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The map label for this gene is yhdX [H]

Identifier: 158423210

GI number: 158423210

Start: 1810113

End: 1811402

Strand: Direct

Name: yhdX [H]

Synonym: AZC_1586

Alternate gene names: 158423210

Gene position: 1810113-1811402 (Clockwise)

Preceding gene: 158423209

Following gene: 158423211

Centisome position: 33.71

GC content: 65.97

Gene sequence:

>1290_bases
ATGACAGACGCTAGCCTGCGTGGGGGGGAGCCCACCCGTCGCTGGTCGTGGACCGATCCCAAGGTCCGATCCCTGGTTCT
GCAGGTGCTGCTCGGCCTGTTCCTGATCTGGATGGCCTGGTCGATCATCGCCAATGCGCAAGCCAACCTTGCCCGCCAGG
GCATCGCTTCCGGATTCGGCTTCCTCGACAATTCCGCCGGCTTCGGCATCACGCAGACGCTGATCCCCTATGGGGAAAGC
GACAGCTACGGCCGCGCCTTCCTGGTGGGCCTGCTCAACACGCTGCTGGTGGCTGTCCTCGGAATCATCCTCTCCACGAT
CATCGGCTTCCTGATGGGCGTGGCGCGTCTGTCCAACAACGTCGTCATCAAGGGGCTCTCCACCGCTTATGTGGAGATCA
CCCGCAACCTGCCCCCGCTGTTCCAGATCATGTTCTGGTACATCGCCGTGCTCGCTGCCCTGCCGGGGCCGCGCCAGAGC
ATCGGCTTCGGCCTCCAGCCGCTGCTGAACGTGCTCGGTGACGGCCTGAACGCGGTGGGCCTTGCCTCCGTGGGGACCAG
CCTCAAGGCGCTCGCCGGCGGCGTGAGCGCGCCCGGCGTGTTCCTCAACAACCGCGGCCTCGTCATCCCGCGCGCCATCT
TCGGCGAGGGGGCGCAGTTCGTGTTCTGGGCCTTCGTGGTCGCGCTCGTGCTGGTGTTCGTGCTCGGCCGCTGGGCCAAG
CGCCGTCGCGAGGCGACGGGGCAGCAGTTCCCGGTCTTCTGGACCTCGCTTGCGCTTCTCATCGGCCTGCCGTTCCTCAC
CGGCGCGGCGCTGGGCTTTCCGGTGACGTTCGAGAAGCCCGAGCTGCGCGGCTTCAACTTCGCCGGCGGCGTTCGCGTCA
TTCCCGAACTCGTCTCGCTGCTCCTGGCCCTGTCCATCTACACCGCCGGCTTCATCGCCGAGACGGTGCGCAGCGGCATC
CTCGCGGTGTCGAAGGGGCAGACAGAAGCGGCCCACTCGCTGGGCCTCAAGGGCGGGCTGACCATGCGCCTCGTGGTCAT
TCCGCAGGCCATGCGCGTCATCATCCCCCAGCTGACCAGCCAGTATCTGAACCTGACCAAGAACTCGACGCTGGGCGTCG
CGGTGGGCTACCCGGACCTCTTCTCCGTGTTCGCCGGCACCACGCTGAACCAGACCGGCCAGGCCATCGAAATCATTGCC
ATCACCATGGCCGTCTATCTGACGATCTCGGTGGTCACGACGCTGATCATGGACTGGTACAACCGGCGCGTTGCGCTGAT
TGAACGCTGA

Upstream 100 bases:

>100_bases
AGCCCGCCCCCGGGAGGCCTGCCTCCGCGGGAGAGGGTTTGCAATCCAAAGACGGTCACGTGCCGAAGGCGCGGTCCGAT
CCACTTATTCGAGGGGTAAC

Downstream 100 bases:

>100_bases
GGAGCCACGGTCATGGATGCCAATGCTCCCGCTTCCGCGCCGGTTTCCGGCTTCGTCGCCCCGGCCATGAAGGCCCCCGA
GCCGCCGCCGGTTTCCGCCC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTDASLRGGEPTRRWSWTDPKVRSLVLQVLLGLFLIWMAWSIIANAQANLARQGIASGFGFLDNSAGFGITQTLIPYGES
DSYGRAFLVGLLNTLLVAVLGIILSTIIGFLMGVARLSNNVVIKGLSTAYVEITRNLPPLFQIMFWYIAVLAALPGPRQS
IGFGLQPLLNVLGDGLNAVGLASVGTSLKALAGGVSAPGVFLNNRGLVIPRAIFGEGAQFVFWAFVVALVLVFVLGRWAK
RRREATGQQFPVFWTSLALLIGLPFLTGAALGFPVTFEKPELRGFNFAGGVRVIPELVSLLLALSIYTAGFIAETVRSGI
LAVSKGQTEAAHSLGLKGGLTMRLVVIPQAMRVIIPQLTSQYLNLTKNSTLGVAVGYPDLFSVFAGTTLNQTGQAIEIIA
ITMAVYLTISVVTTLIMDWYNRRVALIER

Sequences:

>Translated_429_residues
MTDASLRGGEPTRRWSWTDPKVRSLVLQVLLGLFLIWMAWSIIANAQANLARQGIASGFGFLDNSAGFGITQTLIPYGES
DSYGRAFLVGLLNTLLVAVLGIILSTIIGFLMGVARLSNNVVIKGLSTAYVEITRNLPPLFQIMFWYIAVLAALPGPRQS
IGFGLQPLLNVLGDGLNAVGLASVGTSLKALAGGVSAPGVFLNNRGLVIPRAIFGEGAQFVFWAFVVALVLVFVLGRWAK
RRREATGQQFPVFWTSLALLIGLPFLTGAALGFPVTFEKPELRGFNFAGGVRVIPELVSLLLALSIYTAGFIAETVRSGI
LAVSKGQTEAAHSLGLKGGLTMRLVVIPQAMRVIIPQLTSQYLNLTKNSTLGVAVGYPDLFSVFAGTTLNQTGQAIEIIA
ITMAVYLTISVVTTLIMDWYNRRVALIER
>Mature_428_residues
TDASLRGGEPTRRWSWTDPKVRSLVLQVLLGLFLIWMAWSIIANAQANLARQGIASGFGFLDNSAGFGITQTLIPYGESD
SYGRAFLVGLLNTLLVAVLGIILSTIIGFLMGVARLSNNVVIKGLSTAYVEITRNLPPLFQIMFWYIAVLAALPGPRQSI
GFGLQPLLNVLGDGLNAVGLASVGTSLKALAGGVSAPGVFLNNRGLVIPRAIFGEGAQFVFWAFVVALVLVFVLGRWAKR
RREATGQQFPVFWTSLALLIGLPFLTGAALGFPVTFEKPELRGFNFAGGVRVIPELVSLLLALSIYTAGFIAETVRSGIL
AVSKGQTEAAHSLGLKGGLTMRLVVIPQAMRVIIPQLTSQYLNLTKNSTLGVAVGYPDLFSVFAGTTLNQTGQAIEIIAI
TMAVYLTISVVTTLIMDWYNRRVALIER

Specific function: Probably part of the binding-protein-dependent transport system ydhWXYZ for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4597

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI48994930, Length=418, Percent_Identity=49.0430622009569, Blast_Score=368, Evalue=1e-103,
Organism=Escherichia coli, GI1786873, Length=130, Percent_Identity=32.3076923076923, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786874, Length=131, Percent_Identity=36.6412213740458, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1788226, Length=143, Percent_Identity=30.0699300699301, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082239, Length=97, Percent_Identity=37.1134020618557, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 46030; Mature: 45899

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDASLRGGEPTRRWSWTDPKVRSLVLQVLLGLFLIWMAWSIIANAQANLARQGIASGFG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FLDNSAGFGITQTLIPYGESDSYGRAFLVGLLNTLLVAVLGIILSTIIGFLMGVARLSNN
CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VVIKGLSTAYVEITRNLPPLFQIMFWYIAVLAALPGPRQSIGFGLQPLLNVLGDGLNAVG
EEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCHHH
LASVGTSLKALAGGVSAPGVFLNNRGLVIPRAIFGEGAQFVFWAFVVALVLVFVLGRWAK
HHHHHHHHHHHHCCCCCCCEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RRREATGQQFPVFWTSLALLIGLPFLTGAALGFPVTFEKPELRGFNFAGGVRVIPELVSL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHH
LLALSIYTAGFIAETVRSGILAVSKGQTEAAHSLGLKGGLTMRLVVIPQAMRVIIPQLTS
HHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH
QYLNLTKNSTLGVAVGYPDLFSVFAGTTLNQTGQAIEIIAITMAVYLTISVVTTLIMDWY
HHHHHCCCCCCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NRRVALIER
CCEEEEECC
>Mature Secondary Structure 
TDASLRGGEPTRRWSWTDPKVRSLVLQVLLGLFLIWMAWSIIANAQANLARQGIASGFG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FLDNSAGFGITQTLIPYGESDSYGRAFLVGLLNTLLVAVLGIILSTIIGFLMGVARLSNN
CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VVIKGLSTAYVEITRNLPPLFQIMFWYIAVLAALPGPRQSIGFGLQPLLNVLGDGLNAVG
EEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCHHH
LASVGTSLKALAGGVSAPGVFLNNRGLVIPRAIFGEGAQFVFWAFVVALVLVFVLGRWAK
HHHHHHHHHHHHCCCCCCCEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RRREATGQQFPVFWTSLALLIGLPFLTGAALGFPVTFEKPELRGFNFAGGVRVIPELVSL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHH
LLALSIYTAGFIAETVRSGILAVSKGQTEAAHSLGLKGGLTMRLVVIPQAMRVIIPQLTS
HHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH
QYLNLTKNSTLGVAVGYPDLFSVFAGTTLNQTGQAIEIIAITMAVYLTISVVTTLIMDWY
HHHHHCCCCCCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NRRVALIER
CCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]