Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158423633

Identifier: 158423633

GI number: 158423633

Start: 2317499

End: 2318299

Strand: Reverse

Name: 158423633

Synonym: AZC_2009

Alternate gene names: NA

Gene position: 2318299-2317499 (Counterclockwise)

Preceding gene: 158423635

Following gene: 158423622

Centisome position: 43.17

GC content: 66.29

Gene sequence:

>801_bases
ATGGCCCATGCCTTCAACCGCGAAACCGCTCCGCAAGCCGGAGCGGCGGCGTCCAACCGCCCGGCGCTCGATGGGGAGGA
GGTGTGGAACGCCCGCGTGGAGCTCGCCGCCTGTTTCCGCTTCGCCGCCCGTCTCGGCATGCACGAGGGCATCTGCAACC
ACTTCTCCGCCGTCGTGCCGGGCCATGATGACCTCTTCCTGGTCAATCCCTACGGCTACGCGTTCAGCGAGATCACCGCG
TCCCATCTGCTGGTGTGCGATTTCCACGGCAACGTGCTTTCGGGCAGCGGCGTGCCGGAAGCGACTGCCTTCTTCATCCA
TGCCCGCATGCACCTCAACGTGCCGCGCGCCCGCGTCGCCTTCCACACCCACATGCCCTATGCCACCGCGCTCTCGATGG
TGGAGGGCGAGCCGCTTGTCTTCGCCGGCCAGACGGCGTTGAAGTTCTACGGCCGCACGGTGGTGGACCACGATTATAAC
GGCCTCGCCCTCGACAGCACGGAAGGCGACCGCATCGCTGCCTCCGTCGGGGATGCGGACATCGTCTTCATGAAGCACCA
TGGCGTCATGGTGCTCGGCCGCACCATCGCGGAGGCGTGGGACGATCTCTATTATCTGGAACGGGCTTGCGAGGTGCAGT
GCCTCGCCATGGCCACCGGCCGCCCCGTTCTGCCGGTGAAGACCGAAATTGCCGAAGCTGCCGCCCGGCAGATGCGCGAG
GGAGATGCGGAATCCGCCCGCCTGCACCTCGAAAGCATGAAGCGCATCCTCGACCGCGAAGAGCCCGCCTACCGCACCTG
A

Upstream 100 bases:

>100_bases
GCCCGTGCATGTCGTGGTGCCCGAGCCCTTCGGGCGCCGGTCTTTCAGGAAGCCGACCGCGATCGAGCATCGCTCCGGCT
CCGATGCAGGAGAGAAGTCC

Downstream 100 bases:

>100_bases
GGGGCGATCGAACTGGTCGTCAGGCGTCGCCGGCCACCCCCCGGCGCGCCTTGTCCAGTTCGTCCGCATAGCGACGCAGC
AGGAAGGCCTCGCTGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVPGHDDLFLVNPYGYAFSEITA
SHLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVAFHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYN
GLALDSTEGDRIAASVGDADIVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMRE
GDAESARLHLESMKRILDREEPAYRT

Sequences:

>Translated_266_residues
MAHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVPGHDDLFLVNPYGYAFSEITA
SHLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVAFHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYN
GLALDSTEGDRIAASVGDADIVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMRE
GDAESARLHLESMKRILDREEPAYRT
>Mature_265_residues
AHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVPGHDDLFLVNPYGYAFSEITAS
HLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVAFHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYNG
LALDSTEGDRIAASVGDADIVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMREG
DAESARLHLESMKRILDREEPAYRT

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826323, Length=232, Percent_Identity=29.7413793103448, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI29826325, Length=232, Percent_Identity=29.7413793103448, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI29826321, Length=193, Percent_Identity=30.0518134715026, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI29826319, Length=193, Percent_Identity=30.0518134715026, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI9257190, Length=195, Percent_Identity=28.7179487179487, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI297307158, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI9257192, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI297307160, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI89276787, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI9943848, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9951927, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI62912453, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115533216, Length=201, Percent_Identity=28.8557213930348, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI115533218, Length=202, Percent_Identity=28.7128712871287, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71989550, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71989560, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71989555, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71989541, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71989544, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24655685, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281363755, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281363751, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24655690, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281363761, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281363759, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281363753, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281363763, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI281363757, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI17136738, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 29170; Mature: 29039

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEECC
GHDDLFLVNPYGYAFSEITASHLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVA
CCCCEEEECCCCCHHHHHCCCEEEEEECCCCEECCCCCCCHHEEEEEEEEEECCCCCEEE
FHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYNGLALDSTEGDRIAASVGDAD
EEECCCHHHHHHHHCCCCEEEECCHHHHHHCCEEEECCCCCEEEECCCCCEEEEECCCCE
IVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMRE
EEEEECCCEEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHC
GDAESARLHLESMKRILDREEPAYRT
CCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEECC
GHDDLFLVNPYGYAFSEITASHLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVA
CCCCEEEECCCCCHHHHHCCCEEEEEECCCCEECCCCCCCHHEEEEEEEEEECCCCCEEE
FHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYNGLALDSTEGDRIAASVGDAD
EEECCCHHHHHHHHCCCCEEEECCHHHHHHCCEEEECCCCCEEEECCCCCEEEEECCCCE
IVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMRE
EEEEECCCEEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHC
GDAESARLHLESMKRILDREEPAYRT
CCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]