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The map label for this gene is ynaI [C]

Identifier: 158423266

GI number: 158423266

Start: 1879819

End: 1881342

Strand: Direct

Name: ynaI [C]

Synonym: AZC_1642

Alternate gene names: 158423266

Gene position: 1879819-1881342 (Clockwise)

Preceding gene: 158423265

Following gene: 158423267

Centisome position: 35.01

GC content: 69.23

Gene sequence:

>1524_bases
ATGATCTCGGGCGGAACCGGACTCGCGGACGAGCTGCGCCTGCTCATCGCAGACCCGATGGTGCCGACCGCCGTCGCGGC
GCTGGCGGTCGCCCTCGGCCTCCGGCTCGCTCTGCGCGACCGTCCGTGGCCCCATCTCATCGGTCAGGTCGCCCTCCTGA
CCCTTCTGACGGCGCTTCTGACCTCGGAGGGCATCGTGCCCTACGAAGCCGGGGCGCAAGCGCCGCCGAGCCTGCACGGC
GGCTTCATGAGCCTCGCCAAGGTGGTCTGGTGGAGCAGCGCGGCTCTTTGCCTGGCCGGCTTCGTGCGCATGTTCCTCAT
CTTCGAGCGGCGGCCGCGCGAAGGCCGGCTGCTTCAGGACCTGCTGGTGGGCGTCATCTACGTGGGGGCGGCCTTGTCGG
TCGTCGCCGACGTCTTCTCCGTTCCGGTGGGCACGCTCATCGCCACATCCGGCGTCGTGGCCATCGTCCTTGGTCTCGCG
CTGCAAAGCACGCTGGCGGACCTGTTCTCGGGCATCGCGCTGAATATCAGCCGGCCCTATGGCGTGGGCGACTGGGTGAT
CCTGCCCAATGGCGTCGAAGGCCGGGTGATCGAGACCAACTGGCGGGCGACCCATCTGCTCAGCTCCGGCAATGATCTCG
TCATCCTGCCCAACAGCAACCTCGCCAAGGAGATGCTGACCAATGCCAGCGGGCCGGAGCGCCGCCATGGCGTGAAGCTG
CGGGTGCGCCTCGTGCCGACCCTTGCGCCGCTGGCGCTCGCACGTGTCCTGCGCGACGCGCTGTCGAGTTCCACGCTCAT
CCTCAGCCATCCGGCCCCCGCCGTGCATATCAAGACCCTCGACGCCCAGGCGGTGGATCTGGAGCTCTCCTTCCATGTCG
CGGAACTCGGCGCCTCTTCGGCGGCGAAGGACGAGATGTTCGATCTCGTCTACCGCCATGCCAAGGCGGCCGGCCTGCAT
CTCGCCGCGCCGGCCGGGGCGGGCGGCGACAGCGTGCCCCGGTCGGAGGTGTCCCAGCGCCCCCTCAGCCTGCGCCTCCT
GGATTCCGTCGCATTGTTCTCCAGCCTCAGCGAAGAGGAGAAAGCCGCGCTGGCGGATGCCATGGAGCAGCGCGCCTACC
GCAAGGACGAGGTGGTGGCGCGAGAGGGCGAGGTGCTGTCGGTGCTGATGATCGTGCGCAGCGGCATCCTGGGTCTCACC
CGCAGCGCGGATGCCCCCGGCGCGGAGATCCATCGTCTGGCTCCTGGCGATCTGATCGGCGAGGAGGGGGTACTGCTGGG
CGAAGGCGAGGCGGGCACGGTCCGGGCTTTGACCTATGTGGTGGCCTTCGCCATCGCCAAGGAAGCCCTCGCGCCGCTGC
TGAAGGATCGTCCGGGACTTGCGGACGAACTGGGCGCGCTTCTCGCGCAGCGCCGGGAGACCGCGCATCTGGAGGCCGCC
GCGCCCTGTGACCGGGAATGGGGCCGCTCCAGACTCGCCGAAGGCATCCGTGCCTTCATGCAGGTCCATCGCGGGCGAGG
GTAG

Upstream 100 bases:

>100_bases
ACAGTTTCCGGCTACGGGTGGAGCCCGACGGCAACGGCGGTGCTTACAGCCTCGAGTCCGGAATGACCGTCTTCCTGCCG
CCGACCCCGTCCGCGCGGCC

Downstream 100 bases:

>100_bases
GCGACCGGCTGCGCCGCACCGGCGCCATCCGTCCGGCACGGGCCCTCGCAATCCTCGGGCGTCCGGCGGCCCTCCTTTCG
GGTCGGTGCGCCGGAACGTC

Product: mechanosensitive ion channel protein

Products: NA

Alternate protein names: Integral Membrane Protein; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Protein; Mechanosensitive Channel Protein; Mechanosensitive Ion Channel Family Protein; Transporter MscS Family; Transmembrane Transporter; Small-Conductance Mechanosensitive Channel; Transmembrane Protein; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel MscS; MscS-Like Mechanosensitive Channel; Conserved Membrane Protein; Mechanosensitive Ion Channel Family Protein MscS; Transcriptional Regulator Crp/Fnr Family; Mechanosensitive Ion Channel Protein MscS; Small Conductance Mechanosensitive Channel; Potassium Efflux System KEFA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MISGGTGLADELRLLIADPMVPTAVAALAVALGLRLALRDRPWPHLIGQVALLTLLTALLTSEGIVPYEAGAQAPPSLHG
GFMSLAKVVWWSSAALCLAGFVRMFLIFERRPREGRLLQDLLVGVIYVGAALSVVADVFSVPVGTLIATSGVVAIVLGLA
LQSTLADLFSGIALNISRPYGVGDWVILPNGVEGRVIETNWRATHLLSSGNDLVILPNSNLAKEMLTNASGPERRHGVKL
RVRLVPTLAPLALARVLRDALSSSTLILSHPAPAVHIKTLDAQAVDLELSFHVAELGASSAAKDEMFDLVYRHAKAAGLH
LAAPAGAGGDSVPRSEVSQRPLSLRLLDSVALFSSLSEEEKAALADAMEQRAYRKDEVVAREGEVLSVLMIVRSGILGLT
RSADAPGAEIHRLAPGDLIGEEGVLLGEGEAGTVRALTYVVAFAIAKEALAPLLKDRPGLADELGALLAQRRETAHLEAA
APCDREWGRSRLAEGIRAFMQVHRGRG

Sequences:

>Translated_507_residues
MISGGTGLADELRLLIADPMVPTAVAALAVALGLRLALRDRPWPHLIGQVALLTLLTALLTSEGIVPYEAGAQAPPSLHG
GFMSLAKVVWWSSAALCLAGFVRMFLIFERRPREGRLLQDLLVGVIYVGAALSVVADVFSVPVGTLIATSGVVAIVLGLA
LQSTLADLFSGIALNISRPYGVGDWVILPNGVEGRVIETNWRATHLLSSGNDLVILPNSNLAKEMLTNASGPERRHGVKL
RVRLVPTLAPLALARVLRDALSSSTLILSHPAPAVHIKTLDAQAVDLELSFHVAELGASSAAKDEMFDLVYRHAKAAGLH
LAAPAGAGGDSVPRSEVSQRPLSLRLLDSVALFSSLSEEEKAALADAMEQRAYRKDEVVAREGEVLSVLMIVRSGILGLT
RSADAPGAEIHRLAPGDLIGEEGVLLGEGEAGTVRALTYVVAFAIAKEALAPLLKDRPGLADELGALLAQRRETAHLEAA
APCDREWGRSRLAEGIRAFMQVHRGRG
>Mature_507_residues
MISGGTGLADELRLLIADPMVPTAVAALAVALGLRLALRDRPWPHLIGQVALLTLLTALLTSEGIVPYEAGAQAPPSLHG
GFMSLAKVVWWSSAALCLAGFVRMFLIFERRPREGRLLQDLLVGVIYVGAALSVVADVFSVPVGTLIATSGVVAIVLGLA
LQSTLADLFSGIALNISRPYGVGDWVILPNGVEGRVIETNWRATHLLSSGNDLVILPNSNLAKEMLTNASGPERRHGVKL
RVRLVPTLAPLALARVLRDALSSSTLILSHPAPAVHIKTLDAQAVDLELSFHVAELGASSAAKDEMFDLVYRHAKAAGLH
LAAPAGAGGDSVPRSEVSQRPLSLRLLDSVALFSSLSEEEKAALADAMEQRAYRKDEVVAREGEVLSVLMIVRSGILGLT
RSADAPGAEIHRLAPGDLIGEEGVLLGEGEAGTVRALTYVVAFAIAKEALAPLLKDRPGLADELGALLAQRRETAHLEAA
APCDREWGRSRLAEGIRAFMQVHRGRG

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53596; Mature: 53596

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGGTGLADELRLLIADPMVPTAVAALAVALGLRLALRDRPWPHLIGQVALLTLLTALL
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TSEGIVPYEAGAQAPPSLHGGFMSLAKVVWWSSAALCLAGFVRMFLIFERRPREGRLLQD
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LLVGVIYVGAALSVVADVFSVPVGTLIATSGVVAIVLGLALQSTLADLFSGIALNISRPY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
GVGDWVILPNGVEGRVIETNWRATHLLSSGNDLVILPNSNLAKEMLTNASGPERRHGVKL
CCCCEEEECCCCCCCEEECCCCCCEEECCCCCEEEECCCHHHHHHHHCCCCCCHHCCEEE
RVRLVPTLAPLALARVLRDALSSSTLILSHPAPAVHIKTLDAQAVDLELSFHVAELGASS
EEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEEEEEEEHHHHHCCCC
AAKDEMFDLVYRHAKAAGLHLAAPAGAGGDSVPRSEVSQRPLSLRLLDSVALFSSLSEEE
CHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHH
KAALADAMEQRAYRKDEVVAREGEVLSVLMIVRSGILGLTRSADAPGAEIHRLAPGDLIG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHCCCCCCCCCCCEEECCCCCCCC
EEGVLLGEGEAGTVRALTYVVAFAIAKEALAPLLKDRPGLADELGALLAQRRETAHLEAA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
APCDREWGRSRLAEGIRAFMQVHRGRG
CCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISGGTGLADELRLLIADPMVPTAVAALAVALGLRLALRDRPWPHLIGQVALLTLLTALL
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TSEGIVPYEAGAQAPPSLHGGFMSLAKVVWWSSAALCLAGFVRMFLIFERRPREGRLLQD
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LLVGVIYVGAALSVVADVFSVPVGTLIATSGVVAIVLGLALQSTLADLFSGIALNISRPY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
GVGDWVILPNGVEGRVIETNWRATHLLSSGNDLVILPNSNLAKEMLTNASGPERRHGVKL
CCCCEEEECCCCCCCEEECCCCCCEEECCCCCEEEECCCHHHHHHHHCCCCCCHHCCEEE
RVRLVPTLAPLALARVLRDALSSSTLILSHPAPAVHIKTLDAQAVDLELSFHVAELGASS
EEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEEEEEEEHHHHHCCCC
AAKDEMFDLVYRHAKAAGLHLAAPAGAGGDSVPRSEVSQRPLSLRLLDSVALFSSLSEEE
CHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHH
KAALADAMEQRAYRKDEVVAREGEVLSVLMIVRSGILGLTRSADAPGAEIHRLAPGDLIG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHCCCCCCCCCCCEEECCCCCCCC
EEGVLLGEGEAGTVRALTYVVAFAIAKEALAPLLKDRPGLADELGALLAQRRETAHLEAA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
APCDREWGRSRLAEGIRAFMQVHRGRG
CCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA