFRSPALAALLPDLAGRRRLDLVEQDAADLGVSLPELPAASDAPADVASALGWLYVV HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCEEEEE EGSNLGAAFLLKAAAKLNLNEDFGARHLAGHPAGRGLHWRTFTAALDAVPLSEADEARAV ECCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH AGAEAAFAMVADRIAVEFA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDVLELERAPLRQESRAKRMKAATQAAHERIDRQIMAADPFASRENFGRFVRLQYRIHHA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEHHHHHHHH VDPLFRSPALAALLPDLAGRRRLDLVEQDAADLGVSLPELPAASDAPADVASALGWLYVV HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCEEEEE EGSNLGAAFLLKAAAKLNLNEDFGARHLAGHPAGRGLHWRTFTAALDAVPLSEADEARAV ECCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH AGAEAAFAMVADRIAVEFA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA