| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiB [H]
Identifier: 158423135
GI number: 158423135
Start: 1718713
End: 1720335
Strand: Direct
Name: gsiB [H]
Synonym: AZC_1511
Alternate gene names: 158423135
Gene position: 1718713-1720335 (Clockwise)
Preceding gene: 158423134
Following gene: 158423136
Centisome position: 32.01
GC content: 63.4
Gene sequence:
>1623_bases ATGAACCGCCGTGAGTTTCTCACCACCGCTTCCGCCACCGCCGCTGCTGCCGGCGCCGCCGTTTCCGCGCCCGCCGTCTT CTCTCCCGCCAAGGCGCAGGCGCGGTCCGAGACGCTGCTGATCGTCTCCGAGAGCGGGCCGAACAATCTGGACATCCACG GCGTCGGCACCAACGTGCCCGGCTATGAGGCGAGCTGGAACTGCTACGACCGCCTCATTACCCACCCCATGAAGGACGTG AACGGCACGCCCTATTACGACCGCGACAAGTTCGAGGGCGAACTGGCCGAGGACATGAGCATCGGCGACATGTCGGTGAC GTTCAAGCTGAAGAAGGACGCCACCTTCCAGGACGGCACGCCCGTCACCGCCAAGGATGTGAAGTGGTCGCTGGACCGCG CCGTCTCCGTCGGCGGCTTCCCCACCTTCCAGATGAAGGCGGGCTCGCTGGAGAAGCCCGAGCAGTTCGTGGTGGTGGAC GACCGCACCATCCGCGTCGACTTCATCCGCAAGGACCGTCTGACCATTCCCGATCTCGCTGTGATCGTGCCCTGCGTCAT CAATTCCGAGCTGGTGAAGAAGAACGCCACCGCGCAGGACCCCTGGGGCCTCGAATACACCAAGCAGAACACGGTGGGCT CCGGCGCCTATAAGGTGACCAAGTGGACGCCCGGCACGGAAGTGATCTTCGAGCGCTTCGACAATTGGAAGGGCGGCCCG CTGCCCAAGGTGAAGCGCGTGATCTGGCGCATGGTGCCATCTTCCGGCAACCGCCGCGCGCTCTTGGAGCGGGGCGATGC GGACATCTCCTACGATCTGCCGAACAAGGACTTCGCCGAGCTGAAGTCCAACCCCAAGCTCAACATCATCTCCACGCCCT ATTCCAACGGCGTGCAGTACATCGGCATGAACGTCACCAAGCCGCCCTTCAACAATCCGAAGGTGCGGCAGGCGGTGGCC TATGCGCTGCCCTATGAGAAGATCATGGAAGCGGTGCTGTTCGGCCTCGCCAACCCCATGTTTGGCGCGCCAGCGGACTA CCAGACCAAGGTCGCCTGGCCGCAGCCCACCAAATACAAGACCGACATCGCCAAGGCGAAGGCACTGCTGGCCGAGGCGG GCTATGCGGACGGCTTCGAGACCACGCTCTCCTTCGACCTCGGCTTCGCCGGCGTGAACGAGCCGCTGTGCGTGCTCGTG CAGGAGAGCCTCGCCCAGATCGGCATCAAGACCACCATCAACAAGATCCCTGGCGCCAACTGGCGCACCGAGCTGAACAA GAAGGAGCTGCCGCTCTTCACCAACGTCTTCTCGGGCTGGCTGGACTATCCCGAATACTTCTTCTTCTGGTGCTACCACG GCTCCAACTCGGTCTTTAACACCATGAGCTACCAGTCTGCGGCCATGGATGCCTTCATCGACGGCGCCCGCGCCGCCGCC GCCAACGGCGACAAGGCGGCCTATGATGCGGACGTGAAGGGCATGGTGGACCTCGCCTTCGCCGACGTGCCGCGCGTGCC GCTGTTCCAGCCTTATGTGAACGTCGCCATGCAGAAGAACATCACCGGCTACGAATACTGGTTCCACCGCCGGCTCGATT ATCGCGCGCTCCAGAAGGGCTGA
Upstream 100 bases:
>100_bases GATAACTTCATGTATAATAATGCTTTTTAAATTTTAGTATGCAATTGGCATAGTGCTTGAATGGTTGGGCGAGGCCGCTT TCAGACGGGGATCCTTGCCT
Downstream 100 bases:
>100_bases GTCCGCCTGCCGGGGTAGGGCGCGCGCGTCGCGCGCGTCCCGAATGCCCCCTCCCAACCCTCCCCCGCAAGCGGGAGAGG GCTTTCTCGCTCAGTCTTCC
Product: twin-arginine translocation pathway signal precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MNRREFLTTASATAAAAGAAVSAPAVFSPAKAQARSETLLIVSESGPNNLDIHGVGTNVPGYEASWNCYDRLITHPMKDV NGTPYYDRDKFEGELAEDMSIGDMSVTFKLKKDATFQDGTPVTAKDVKWSLDRAVSVGGFPTFQMKAGSLEKPEQFVVVD DRTIRVDFIRKDRLTIPDLAVIVPCVINSELVKKNATAQDPWGLEYTKQNTVGSGAYKVTKWTPGTEVIFERFDNWKGGP LPKVKRVIWRMVPSSGNRRALLERGDADISYDLPNKDFAELKSNPKLNIISTPYSNGVQYIGMNVTKPPFNNPKVRQAVA YALPYEKIMEAVLFGLANPMFGAPADYQTKVAWPQPTKYKTDIAKAKALLAEAGYADGFETTLSFDLGFAGVNEPLCVLV QESLAQIGIKTTINKIPGANWRTELNKKELPLFTNVFSGWLDYPEYFFFWCYHGSNSVFNTMSYQSAAMDAFIDGARAAA ANGDKAAYDADVKGMVDLAFADVPRVPLFQPYVNVAMQKNITGYEYWFHRRLDYRALQKG
Sequences:
>Translated_540_residues MNRREFLTTASATAAAAGAAVSAPAVFSPAKAQARSETLLIVSESGPNNLDIHGVGTNVPGYEASWNCYDRLITHPMKDV NGTPYYDRDKFEGELAEDMSIGDMSVTFKLKKDATFQDGTPVTAKDVKWSLDRAVSVGGFPTFQMKAGSLEKPEQFVVVD DRTIRVDFIRKDRLTIPDLAVIVPCVINSELVKKNATAQDPWGLEYTKQNTVGSGAYKVTKWTPGTEVIFERFDNWKGGP LPKVKRVIWRMVPSSGNRRALLERGDADISYDLPNKDFAELKSNPKLNIISTPYSNGVQYIGMNVTKPPFNNPKVRQAVA YALPYEKIMEAVLFGLANPMFGAPADYQTKVAWPQPTKYKTDIAKAKALLAEAGYADGFETTLSFDLGFAGVNEPLCVLV QESLAQIGIKTTINKIPGANWRTELNKKELPLFTNVFSGWLDYPEYFFFWCYHGSNSVFNTMSYQSAAMDAFIDGARAAA ANGDKAAYDADVKGMVDLAFADVPRVPLFQPYVNVAMQKNITGYEYWFHRRLDYRALQKG >Mature_540_residues MNRREFLTTASATAAAAGAAVSAPAVFSPAKAQARSETLLIVSESGPNNLDIHGVGTNVPGYEASWNCYDRLITHPMKDV NGTPYYDRDKFEGELAEDMSIGDMSVTFKLKKDATFQDGTPVTAKDVKWSLDRAVSVGGFPTFQMKAGSLEKPEQFVVVD DRTIRVDFIRKDRLTIPDLAVIVPCVINSELVKKNATAQDPWGLEYTKQNTVGSGAYKVTKWTPGTEVIFERFDNWKGGP LPKVKRVIWRMVPSSGNRRALLERGDADISYDLPNKDFAELKSNPKLNIISTPYSNGVQYIGMNVTKPPFNNPKVRQAVA YALPYEKIMEAVLFGLANPMFGAPADYQTKVAWPQPTKYKTDIAKAKALLAEAGYADGFETTLSFDLGFAGVNEPLCVLV QESLAQIGIKTTINKIPGANWRTELNKKELPLFTNVFSGWLDYPEYFFFWCYHGSNSVFNTMSYQSAAMDAFIDGARAAA ANGDKAAYDADVKGMVDLAFADVPRVPLFQPYVNVAMQKNITGYEYWFHRRLDYRALQKG
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=453, Percent_Identity=28.476821192053, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1787762, Length=509, Percent_Identity=26.7190569744597, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789966, Length=442, Percent_Identity=25.5656108597285, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787495, Length=542, Percent_Identity=24.3542435424354, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787551, Length=356, Percent_Identity=25.2808988764045, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1789887, Length=221, Percent_Identity=26.2443438914027, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 59862; Mature: 59862
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRREFLTTASATAAAAGAAVSAPAVFSPAKAQARSETLLIVSESGPNNLDIHGVGTNVP CCCHHEEEECCHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEEECCCCC GYEASWNCYDRLITHPMKDVNGTPYYDRDKFEGELAEDMSIGDMSVTFKLKKDATFQDGT CCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCC PVTAKDVKWSLDRAVSVGGFPTFQMKAGSLEKPEQFVVVDDRTIRVDFIRKDRLTIPDLA CCCHHHCHHHHHHEEECCCCCEEEECCCCCCCCCEEEEECCCEEEEEEEECCCCCCCHHH VIVPCVINSELVKKNATAQDPWGLEYTKQNTVGSGAYKVTKWTPGTEVIFERFDNWKGGP HHHHHHHCHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCC LPKVKRVIWRMVPSSGNRRALLERGDADISYDLPNKDFAELKSNPKLNIISTPYSNGVQY CHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCHHHHHCCCCCEEEEECCCCCCEEE IGMNVTKPPFNNPKVRQAVAYALPYEKIMEAVLFGLANPMFGAPADYQTKVAWPQPTKYK EEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHH TDIAKAKALLAEAGYADGFETTLSFDLGFAGVNEPLCVLVQESLAQIGIKTTINKIPGAN HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCC WRTELNKKELPLFTNVFSGWLDYPEYFFFWCYHGSNSVFNTMSYQSAAMDAFIDGARAAA CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCHHHC ANGDKAAYDADVKGMVDLAFADVPRVPLFQPYVNVAMQKNITGYEYWFHRRLDYRALQKG CCCCCCEECCCCCCCEEEHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHCCC >Mature Secondary Structure MNRREFLTTASATAAAAGAAVSAPAVFSPAKAQARSETLLIVSESGPNNLDIHGVGTNVP CCCHHEEEECCHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEEECCCCC GYEASWNCYDRLITHPMKDVNGTPYYDRDKFEGELAEDMSIGDMSVTFKLKKDATFQDGT CCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCC PVTAKDVKWSLDRAVSVGGFPTFQMKAGSLEKPEQFVVVDDRTIRVDFIRKDRLTIPDLA CCCHHHCHHHHHHEEECCCCCEEEECCCCCCCCCEEEEECCCEEEEEEEECCCCCCCHHH VIVPCVINSELVKKNATAQDPWGLEYTKQNTVGSGAYKVTKWTPGTEVIFERFDNWKGGP HHHHHHHCHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCC LPKVKRVIWRMVPSSGNRRALLERGDADISYDLPNKDFAELKSNPKLNIISTPYSNGVQY CHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCHHHHHCCCCCEEEEECCCCCCEEE IGMNVTKPPFNNPKVRQAVAYALPYEKIMEAVLFGLANPMFGAPADYQTKVAWPQPTKYK EEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHH TDIAKAKALLAEAGYADGFETTLSFDLGFAGVNEPLCVLVQESLAQIGIKTTINKIPGAN HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCC WRTELNKKELPLFTNVFSGWLDYPEYFFFWCYHGSNSVFNTMSYQSAAMDAFIDGARAAA CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCHHHC ANGDKAAYDADVKGMVDLAFADVPRVPLFQPYVNVAMQKNITGYEYWFHRRLDYRALQKG CCCCCCEECCCCCCCEEEHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA