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The map label for this gene is psd

Identifier: 158423133

GI number: 158423133

Start: 1716088

End: 1716789

Strand: Direct

Name: psd

Synonym: AZC_1509

Alternate gene names: 158423133

Gene position: 1716088-1716789 (Clockwise)

Preceding gene: 158423132

Following gene: 158423134

Centisome position: 31.96

GC content: 65.95

Gene sequence:

>702_bases
GTGTCCGTTCTCACCTCCATCCGCAAGTCGCTCGTTCCGATCCATCGCGAGGGCTATCCCTTCATCGCCATTGCGGTCGT
GATCGCCATCGGACTCCTGTCGGTGTCCACCTTCTTCGGCATGCTGGCGGTGGGCCTTGCCATCTGGACCGCGCTTTTCT
TCCGCGATCCGCAGCGCGTCACGCCGCTGCGCGAGGGGCTCGTGGTGGCGCCGGCGGACGGGCGGATTTCCCAGATCGGC
CTTGCGCTTCCCCCGCGCGAGCTTGGCCTCTCCGAGGTGCCGCTGCTGCGCATCTCCATCTTCATGAACGTCTTCAACGT
CCATGTGAACCGTGCGCCGGTCACCGGCCGCATCGAGAAGATCGCCTACAAGCCGGGCCTCTTCCTCAATGCGGAGCTCG
ACAAGGCGAGCGAGGACAATGAGCGCAACGGCCTCATCATCCACGGCCCCAACGGTGTGGTGGGCGTGGTGCAGATCGCG
GGCCTCATCGCCCGGCGAATCGTAAGCTTCGTGCATGAAGGCGAGACGATCGGCGCCGGCGAGCGCTTCGGACTCATCCG
CTTCGGCTCGCGGGTCGATGTCTATCTCCCCGTGGGCACGCGGGTTCTCGTCTCCGAGGGGCAACTCACCGTCGCCGGCG
AGACCATCCTCGCCGATTACGACGCCGCACCCACCCGCGACATCGCCTTCCGGGTCTCGTGA

Upstream 100 bases:

>100_bases
TGCCACATGGCTGCCGTCCGCGCAGGATATTTGACGCCGAAGCGCCCCGCCACTACCTCTTGGCGCCAGAAAAGCCCTTT
GGGCGCATCCGGAGACACGC

Downstream 100 bases:

>100_bases
GGCTGAGATGACCCTGCCTTTCCCGCCCTTCGACCCCAACGGCCAGAGCACGGAGCGGCCGCGCCGTTTCGCCCGCATTC
CGCTGCGGCTGCTGCTGCCC

Product: phosphatidylserine decarboxylase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSVLTSIRKSLVPIHREGYPFIAIAVVIAIGLLSVSTFFGMLAVGLAIWTALFFRDPQRVTPLREGLVVAPADGRISQIG
LALPPRELGLSEVPLLRISIFMNVFNVHVNRAPVTGRIEKIAYKPGLFLNAELDKASEDNERNGLIIHGPNGVVGVVQIA
GLIARRIVSFVHEGETIGAGERFGLIRFGSRVDVYLPVGTRVLVSEGQLTVAGETILADYDAAPTRDIAFRVS

Sequences:

>Translated_233_residues
MSVLTSIRKSLVPIHREGYPFIAIAVVIAIGLLSVSTFFGMLAVGLAIWTALFFRDPQRVTPLREGLVVAPADGRISQIG
LALPPRELGLSEVPLLRISIFMNVFNVHVNRAPVTGRIEKIAYKPGLFLNAELDKASEDNERNGLIIHGPNGVVGVVQIA
GLIARRIVSFVHEGETIGAGERFGLIRFGSRVDVYLPVGTRVLVSEGQLTVAGETILADYDAAPTRDIAFRVS
>Mature_232_residues
SVLTSIRKSLVPIHREGYPFIAIAVVIAIGLLSVSTFFGMLAVGLAIWTALFFRDPQRVTPLREGLVVAPADGRISQIGL
ALPPRELGLSEVPLLRISIFMNVFNVHVNRAPVTGRIEKIAYKPGLFLNAELDKASEDNERNGLIIHGPNGVVGVVQIAG
LIARRIVSFVHEGETIGAGERFGLIRFGSRVDVYLPVGTRVLVSEGQLTVAGETILADYDAAPTRDIAFRVS

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_AZOC5 (A8HXJ6)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001524425.1
- GeneID:   5690075
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_1509
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   CLSK980372
- BioCyc:   ACAU438753:AZC_1509-MONOMER
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 25162; Mature: 25031

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLTSIRKSLVPIHREGYPFIAIAVVIAIGLLSVSTFFGMLAVGLAIWTALFFRDPQRV
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPLREGLVVAPADGRISQIGLALPPRELGLSEVPLLRISIFMNVFNVHVNRAPVTGRIEK
CHHHCCEEEECCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHH
IAYKPGLFLNAELDKASEDNERNGLIIHGPNGVVGVVQIAGLIARRIVSFVHEGETIGAG
EEECCCEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
ERFGLIRFGSRVDVYLPVGTRVLVSEGQLTVAGETILADYDAAPTRDIAFRVS
CCEEEEEECCEEEEEECCCCEEEEECCEEEEECCEEEECCCCCCCCCEEEEEC
>Mature Secondary Structure 
SVLTSIRKSLVPIHREGYPFIAIAVVIAIGLLSVSTFFGMLAVGLAIWTALFFRDPQRV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPLREGLVVAPADGRISQIGLALPPRELGLSEVPLLRISIFMNVFNVHVNRAPVTGRIEK
CHHHCCEEEECCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHH
IAYKPGLFLNAELDKASEDNERNGLIIHGPNGVVGVVQIAGLIARRIVSFVHEGETIGAG
EEECCCEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
ERFGLIRFGSRVDVYLPVGTRVLVSEGQLTVAGETILADYDAAPTRDIAFRVS
CCEEEEEECCEEEEEECCCCEEEEECCEEEEECCEEEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA