| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is mhpD2 [H]
Identifier: 158423579
GI number: 158423579
Start: 2256291
End: 2257046
Strand: Reverse
Name: mhpD2 [H]
Synonym: AZC_1955
Alternate gene names: 158423579
Gene position: 2257046-2256291 (Counterclockwise)
Preceding gene: 158423580
Following gene: 158423576
Centisome position: 42.03
GC content: 68.12
Gene sequence:
>756_bases ATGCTGATGGTCGCGTCTCATCTGGAAGCCAGCGTGGATGCGCTGGCCGAAGCCCGTCGCTCGAACACGCAGATCGACGG TCTGGCGCAGGCTCCCGCCTCCACGGACGAGGCCCATGCCATCCAGGACGTCGTTTTCGCGCGGCTCGGACTCGAAATCG GCGCCTACAAGGCGTCCACGCCCGTGGGGGCGCCGGAGAAGCGCGGTCTGATCCCGGCGGGCATGGTGCGCCAAAGCCCG GCGGCCATGCCCGCCGTCCAGGTTCCGCACTGCGGCGTGGAGGCTGAGGTTGCCTTCCGCTTCCTGCGCGACCTGCCGCC GCGCGAGACGCCCTATACACGCGAAGAGGTGGCAGCGGCCACGTCCGTTCTGCCCGCCATCGAGGTGCTGTCCAGCCGTT TCCGCTCGCCGCGCACACGGCCGGAACTGGAGCAGCTTGCCGATTGCATGATCAACGGCGGGCTTGTGCTCGGCGCAGAA ACAAAGAACTGGTCGCACCTGGACCTGCCCCGCCTCGAGGTGACTCTCACGATCAATGGCGAGACGGTGCTTCAGCGCAC CGGCGGCCATCCTACCGACGACCCGCTGGGCATCACGGTGGCGCTGGTCAACATGATGCGCATCGCCGGCGGCGTGAAGG CGGGGCAGTCGGTCGCGACCGGAAGCTGGTCGGGCATGCTGTTTCTGAAGCCCGGCGACACCTGCGTCGCATCCTTCTCC GGCCTCGGCACGGCGGAAGTCACCTTCTCCGCCTGA
Upstream 100 bases:
>100_bases GCTGTTCGAGGCGCCGGAAAGCGATTACACCCGCACCCTGCTCGCCGCCGTCCCGCATTTCGCCGGGGCGGCTTGAGCAG AGCCCACATAGCCCCGAGGA
Downstream 100 bases:
>100_bases TCGCGCCGCAGTGCCACCCGGCCCGGCCGGGTGGCTCAGGCCTCGCGGGCTGGCGCCACGGCAAGCACCAGGCTCACGCA AAACAGGCCTTCGCGCATCT
Product: hydratase/decarboxylase family protein
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase 2 [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLMVASHLEASVDALAEARRSNTQIDGLAQAPASTDEAHAIQDVVFARLGLEIGAYKASTPVGAPEKRGLIPAGMVRQSP AAMPAVQVPHCGVEAEVAFRFLRDLPPRETPYTREEVAAATSVLPAIEVLSSRFRSPRTRPELEQLADCMINGGLVLGAE TKNWSHLDLPRLEVTLTINGETVLQRTGGHPTDDPLGITVALVNMMRIAGGVKAGQSVATGSWSGMLFLKPGDTCVASFS GLGTAEVTFSA
Sequences:
>Translated_251_residues MLMVASHLEASVDALAEARRSNTQIDGLAQAPASTDEAHAIQDVVFARLGLEIGAYKASTPVGAPEKRGLIPAGMVRQSP AAMPAVQVPHCGVEAEVAFRFLRDLPPRETPYTREEVAAATSVLPAIEVLSSRFRSPRTRPELEQLADCMINGGLVLGAE TKNWSHLDLPRLEVTLTINGETVLQRTGGHPTDDPLGITVALVNMMRIAGGVKAGQSVATGSWSGMLFLKPGDTCVASFS GLGTAEVTFSA >Mature_251_residues MLMVASHLEASVDALAEARRSNTQIDGLAQAPASTDEAHAIQDVVFARLGLEIGAYKASTPVGAPEKRGLIPAGMVRQSP AAMPAVQVPHCGVEAEVAFRFLRDLPPRETPYTREEVAAATSVLPAIEVLSSRFRSPRTRPELEQLADCMINGGLVLGAE TKNWSHLDLPRLEVTLTINGETVLQRTGGHPTDDPLGITVALVNMMRIAGGVKAGQSVATGSWSGMLFLKPGDTCVASFS GLGTAEVTFSA
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=209, Percent_Identity=29.1866028708134, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 26454; Mature: 26454
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMVASHLEASVDALAEARRSNTQIDGLAQAPASTDEAHAIQDVVFARLGLEIGAYKAST CEEECCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHCCEECCC PVGAPEKRGLIPAGMVRQSPAAMPAVQVPHCGVEAEVAFRFLRDLPPRETPYTREEVAAA CCCCCHHCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH TSVLPAIEVLSSRFRSPRTRPELEQLADCMINGGLVLGAETKNWSHLDLPRLEVTLTING HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEECC ETVLQRTGGHPTDDPLGITVALVNMMRIAGGVKAGQSVATGSWSGMLFLKPGDTCVASFS CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEECCCCHHHHHHC GLGTAEVTFSA CCCEEEEEECC >Mature Secondary Structure MLMVASHLEASVDALAEARRSNTQIDGLAQAPASTDEAHAIQDVVFARLGLEIGAYKAST CEEECCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHCCEECCC PVGAPEKRGLIPAGMVRQSPAAMPAVQVPHCGVEAEVAFRFLRDLPPRETPYTREEVAAA CCCCCHHCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH TSVLPAIEVLSSRFRSPRTRPELEQLADCMINGGLVLGAETKNWSHLDLPRLEVTLTING HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEECC ETVLQRTGGHPTDDPLGITVALVNMMRIAGGVKAGQSVATGSWSGMLFLKPGDTCVASFS CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEECCCCHHHHHHC GLGTAEVTFSA CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA