| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423481
Identifier: 158423481
GI number: 158423481
Start: 2123382
End: 2124128
Strand: Reverse
Name: 158423481
Synonym: AZC_1857
Alternate gene names: NA
Gene position: 2124128-2123382 (Counterclockwise)
Preceding gene: 158423482
Following gene: 158423480
Centisome position: 39.56
GC content: 72.16
Gene sequence:
>747_bases ATGACCCAGCCGACCCACGCCCTCGCCGAGCGCCTCACCGCTGCCGAGCGCCGCCAGGACTCGCCCAATGTGCGCCCCCG CGATGCCGCCTCGCTGATCCTGGTGGACCGCAGCCGCAAGGCGCCGCGCATCCTCATGGGCCTGCGCCATCCCAGCCACC GCTTCATGCCCAACGTGTTCGTCTTCCCCGGCGGTCGCGTGGAAGCCAGCGACCGGGCCATGCCGGTCTATGGCATGCTC GACGCCGACAGCGAGCGGCGCCTGATGGCCAATGTCCAGCGGCCCTCCGCCCAGCGGGCGCGGGCGCTGGCCGCCGCCGC CATCCGCGAGACCTTCGAGGAGACCGGCCTGCTCATCGGCACCACCGAGGCGGGGGCGCCCGAGGCACCGGAGGGCGAAT GGAGCGCCTTTGCCGCGCAGGGCGTCTATCCCAATCTCGAGGCACTCTCCTTCGTGCTGCGGGCCATCACGCCGCCCCGC CGGCCGAAACGCTTCGACACCCGCTTCTTCCTCGCCGACGTGTCCGACGTCGCCCATCGCGTGGACGGCAAGGTGGGGCC GGATTCGGAACTCATCGAGCTGCGCTGGCTGACGGTCGAGGAAACGGCCAAGGCGGAACTGCCCACCATCACCCGCGTCG TGCTGGAGGAGGTGGGCGCACGGCTCGCCGCCGGCCTGCCCCGTCACGCGCCCGTGCCGTTCTACGCCATGCGCCGCGGC ACGTTCGTCCGGTCGCTGCTGGACTAG
Upstream 100 bases:
>100_bases GCCTTCAGTGGGCCCTGCGCATGCACGGCTTTGATCCCGATAGTCCCGAACACGAGGCCCTGCCGCCTGCCGCGGCCGCC GGAAAGACGCCGCTCACCCC
Downstream 100 bases:
>100_bases ACCGGCCGCAGCGCCTTTCCGTTGCCGCCGGGCCGATCTTCGGCGGCTGTCGCTTGTTCTGTTCACCCGCCCCCTGCCGG CGGGCCGAGGGTACCGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Nudix Family; Nudix Hydrolase; Hydrolase NUDIX Family; NUDIX Family Hydrolase; Hydrolase; LOW QUALITY PROTEIN NUDIX Hydrolase; Phosphohydrolase; MutT/Nudix Family Phosphohydrolase; NUDIX Superfamily Hydrolase
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTQPTHALAERLTAAERRQDSPNVRPRDAASLILVDRSRKAPRILMGLRHPSHRFMPNVFVFPGGRVEASDRAMPVYGML DADSERRLMANVQRPSAQRARALAAAAIRETFEETGLLIGTTEAGAPEAPEGEWSAFAAQGVYPNLEALSFVLRAITPPR RPKRFDTRFFLADVSDVAHRVDGKVGPDSELIELRWLTVEETAKAELPTITRVVLEEVGARLAAGLPRHAPVPFYAMRRG TFVRSLLD
Sequences:
>Translated_248_residues MTQPTHALAERLTAAERRQDSPNVRPRDAASLILVDRSRKAPRILMGLRHPSHRFMPNVFVFPGGRVEASDRAMPVYGML DADSERRLMANVQRPSAQRARALAAAAIRETFEETGLLIGTTEAGAPEAPEGEWSAFAAQGVYPNLEALSFVLRAITPPR RPKRFDTRFFLADVSDVAHRVDGKVGPDSELIELRWLTVEETAKAELPTITRVVLEEVGARLAAGLPRHAPVPFYAMRRG TFVRSLLD >Mature_247_residues TQPTHALAERLTAAERRQDSPNVRPRDAASLILVDRSRKAPRILMGLRHPSHRFMPNVFVFPGGRVEASDRAMPVYGMLD ADSERRLMANVQRPSAQRARALAAAAIRETFEETGLLIGTTEAGAPEAPEGEWSAFAAQGVYPNLEALSFVLRAITPPRR PKRFDTRFFLADVSDVAHRVDGKVGPDSELIELRWLTVEETAKAELPTITRVVLEEVGARLAAGLPRHAPVPFYAMRRGT FVRSLLD
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27470; Mature: 27339
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPTHALAERLTAAERRQDSPNVRPRDAASLILVDRSRKAPRILMGLRHPSHRFMPNVF CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCHHCCCEEE VFPGGRVEASDRAMPVYGMLDADSERRLMANVQRPSAQRARALAAAAIRETFEETGLLIG EECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE TTEAGAPEAPEGEWSAFAAQGVYPNLEALSFVLRAITPPRRPKRFDTRFFLADVSDVAHR ECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHH VDGKVGPDSELIELRWLTVEETAKAELPTITRVVLEEVGARLAAGLPRHAPVPFYAMRRG HCCCCCCCCCEEEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH TFVRSLLD HHHHHHCC >Mature Secondary Structure TQPTHALAERLTAAERRQDSPNVRPRDAASLILVDRSRKAPRILMGLRHPSHRFMPNVF CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCHHCCCEEE VFPGGRVEASDRAMPVYGMLDADSERRLMANVQRPSAQRARALAAAAIRETFEETGLLIG EECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE TTEAGAPEAPEGEWSAFAAQGVYPNLEALSFVLRAITPPRRPKRFDTRFFLADVSDVAHR ECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHH VDGKVGPDSELIELRWLTVEETAKAELPTITRVVLEEVGARLAAGLPRHAPVPFYAMRRG HCCCCCCCCCEEEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH TFVRSLLD HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA