| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is lon
Identifier: 158423234
GI number: 158423234
Start: 1837639
End: 1840209
Strand: Direct
Name: lon
Synonym: AZC_1610
Alternate gene names: 158423234
Gene position: 1837639-1840209 (Clockwise)
Preceding gene: 158423233
Following gene: 158423235
Centisome position: 34.22
GC content: 65.19
Gene sequence:
>2571_bases TTGGTCAACACTCCGGTTCCCGGGCTCGGTTCCTGTGCCTCTCGCGGCCTTATCGCCGCTCCAGCATCGATCATCCGCTC CCGTCCCGGCTGCGACCACGCAGGCGAATGCATTGTCGTCTGCGTTGGCGTCTTTAGAAAGGATTGGGTCATGACGAGCC CCAAGCAGCGCCCGCCTCTCGTTCCCGGCGTCGCACAGACCTTCCCGGTGCTCCCCCTGCGGGACATCGTGGTTTTCCCG CACATGATCGTTCCCCTCTTCGTCGGCCGCGAGAAGTCCATCCGCGCGCTGGAAGAAGTGATGCGGGGCGATACCTACAT TCTTCTCGCCACCCAGGAAAACGCCTCGGACGATGATCCGGCCACCGATGCCATCTATCGCGTCGGCACGCTGGCGACCG TCCTCCAGCTCCTGAAGCTGCCCGACGGCACCGTGAAGGTGCTGGTGGAAGGCGTCACCCGCGCCCAGGTGGTGCAGTAC ACGGACCGTGCCGATCTCTATGAGGCCGAGGCCATCTCCCTGCCCGACGAGGTGGGCGATGTGGTCGAGGCCGAGGCGCT CGCGCGCTCGGTGGTCAACGAGTTCGAAAACTATGTGAAGCTCAACAAGAAGGTGTCTCCCGAGGTGGTCGGCGTCGTCG GCCAGATCGAGGATCACGCCAAGCTTGCCGACACCATCGCCTCCCATCTCGCGGTGAAGATCCCCGAGAAGCAGGCCGTG CTGGAGACCGTGAAGGTCGCCGACCGGCTGGAGAAGGTGCTCGGGCTGATGGAGAGCGAGATCTCCGTGCTCCAGGTGGA GAAGCGCATCCGCACGCGGGTGAAGCGCCAGATGGAGAAGACCCAGCGCGAGTACTATCTCAACGAGCAGATGAAGGCGA TCCAGAAGGAGCTCGGCGACGAGGACGGCCGCGACGACCTTCAGGAGCTGGAAGACCGCATCAAGCGCACCAAGCTGACC AAGGAGGCGCGCGAGAAGGCCACGCACGAGCTGAAGAAGCTCCGTCAGATGTCGCCCATGTCGGCGGAAGCCACCGTCGT GCGCAACTATCTGGACTGGCTGCTGTCGATCCCGTGGGGCATCAAGAGCAAGGTCAAGAAGGACCTGCCCTTCGCCCAGT CGGTGCTCGATTCCGACCACTACGGCCTCGACAAGGTCAAGGAACGCATCGTCGAGTATCTCGCCGTGCAGAGCCGCGCC AACAAGCTGGCCGGCCCGATCCTGTGCCTCGTCGGCCCTCCCGGCGTCGGCAAGACCTCGCTCGGCCGCTCCATCGCCAA GGCGACGGGCCGCGAGTTCGTGCGCGTCTCCCTCGGCGGCGTGCGCGACGAGGCGGAGATCCGTGGTCACCGGCGGACCT ACATCGGGTCCATGCCCGGCAAGATCATCCAGTCCATGCGCAAGGCCAAGAAGTCGAACCCGCTCTTCCTGCTGGACGAG ATCGACAAGATGGGCGCGGACTTCCGCGGCGATCCGTCGGCGGCCCTGCTGGAGGTTCTGGACCCCGAGCAGAACCCGAC GTTCAACGATCACTATCTGGAGGTCGATTATGACCTCTCGAACGTGATGTTCGTGACCACGGCGAACACGCTGAACATTC CGCCGGCCCTTCTGGACCGTATGGAAGTGATCCGCATCGCCGGCTACACCGAGGACGAGAAGGCGGAGATCTCGCGCAAG CACCTGATCCCCAACGCGCTTCAGAAGCACGGCCTCTCGGCCAAGGAATGGTCCATTGATGACGCGGCTCTGCTGCAGGT CATCCGGCGCTACACCCGCGAGGCGGGCGTGCGTAACCTCGAACGCGAGATTTCCACCCTCGCCCGCAAGGCGGTGAAGG AACTCGTCATCTCCAAGAAGAAGTCGGTGAAGGTCACCGCCAAGAATCTGGAGACCTTCCTCGGGGTGCCGCGCTTCCGC TATGGCGAGATCGAGCGGGAAGACCAGGTGGGCGTCGTCACGGGCCTTGCCTGGACCGAGGTGGGCGGCGAGCTGCTGAC CATCGAAGGCGTCATGATGCCCGGCAAGGGCCGCATGACGGTGACCGGCAACCTGAAGGAAGTGATGAAGGAGTCCATCT CCGCCGCCGCCTCCTACGTGCGGTCGCGTTCGGTGGACTTCGGCATCGAGCCGCCGCTGTTCGAGCGTCGGGACATCCAC GTCCACGTGCCCGAAGGCGCGACCCCGAAGGACGGCCCGTCCGCCGGCGTCGCCATGGCCACCACCATCGTCTCCGTGCT CACGGGCATTCCCGTGCGCCGTGACGTGGCGATGACCGGCGAGATCACGCTGCGCGGCCGCGTGCTGCCCATCGGCGGCC TCAAGGAGAAGCTGCTGGCCGCCCTGCGCGGCGGCATCAAGAAGGTGCTGATCCCCGAGGAGAACGCCAAGGATCTGGCG GACATCCCGGACAATGTGAAGAACGCGCTGGAGATCATTCCCGTGTCGCGCATGGACGAGGTGCTCCACCACGCCCTCCT GCGGCACCCCGAGCCGATCTCCTGGACCGAGCAGCCGGTGAGCGGCGCGGTCGTTCCGGACGAGGATGCGGCGGGCGTCG TCGCCCACTGA
Upstream 100 bases:
>100_bases CGGGGGAAACGCCAGAACCTGCCTGTTTCATGAATGTTTCACGTGCGGTGTCGGGAGCCTTCCCAACGGTCTTGAAAGCC AGCGGGGCGCTCTCCATGTC
Downstream 100 bases:
>100_bases GTCGTCGCCCATCGCGGTTGGAAGTGGCCCGGAATCACGATTCCGGGCCATTTTTCTTTGTGTGGATGCCGCCTGCGACG CCGCCGGCCGTGCCTTTGCT
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MVNTPVPGLGSCASRGLIAAPASIIRSRPGCDHAGECIVVCVGVFRKDWVMTSPKQRPPLVPGVAQTFPVLPLRDIVVFP HMIVPLFVGREKSIRALEEVMRGDTYILLATQENASDDDPATDAIYRVGTLATVLQLLKLPDGTVKVLVEGVTRAQVVQY TDRADLYEAEAISLPDEVGDVVEAEALARSVVNEFENYVKLNKKVSPEVVGVVGQIEDHAKLADTIASHLAVKIPEKQAV LETVKVADRLEKVLGLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQMKAIQKELGDEDGRDDLQELEDRIKRTKLT KEAREKATHELKKLRQMSPMSAEATVVRNYLDWLLSIPWGIKSKVKKDLPFAQSVLDSDHYGLDKVKERIVEYLAVQSRA NKLAGPILCLVGPPGVGKTSLGRSIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKKSNPLFLLDE IDKMGADFRGDPSAALLEVLDPEQNPTFNDHYLEVDYDLSNVMFVTTANTLNIPPALLDRMEVIRIAGYTEDEKAEISRK HLIPNALQKHGLSAKEWSIDDAALLQVIRRYTREAGVRNLEREISTLARKAVKELVISKKKSVKVTAKNLETFLGVPRFR YGEIEREDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISAAASYVRSRSVDFGIEPPLFERRDIH VHVPEGATPKDGPSAGVAMATTIVSVLTGIPVRRDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLA DIPDNVKNALEIIPVSRMDEVLHHALLRHPEPISWTEQPVSGAVVPDEDAAGVVAH
Sequences:
>Translated_856_residues MVNTPVPGLGSCASRGLIAAPASIIRSRPGCDHAGECIVVCVGVFRKDWVMTSPKQRPPLVPGVAQTFPVLPLRDIVVFP HMIVPLFVGREKSIRALEEVMRGDTYILLATQENASDDDPATDAIYRVGTLATVLQLLKLPDGTVKVLVEGVTRAQVVQY TDRADLYEAEAISLPDEVGDVVEAEALARSVVNEFENYVKLNKKVSPEVVGVVGQIEDHAKLADTIASHLAVKIPEKQAV LETVKVADRLEKVLGLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQMKAIQKELGDEDGRDDLQELEDRIKRTKLT KEAREKATHELKKLRQMSPMSAEATVVRNYLDWLLSIPWGIKSKVKKDLPFAQSVLDSDHYGLDKVKERIVEYLAVQSRA NKLAGPILCLVGPPGVGKTSLGRSIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKKSNPLFLLDE IDKMGADFRGDPSAALLEVLDPEQNPTFNDHYLEVDYDLSNVMFVTTANTLNIPPALLDRMEVIRIAGYTEDEKAEISRK HLIPNALQKHGLSAKEWSIDDAALLQVIRRYTREAGVRNLEREISTLARKAVKELVISKKKSVKVTAKNLETFLGVPRFR YGEIEREDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISAAASYVRSRSVDFGIEPPLFERRDIH VHVPEGATPKDGPSAGVAMATTIVSVLTGIPVRRDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLA DIPDNVKNALEIIPVSRMDEVLHHALLRHPEPISWTEQPVSGAVVPDEDAAGVVAH >Mature_856_residues MVNTPVPGLGSCASRGLIAAPASIIRSRPGCDHAGECIVVCVGVFRKDWVMTSPKQRPPLVPGVAQTFPVLPLRDIVVFP HMIVPLFVGREKSIRALEEVMRGDTYILLATQENASDDDPATDAIYRVGTLATVLQLLKLPDGTVKVLVEGVTRAQVVQY TDRADLYEAEAISLPDEVGDVVEAEALARSVVNEFENYVKLNKKVSPEVVGVVGQIEDHAKLADTIASHLAVKIPEKQAV LETVKVADRLEKVLGLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQMKAIQKELGDEDGRDDLQELEDRIKRTKLT KEAREKATHELKKLRQMSPMSAEATVVRNYLDWLLSIPWGIKSKVKKDLPFAQSVLDSDHYGLDKVKERIVEYLAVQSRA NKLAGPILCLVGPPGVGKTSLGRSIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKKSNPLFLLDE IDKMGADFRGDPSAALLEVLDPEQNPTFNDHYLEVDYDLSNVMFVTTANTLNIPPALLDRMEVIRIAGYTEDEKAEISRK HLIPNALQKHGLSAKEWSIDDAALLQVIRRYTREAGVRNLEREISTLARKAVKELVISKKKSVKVTAKNLETFLGVPRFR YGEIEREDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISAAASYVRSRSVDFGIEPPLFERRDIH VHVPEGATPKDGPSAGVAMATTIVSVLTGIPVRRDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLA DIPDNVKNALEIIPVSRMDEVLHHALLRHPEPISWTEQPVSGAVVPDEDAAGVVAH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain
Homologues:
Organism=Homo sapiens, GI21396489, Length=838, Percent_Identity=38.3054892601432, Blast_Score=526, Evalue=1e-149, Organism=Homo sapiens, GI31377667, Length=774, Percent_Identity=38.6304909560724, Blast_Score=523, Evalue=1e-148, Organism=Escherichia coli, GI1786643, Length=765, Percent_Identity=63.7908496732026, Blast_Score=988, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=693, Percent_Identity=39.8268398268398, Blast_Score=506, Evalue=1e-143, Organism=Caenorhabditis elegans, GI17556486, Length=803, Percent_Identity=33.0012453300125, Blast_Score=441, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6319449, Length=711, Percent_Identity=40.5063291139241, Blast_Score=507, Evalue=1e-144, Organism=Drosophila melanogaster, GI221513036, Length=650, Percent_Identity=42.7692307692308, Blast_Score=509, Evalue=1e-144, Organism=Drosophila melanogaster, GI24666867, Length=650, Percent_Identity=42.7692307692308, Blast_Score=509, Evalue=1e-144,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): LON_AZOC5 (A8HYF7)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001524526.1 - ProteinModelPortal: A8HYF7 - MEROPS: S16.001 - GeneID: 5692431 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_1610 - HOGENOM: HBG566281 - OMA: HTFQDHY - ProtClustDB: CLSK2392593 - BioCyc: ACAU438753:AZC_1610-MONOMER - GO: GO:0005737 - GO: GO:0006508 - InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 - PRINTS: PR00830 - SMART: SM00382 - SMART: SM00464 - TIGRFAMs: TIGR00763
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C; SSF88697 PUA-like; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =3.4.21.53
Molecular weight: Translated: 94405; Mature: 94405
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS01046 LON_SER
Important sites: ACT_SITE 734-734 ACT_SITE 777-777
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNTPVPGLGSCASRGLIAAPASIIRSRPGCDHAGECIVVCVGVFRKDWVMTSPKQRPPL CCCCCCCCCCHHHCCCCHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC VPGVAQTFPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMRGDTYILLATQENASDDDP CCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCC ATDAIYRVGTLATVLQLLKLPDGTVKVLVEGVTRAQVVQYTDRADLYEAEAISLPDEVGD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHH VVEAEALARSVVNEFENYVKLNKKVSPEVVGVVGQIEDHAKLADTIASHLAVKIPEKQAV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHH LETVKVADRLEKVLGLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQMKAIQKELGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDGRDDLQELEDRIKRTKLTKEAREKATHELKKLRQMSPMSAEATVVRNYLDWLLSIPWG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC IKSKVKKDLPFAQSVLDSDHYGLDKVKERIVEYLAVQSRANKLAGPILCLVGPPGVGKTS HHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH LGRSIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKKSNPLFLLDE HHHHHHHHHHHHEEEECCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEEC IDKMGADFRGDPSAALLEVLDPEQNPTFNDHYLEVDYDLSNVMFVTTANTLNIPPALLDR HHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHH MEVIRIAGYTEDEKAEISRKHLIPNALQKHGLSAKEWSIDDAALLQVIRRYTREAGVRNL HHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EREISTLARKAVKELVISKKKSVKVTAKNLETFLGVPRFRYGEIEREDQVGVVTGLAWTE HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHH VGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISAAASYVRSRSVDFGIEPPLFERRDIH CCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE VHVPEGATPKDGPSAGVAMATTIVSVLTGIPVRRDVAMTGEITLRGRVLPIGGLKEKLLA EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEEECCCHHHHHHH ALRGGIKKVLIPEENAKDLADIPDNVKNALEIIPVSRMDEVLHHALLRHPEPISWTEQPV HHHCCCEEEECCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC SGAVVPDEDAAGVVAH CCCCCCCCCCCCCCCC >Mature Secondary Structure MVNTPVPGLGSCASRGLIAAPASIIRSRPGCDHAGECIVVCVGVFRKDWVMTSPKQRPPL CCCCCCCCCCHHHCCCCHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC VPGVAQTFPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMRGDTYILLATQENASDDDP CCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCC ATDAIYRVGTLATVLQLLKLPDGTVKVLVEGVTRAQVVQYTDRADLYEAEAISLPDEVGD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHH VVEAEALARSVVNEFENYVKLNKKVSPEVVGVVGQIEDHAKLADTIASHLAVKIPEKQAV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHH LETVKVADRLEKVLGLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQMKAIQKELGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDGRDDLQELEDRIKRTKLTKEAREKATHELKKLRQMSPMSAEATVVRNYLDWLLSIPWG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC IKSKVKKDLPFAQSVLDSDHYGLDKVKERIVEYLAVQSRANKLAGPILCLVGPPGVGKTS HHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH LGRSIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKKSNPLFLLDE HHHHHHHHHHHHEEEECCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEEC IDKMGADFRGDPSAALLEVLDPEQNPTFNDHYLEVDYDLSNVMFVTTANTLNIPPALLDR HHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHH MEVIRIAGYTEDEKAEISRKHLIPNALQKHGLSAKEWSIDDAALLQVIRRYTREAGVRNL HHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EREISTLARKAVKELVISKKKSVKVTAKNLETFLGVPRFRYGEIEREDQVGVVTGLAWTE HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHH VGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISAAASYVRSRSVDFGIEPPLFERRDIH CCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE VHVPEGATPKDGPSAGVAMATTIVSVLTGIPVRRDVAMTGEITLRGRVLPIGGLKEKLLA EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEEECCCHHHHHHH ALRGGIKKVLIPEENAKDLADIPDNVKNALEIIPVSRMDEVLHHALLRHPEPISWTEQPV HHHCCCEEEECCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC SGAVVPDEDAAGVVAH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA