| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is pssA [H]
Identifier: 158423134
GI number: 158423134
Start: 1716797
End: 1717612
Strand: Direct
Name: pssA [H]
Synonym: AZC_1510
Alternate gene names: 158423134
Gene position: 1716797-1717612 (Clockwise)
Preceding gene: 158423133
Following gene: 158423135
Centisome position: 31.97
GC content: 66.79
Gene sequence:
>816_bases ATGACCCTGCCTTTCCCGCCCTTCGACCCCAACGGCCAGAGCACGGAGCGGCCGCGCCGTTTCGCCCGCATTCCGCTGCG GCTGCTGCTGCCCAATATGGTCACCCTGCTGGCCCTGTGCTCGGGCCTGACCGCAGTGCGCATGGCCATCGAGCACCGCA TGGAACTGGCGCTGGCGGCCATCGTCTTTGCGGCTCTGCTGGACGGCGTGGACGGGCGGCTGGCGCGGGCGCTGAAGGGC ACCTCGCGCTTCGGGGCGGAACTGGACAGCCTCGCGGACTTCGTGAATTTCGGCTGCGCGCCGGCGCTCATCCTCTATCT CTGGGGGCTGGACGAGGCGGGCTCGCTGGGCTGGATCGGCGCCCTCATCTTCGCCATCTGCGCAGCACTGCGGCTCGCCC GCTTCAACGTGATGCTGGATGATCCCAACCGTCCGGCCTTCACCGCCGACTTCTTCACCGGCATTCCGGCTCCGGCAGGC GCCATCACCGTGCTGCTGCCGGTTTATCTGGAACTCCTCGGCATTCCGCACGTGACCCTGAGTGCGCCCATGGCGCTGAT CTATTGCCTCGCCATCGGCGTGCTGATGATCTCCAAGGTGCCTGCCTGGTCGGGCAAGACGCTCGGCAAGCGGGTCCGGC GGGATATGGTGCTGCCGCTGTTCGTGCTCTTCGCGGTGTTTGCCGGGCTACTGGCCAGTTACCCCTGGTTGGTTCTGTCT GTGTGCAGCGTTCTCTATCTCGCCATGTTGCCGCTCTCGGCGCTGCGCTACCGACGACTGATGGCAGAGCACGTGGCGGG CTTGCCGCCGCAATAG
Upstream 100 bases:
>100_bases GTCTCCGAGGGGCAACTCACCGTCGCCGGCGAGACCATCCTCGCCGATTACGACGCCGCACCCACCCGCGACATCGCCTT CCGGGTCTCGTGAGGCTGAG
Downstream 100 bases:
>100_bases AAACGTTGTCGTGACGGCATGCTTTCACCAACTCGCCGTCCGTTTTGGGCTGCGCCGCAATTTCGTGCAGTGGTGCGATG ATCCTGCAAGCATGGCAAAA
Product: CDP-diacylglycerol-serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTLPFPPFDPNGQSTERPRRFARIPLRLLLPNMVTLLALCSGLTAVRMAIEHRMELALAAIVFAALLDGVDGRLARALKG TSRFGAELDSLADFVNFGCAPALILYLWGLDEAGSLGWIGALIFAICAALRLARFNVMLDDPNRPAFTADFFTGIPAPAG AITVLLPVYLELLGIPHVTLSAPMALIYCLAIGVLMISKVPAWSGKTLGKRVRRDMVLPLFVLFAVFAGLLASYPWLVLS VCSVLYLAMLPLSALRYRRLMAEHVAGLPPQ
Sequences:
>Translated_271_residues MTLPFPPFDPNGQSTERPRRFARIPLRLLLPNMVTLLALCSGLTAVRMAIEHRMELALAAIVFAALLDGVDGRLARALKG TSRFGAELDSLADFVNFGCAPALILYLWGLDEAGSLGWIGALIFAICAALRLARFNVMLDDPNRPAFTADFFTGIPAPAG AITVLLPVYLELLGIPHVTLSAPMALIYCLAIGVLMISKVPAWSGKTLGKRVRRDMVLPLFVLFAVFAGLLASYPWLVLS VCSVLYLAMLPLSALRYRRLMAEHVAGLPPQ >Mature_270_residues TLPFPPFDPNGQSTERPRRFARIPLRLLLPNMVTLLALCSGLTAVRMAIEHRMELALAAIVFAALLDGVDGRLARALKGT SRFGAELDSLADFVNFGCAPALILYLWGLDEAGSLGWIGALIFAICAALRLARFNVMLDDPNRPAFTADFFTGIPAPAGA ITVLLPVYLELLGIPHVTLSAPMALIYCLAIGVLMISKVPAWSGKTLGKRVRRDMVLPLFVLFAVFAGLLASYPWLVLSV CSVLYLAMLPLSALRYRRLMAEHVAGLPPQ
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=163, Percent_Identity=29.4478527607362, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29373; Mature: 29241
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPFPPFDPNGQSTERPRRFARIPLRLLLPNMVTLLALCSGLTAVRMAIEHRMELALAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVFAALLDGVDGRLARALKGTSRFGAELDSLADFVNFGCAPALILYLWGLDEAGSLGWIG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHH ALIFAICAALRLARFNVMLDDPNRPAFTADFFTGIPAPAGAITVLLPVYLELLGIPHVTL HHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHH SAPMALIYCLAIGVLMISKVPAWSGKTLGKRVRRDMVLPLFVLFAVFAGLLASYPWLVLS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCSVLYLAMLPLSALRYRRLMAEHVAGLPPQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLPFPPFDPNGQSTERPRRFARIPLRLLLPNMVTLLALCSGLTAVRMAIEHRMELALAA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVFAALLDGVDGRLARALKGTSRFGAELDSLADFVNFGCAPALILYLWGLDEAGSLGWIG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHH ALIFAICAALRLARFNVMLDDPNRPAFTADFFTGIPAPAGAITVLLPVYLELLGIPHVTL HHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHH SAPMALIYCLAIGVLMISKVPAWSGKTLGKRVRRDMVLPLFVLFAVFAGLLASYPWLVLS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCSVLYLAMLPLSALRYRRLMAEHVAGLPPQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]