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The map label for this gene is yqhC [C]

Identifier: 158423251

GI number: 158423251

Start: 1858669

End: 1859580

Strand: Direct

Name: yqhC [C]

Synonym: AZC_1627

Alternate gene names: 158423251

Gene position: 1858669-1859580 (Clockwise)

Preceding gene: 158423240

Following gene: 158423253

Centisome position: 34.61

GC content: 66.67

Gene sequence:

>912_bases
TTGCTTTGCCGGTATGCTCGGGAGATGGCCGGGATGTTCAAACCCCGCATGACATCGTCGCGTGAGGGCATCACGGTTCT
GGAGGATCTGCGCTGGCGGCGGTGGAATGGTGCGGTGGCTGACGTGTGGCATGCCGCCTGCGAGGCCGGTGCGCACGGAT
ATTATGTGGCCAAGGATCCGCGCCTCTTTGTCGTGCTGGAGCGCTCCGGCGGTGGGTCAGACCTGAAGCTCAGCCCCGGC
GCCAACGAGGTGGTGGCGAGCCGCGCCGAGCATCACCTGACCTTCGTCCCCGCCGGCATGCCGCTCTGGTCGCGCATCGA
CGCGCCCATGACCATCCGGCATCTGGATATCCACTTCGACGTGGACACGCTGTCCTCGCGCATCGGCGAGGAACTGGATG
CGGACCGCCTCTCAACGCCCCGTCTCAGGTTTACGGATGCGCGGATGATGAGCCTTGCCCGTCTCATCGCGGCCGAATGC
ATGGATGGGGACGGGCACCACGATCTCTACGGCGACGGGCTCATCGTGGCCCTGTTCATCGATCTGATGCAGCTTGCCCG
CGTGCCGGAGCGCAAGCGCGGGGCGCTGGCGCCGTGGCAGTTGCGCCGCGTCACCGATTTCATCGAGGCCAACTGCCTGC
GCAACATCCGCCTTCAGGAACTGGCGGAGCTCGCCGAACTCTCGCAATCCTATTTCAGCCACGCCTTCAAGGCGGCGACC
GGCCTTGCGCCCTATCAGTGGCACACCCAGGCGCGGCTGAAGCGCGTGCAGCAGATGCTTGCGGGCGACATGCCGCTGAC
CGACATTGCGGCAGCGGCCGGCTTTGCCGATCAGGCGCACCTCACCCGTGTGTTCCGCCGCGCCTTCGGGCAGACGCCCG
GCGCGTGGCGCCGGGGTCTCAGAGCGAACTGA

Upstream 100 bases:

>100_bases
CATCCTGTTGCGCATAGAACTTTTTTGGTCTCCTGTCGCGGCATGAGACCCGTTGCGGCAGATCGCGATCGGAAGATTGT
AATTTCTATAAAATGCAGCG

Downstream 100 bases:

>100_bases
TGGCGTTTACGCGGCCTTCAGCGGCACGCCGAGCCGGCCGGCCAGATCCTGCACGAACTGCCACGCCGTGCGGCCGGAGC
GGGCGCCGCGCGTGGTGGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator Protein; Transcriptional Regulatory Protein

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLCRYAREMAGMFKPRMTSSREGITVLEDLRWRRWNGAVADVWHAACEAGAHGYYVAKDPRLFVVLERSGGGSDLKLSPG
ANEVVASRAEHHLTFVPAGMPLWSRIDAPMTIRHLDIHFDVDTLSSRIGEELDADRLSTPRLRFTDARMMSLARLIAAEC
MDGDGHHDLYGDGLIVALFIDLMQLARVPERKRGALAPWQLRRVTDFIEANCLRNIRLQELAELAELSQSYFSHAFKAAT
GLAPYQWHTQARLKRVQQMLAGDMPLTDIAAAAGFADQAHLTRVFRRAFGQTPGAWRRGLRAN

Sequences:

>Translated_303_residues
MLCRYAREMAGMFKPRMTSSREGITVLEDLRWRRWNGAVADVWHAACEAGAHGYYVAKDPRLFVVLERSGGGSDLKLSPG
ANEVVASRAEHHLTFVPAGMPLWSRIDAPMTIRHLDIHFDVDTLSSRIGEELDADRLSTPRLRFTDARMMSLARLIAAEC
MDGDGHHDLYGDGLIVALFIDLMQLARVPERKRGALAPWQLRRVTDFIEANCLRNIRLQELAELAELSQSYFSHAFKAAT
GLAPYQWHTQARLKRVQQMLAGDMPLTDIAAAAGFADQAHLTRVFRRAFGQTPGAWRRGLRAN
>Mature_303_residues
MLCRYAREMAGMFKPRMTSSREGITVLEDLRWRRWNGAVADVWHAACEAGAHGYYVAKDPRLFVVLERSGGGSDLKLSPG
ANEVVASRAEHHLTFVPAGMPLWSRIDAPMTIRHLDIHFDVDTLSSRIGEELDADRLSTPRLRFTDARMMSLARLIAAEC
MDGDGHHDLYGDGLIVALFIDLMQLARVPERKRGALAPWQLRRVTDFIEANCLRNIRLQELAELAELSQSYFSHAFKAAT
GLAPYQWHTQARLKRVQQMLAGDMPLTDIAAAAGFADQAHLTRVFRRAFGQTPGAWRRGLRAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34024; Mature: 34024

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCRYAREMAGMFKPRMTSSREGITVLEDLRWRRWNGAVADVWHAACEAGAHGYYVAKDP
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCC
RLFVVLERSGGGSDLKLSPGANEVVASRAEHHLTFVPAGMPLWSRIDAPMTIRHLDIHFD
EEEEEEECCCCCCCEEECCCCHHHHHHHHHHCEEEEECCCCHHHHCCCCEEEEEEEEEEC
VDTLSSRIGEELDADRLSTPRLRFTDARMMSLARLIAAECMDGDGHHDLYGDGLIVALFI
HHHHHHHHHHHHCHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
DLMQLARVPERKRGALAPWQLRRVTDFIEANCLRNIRLQELAELAELSQSYFSHAFKAAT
HHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GLAPYQWHTQARLKRVQQMLAGDMPLTDIAAAAGFADQAHLTRVFRRAFGQTPGAWRRGL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCCC
RAN
CCC
>Mature Secondary Structure
MLCRYAREMAGMFKPRMTSSREGITVLEDLRWRRWNGAVADVWHAACEAGAHGYYVAKDP
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCC
RLFVVLERSGGGSDLKLSPGANEVVASRAEHHLTFVPAGMPLWSRIDAPMTIRHLDIHFD
EEEEEEECCCCCCCEEECCCCHHHHHHHHHHCEEEEECCCCHHHHCCCCEEEEEEEEEEC
VDTLSSRIGEELDADRLSTPRLRFTDARMMSLARLIAAECMDGDGHHDLYGDGLIVALFI
HHHHHHHHHHHHCHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
DLMQLARVPERKRGALAPWQLRRVTDFIEANCLRNIRLQELAELAELSQSYFSHAFKAAT
HHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GLAPYQWHTQARLKRVQQMLAGDMPLTDIAAAAGFADQAHLTRVFRRAFGQTPGAWRRGL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCCC
RAN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA