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The map label for this gene is ycfF [C]

Identifier: 158423439

GI number: 158423439

Start: 2076328

End: 2076762

Strand: Reverse

Name: ycfF [C]

Synonym: AZC_1815

Alternate gene names: 158423439

Gene position: 2076762-2076328 (Counterclockwise)

Preceding gene: 158423440

Following gene: 158423438

Centisome position: 38.68

GC content: 66.21

Gene sequence:

>435_bases
ATGAGCGAGACGCCCGCCTACGATCCCAACAACGTCTTTGCCAAGATCCTGCGTGGCGAGCTGCCGGCCCACAAGGTCTA
TGAGGACGACCGGGCGCTCGTCTTCCTCGACATCATGCCGCGCGCGCCGGGCCATGCCCTCGTCATCCCGAAGGCCCCCG
CCCGCAACATCCTCGACATCGATCCCGAGGATCTCGCCTATGTGCACAAGGTGGCGCAGAAGGTGGCCAGAGCCGCCAAG
GGCGTGTTCAAGGCCGACGGCATCACCCTCCAGCAGTTCAGCGAGGAAGCTGGCGGGCAGGTGGTCTTCCATTTGCACGT
GCATGTGATCCCGCGCGTCGCCGGCGTCGCCATGAAGCCGCCCGCCAACGAAATGGAGAACAATGACGTGCTGGCCGACC
ACGCGGCCCGGCTCAAGGCCGCCCTCGCCGGCTGA

Upstream 100 bases:

>100_bases
GATGCGCATCTCCCGATGCGGGCGCCGCAGTCCGGCCGGCCGCTTTCCATGACAAGAGCAAGGGACGTGGCCCGCTGGGA
CCGTCCCCGGAGGACAGACC

Downstream 100 bases:

>100_bases
GCCCCTACGGCCAGGCTTATGCTGCGCCGCACGGAAGGGGCCTTCCCACCGTGGGCCCTTGGCCGGTATGCTTAACAAGC
CATTATGGTGCTTGACCGCG

Product: Hit-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSETPAYDPNNVFAKILRGELPAHKVYEDDRALVFLDIMPRAPGHALVIPKAPARNILDIDPEDLAYVHKVAQKVARAAK
GVFKADGITLQQFSEEAGGQVVFHLHVHVIPRVAGVAMKPPANEMENNDVLADHAARLKAALAG

Sequences:

>Translated_144_residues
MSETPAYDPNNVFAKILRGELPAHKVYEDDRALVFLDIMPRAPGHALVIPKAPARNILDIDPEDLAYVHKVAQKVARAAK
GVFKADGITLQQFSEEAGGQVVFHLHVHVIPRVAGVAMKPPANEMENNDVLADHAARLKAALAG
>Mature_143_residues
SETPAYDPNNVFAKILRGELPAHKVYEDDRALVFLDIMPRAPGHALVIPKAPARNILDIDPEDLAYVHKVAQKVARAAKG
VFKADGITLQQFSEEAGGQVVFHLHVHVIPRVAGVAMKPPANEMENNDVLADHAARLKAALAG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=40.9090909090909, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI4885413, Length=104, Percent_Identity=41.3461538461538, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17506713, Length=101, Percent_Identity=38.6138613861386, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320078, Length=147, Percent_Identity=34.0136054421769, Blast_Score=71, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28574010, Length=123, Percent_Identity=36.5853658536585, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24581222, Length=123, Percent_Identity=36.5853658536585, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15600; Mature: 15469

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETPAYDPNNVFAKILRGELPAHKVYEDDRALVFLDIMPRAPGHALVIPKAPARNILDI
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCC
DPEDLAYVHKVAQKVARAAKGVFKADGITLQQFSEEAGGQVVFHLHVHVIPRVAGVAMKP
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHCCCCEEEEEEEEEEHHHHHCCCCCC
PANEMENNDVLADHAARLKAALAG
CCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETPAYDPNNVFAKILRGELPAHKVYEDDRALVFLDIMPRAPGHALVIPKAPARNILDI
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCC
DPEDLAYVHKVAQKVARAAKGVFKADGITLQQFSEEAGGQVVFHLHVHVIPRVAGVAMKP
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHCCCCEEEEEEEEEEHHHHHCCCCCC
PANEMENNDVLADHAARLKAALAG
CCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978084; 9403685 [H]