| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is bztC [H]
Identifier: 158423211
GI number: 158423211
Start: 1811415
End: 1812815
Strand: Direct
Name: bztC [H]
Synonym: AZC_1587
Alternate gene names: 158423211
Gene position: 1811415-1812815 (Clockwise)
Preceding gene: 158423210
Following gene: 158423212
Centisome position: 33.73
GC content: 67.74
Gene sequence:
>1401_bases ATGGATGCCAATGCTCCCGCTTCCGCGCCGGTTTCCGGCTTCGTCGCCCCGGCCATGAAGGCCCCCGAGCCGCCGCCGGT TTCCGCCCGCGGCCCGGTCGCCTGGGTGCGCGCGCACCTGCTCGGCTCGCCGCTCCAGATCCTGCTCACGCTCTTCGGCC TGTGGGTGGTGTGGCTGGCGGTGCCCCCGCTCATCCGCTTCTTCCTCATCGACGCGGTCTATACGGGCGACAACCGCAAC GCCTGCCTGCCCGATGTGGTGGGCCGGCCGGTGGGGGCCTGCTGGCCCTTCATCGCCGCCAAGTGGAACCAGATCGTCTA TGGCTTCTATCCGGAAGCCGAGCGCTGGCGGGTGAACGTCGTCTATGCGCTGGCGGTCATCCTGCTGGTGCCGCTGCTGC TGCAGAAGGTGCCCTACAAGCGGCTGAACGCGCTGCTGTTCTTCGGCGTCTTCCCGGTGGTGGCCTTCGTGTTGCTCACC GGCGGCCACCTGTCGCTGAACAGCTTCATCCTGAGCTGGATCGGCCTCGGCGGCGTGTTCACCGCCATCGGCAAGGCCGT CGGCCTGCCCAGCGGTTTCTGGCCCGACTATGTGGTCTCGGCGCTGCTGGTTTCGGCCATCGTCGGTGCGGTCGCGCCGC TGCTTGCGGGCTCGCGCCGCTCCGCCTTCCGGGCCACGCTCGTGGTCTTCGCGGTGCTCGGCGTGGTGCTGGCGGCGGTC AACATCAACTTCGGCCTCGAATGGGTGGAGACCCGCCAGTGGGGCGGCATGATGGTGACCCTGGTGATCGCGGTCACCGG CATCATCGCTTCCCTGCCGCTCGGCATCCTGCTTGCCTTGGGCCGGCGCTCGAAGATGCCGCTGATGCACATCGCGTCCA CGCTCTTCATCGAGTTCTGGCGCGGCGTGCCGCTGGTGACGGTGCTGTTCTTCGCCACCTACATGCTGCCGCTGTTCCTG CCCGGCCGCTTCACCATCGACGGGCTGCTGCGCGCGCTGGTGGGCGTCGCGCTCTTTGCGTCCGCCTATATGGCGGAGGT GGTGCGCGGCGGCCTTCAGGCGATCCCCAAGGGCCAGTATGAGGGCGCCATGGCGCTCGGCCTGCCGGGCACGCTGATGA TGCGCCTCGTGGTGCTGCCGCAGGCGCTGAAGCTGGTCATCCCCGGCATCGTCAACACCTTCATCGCGCTGTTCAAGGAC ACGACGCTGGTGCTGATCGTCTCGATCTTCGACCTGCTCGGCGTGCTGCGCGCGGCCTTCACCGATCCGTCCTGGGCGAC GCCCACGACCCTCTACACGGGCTTCGGCTTTGCCGGCCTGTTCTACTTCATCTTCTGCTTCGGCATGTCCCGTTACTCGC TGGCGCTGGAGAAGCGCCTCGACCGCAACCATCGTCATTGA
Upstream 100 bases:
>100_bases CACCATGGCCGTCTATCTGACGATCTCGGTGGTCACGACGCTGATCATGGACTGGTACAACCGGCGCGTTGCGCTGATTG AACGCTGAGGAGCCACGGTC
Downstream 100 bases:
>100_bases GGCCAGACCCCATGAGCGCTGATCCCATCATCGCCGCCACCGAGGCCAAGGCACCCGCCATCGCCATCGAACTCGTCAAT GTCAGCAAGTGGTATGGCCA
Product: amino acid ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MDANAPASAPVSGFVAPAMKAPEPPPVSARGPVAWVRAHLLGSPLQILLTLFGLWVVWLAVPPLIRFFLIDAVYTGDNRN ACLPDVVGRPVGACWPFIAAKWNQIVYGFYPEAERWRVNVVYALAVILLVPLLLQKVPYKRLNALLFFGVFPVVAFVLLT GGHLSLNSFILSWIGLGGVFTAIGKAVGLPSGFWPDYVVSALLVSAIVGAVAPLLAGSRRSAFRATLVVFAVLGVVLAAV NINFGLEWVETRQWGGMMVTLVIAVTGIIASLPLGILLALGRRSKMPLMHIASTLFIEFWRGVPLVTVLFFATYMLPLFL PGRFTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMALGLPGTLMMRLVVLPQALKLVIPGIVNTFIALFKD TTLVLIVSIFDLLGVLRAAFTDPSWATPTTLYTGFGFAGLFYFIFCFGMSRYSLALEKRLDRNHRH
Sequences:
>Translated_466_residues MDANAPASAPVSGFVAPAMKAPEPPPVSARGPVAWVRAHLLGSPLQILLTLFGLWVVWLAVPPLIRFFLIDAVYTGDNRN ACLPDVVGRPVGACWPFIAAKWNQIVYGFYPEAERWRVNVVYALAVILLVPLLLQKVPYKRLNALLFFGVFPVVAFVLLT GGHLSLNSFILSWIGLGGVFTAIGKAVGLPSGFWPDYVVSALLVSAIVGAVAPLLAGSRRSAFRATLVVFAVLGVVLAAV NINFGLEWVETRQWGGMMVTLVIAVTGIIASLPLGILLALGRRSKMPLMHIASTLFIEFWRGVPLVTVLFFATYMLPLFL PGRFTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMALGLPGTLMMRLVVLPQALKLVIPGIVNTFIALFKD TTLVLIVSIFDLLGVLRAAFTDPSWATPTTLYTGFGFAGLFYFIFCFGMSRYSLALEKRLDRNHRH >Mature_466_residues MDANAPASAPVSGFVAPAMKAPEPPPVSARGPVAWVRAHLLGSPLQILLTLFGLWVVWLAVPPLIRFFLIDAVYTGDNRN ACLPDVVGRPVGACWPFIAAKWNQIVYGFYPEAERWRVNVVYALAVILLVPLLLQKVPYKRLNALLFFGVFPVVAFVLLT GGHLSLNSFILSWIGLGGVFTAIGKAVGLPSGFWPDYVVSALLVSAIVGAVAPLLAGSRRSAFRATLVVFAVLGVVLAAV NINFGLEWVETRQWGGMMVTLVIAVTGIIASLPLGILLALGRRSKMPLMHIASTLFIEFWRGVPLVTVLFFATYMLPLFL PGRFTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMALGLPGTLMMRLVVLPQALKLVIPGIVNTFIALFKD TTLVLIVSIFDLLGVLRAAFTDPSWATPTTLYTGFGFAGLFYFIFCFGMSRYSLALEKRLDRNHRH
Specific function: Part of a binding-protein-dependent transport system for glutamate, glutamine, aspartate and asparagine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082239, Length=218, Percent_Identity=62.8440366972477, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=32.5358851674641, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=30.952380952381, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1788645, Length=222, Percent_Identity=29.2792792792793, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787030, Length=157, Percent_Identity=33.1210191082803, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786874, Length=169, Percent_Identity=25.4437869822485, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=28.4444444444444, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI48994930, Length=82, Percent_Identity=34.1463414634146, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1788646, Length=215, Percent_Identity=26.046511627907, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 50485; Mature: 50485
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDANAPASAPVSGFVAPAMKAPEPPPVSARGPVAWVRAHLLGSPLQILLTLFGLWVVWLA CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH VPPLIRFFLIDAVYTGDNRNACLPDVVGRPVGACWPFIAAKWNQIVYGFYPEAERWRVNV HHHHHHHHHHHHHEECCCCCCCCHHHHCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHH VYALAVILLVPLLLQKVPYKRLNALLFFGVFPVVAFVLLTGGHLSLNSFILSWIGLGGVF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TAIGKAVGLPSGFWPDYVVSALLVSAIVGAVAPLLAGSRRSAFRATLVVFAVLGVVLAAV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NINFGLEWVETRQWGGMMVTLVIAVTGIIASLPLGILLALGRRSKMPLMHIASTLFIEFW HHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RGVPLVTVLFFATYMLPLFLPGRFTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQY CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGAMALGLPGTLMMRLVVLPQALKLVIPGIVNTFIALFKDTTLVLIVSIFDLLGVLRAAF CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH TDPSWATPTTLYTGFGFAGLFYFIFCFGMSRYSLALEKRLDRNHRH CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDANAPASAPVSGFVAPAMKAPEPPPVSARGPVAWVRAHLLGSPLQILLTLFGLWVVWLA CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH VPPLIRFFLIDAVYTGDNRNACLPDVVGRPVGACWPFIAAKWNQIVYGFYPEAERWRVNV HHHHHHHHHHHHHEECCCCCCCCHHHHCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHH VYALAVILLVPLLLQKVPYKRLNALLFFGVFPVVAFVLLTGGHLSLNSFILSWIGLGGVF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TAIGKAVGLPSGFWPDYVVSALLVSAIVGAVAPLLAGSRRSAFRATLVVFAVLGVVLAAV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NINFGLEWVETRQWGGMMVTLVIAVTGIIASLPLGILLALGRRSKMPLMHIASTLFIEFW HHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RGVPLVTVLFFATYMLPLFLPGRFTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQY CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGAMALGLPGTLMMRLVVLPQALKLVIPGIVNTFIALFKDTTLVLIVSIFDLLGVLRAAF CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH TDPSWATPTTLYTGFGFAGLFYFIFCFGMSRYSLALEKRLDRNHRH CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8809753 [H]