| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yeaX [H]
Identifier: 158422996
GI number: 158422996
Start: 1552274
End: 1553209
Strand: Direct
Name: yeaX [H]
Synonym: AZC_1372
Alternate gene names: 158422996
Gene position: 1552274-1553209 (Clockwise)
Preceding gene: 158422995
Following gene: 158422997
Centisome position: 28.91
GC content: 68.06
Gene sequence:
>936_bases GTGGCGGAAACGGAACTGCTCACCCCCGACATCCGCCGCGTCCGCTTCGTCGCGACATCCGGCGCGCCGCTGCCGCTGTT CTCTGGCGGCGCCCATGTGGTGGTGAGCCTGCCGACGCCGCGCGGGGTCCTTCGCAATCCCTATTCCCTTACGAGTTGCC CAACCGACGGGTCGGGCTATGAGATCTGTGTGCAGAAATCGGCCACGTCGCGCGGCGGCTCGGCCTTCGTCCATGAAGGG CTCGCCGCCGGGGACGAACTCGAAATCTCCTGGCCCGTGAACCTCTTCGGCATGGACCGTCGGGCCCGCAAGCATCTCTT CATCGCCGGCGGCATCGGCATCACGCCTTTCCTCTCCATGATGCAGCAACTGGCCATGGAGGGCGGCACGTTCGAGCTGC ATTATGCCATGCGCAGCCCGGACACCGGCGCCGCGCGGGAGATGGTGGCGGAGCGCTACGGTGCCCACCGGGTGCGCACC TATGTCAGCTCCCATGGCACGCGCATCCCGCTGCCCGATCTGCTGGACGGTCAACCGCTGGGCACGCACCTCTATGTTTG CGGACCCACACGCCTCATCGACGACGTGCTGCTTCAGGCCCGCGAGGCGGGATGGCCGGACGAGAACGTGCACAGCGAGC GCTTCGCCGCGCCGCCGCCCGGAAAACCCTTCCTGCTGGAACTCGCGCGCAGCGGCCAGCGCATCGAGGTCGGTTCGCAC CAGAGCGTTCTGGAGGCCATGGAGGCGGCCGGCCTGTCCGCCCCCAATCTCTGCCGGGGTGGGGCGTGCGGCCAGTGCGA GACGGGCGTTCTCGCCTGTGATGGCGCGCTCGAACATCACGACCATTTCCTGTCTCCCGACGAGCGGGCGGGCGGGCGGA AATTCATGATCTGCATCTCGCGCATCGCCGGCGAGCGACTGGTGCTCGACCTCTGA
Upstream 100 bases:
>100_bases GCGCCTTTCAGGGCGTGTGCATCGATGCCGAAGTGCCCGGCGATCGCCCCGCTGTCGAGGAGCTCTATCCATGAGCGGCG CGCCCACCTTGTCCGTCCGC
Downstream 100 bases:
>100_bases CTTCCAATCCGTGCCTGCCCCCGCGCGGGCGTTCGGGCCAGCCCGAGGAGTTTCCGATGACCATCGTGTTCAAGGACGAG AGCTTCCGGGGCGACTACCG
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAETELLTPDIRRVRFVATSGAPLPLFSGGAHVVVSLPTPRGVLRNPYSLTSCPTDGSGYEICVQKSATSRGGSAFVHEG LAAGDELEISWPVNLFGMDRRARKHLFIAGGIGITPFLSMMQQLAMEGGTFELHYAMRSPDTGAAREMVAERYGAHRVRT YVSSHGTRIPLPDLLDGQPLGTHLYVCGPTRLIDDVLLQAREAGWPDENVHSERFAAPPPGKPFLLELARSGQRIEVGSH QSVLEAMEAAGLSAPNLCRGGACGQCETGVLACDGALEHHDHFLSPDERAGGRKFMICISRIAGERLVLDL
Sequences:
>Translated_311_residues MAETELLTPDIRRVRFVATSGAPLPLFSGGAHVVVSLPTPRGVLRNPYSLTSCPTDGSGYEICVQKSATSRGGSAFVHEG LAAGDELEISWPVNLFGMDRRARKHLFIAGGIGITPFLSMMQQLAMEGGTFELHYAMRSPDTGAAREMVAERYGAHRVRT YVSSHGTRIPLPDLLDGQPLGTHLYVCGPTRLIDDVLLQAREAGWPDENVHSERFAAPPPGKPFLLELARSGQRIEVGSH QSVLEAMEAAGLSAPNLCRGGACGQCETGVLACDGALEHHDHFLSPDERAGGRKFMICISRIAGERLVLDL >Mature_310_residues AETELLTPDIRRVRFVATSGAPLPLFSGGAHVVVSLPTPRGVLRNPYSLTSCPTDGSGYEICVQKSATSRGGSAFVHEGL AAGDELEISWPVNLFGMDRRARKHLFIAGGIGITPFLSMMQQLAMEGGTFELHYAMRSPDTGAAREMVAERYGAHRVRTY VSSHGTRIPLPDLLDGQPLGTHLYVCGPTRLIDDVLLQAREAGWPDENVHSERFAAPPPGKPFLLELARSGQRIEVGSHQ SVLEAMEAAGLSAPNLCRGGACGQCETGVLACDGALEHHDHFLSPDERAGGRKFMICISRIAGERLVLDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788104, Length=313, Percent_Identity=43.1309904153355, Blast_Score=245, Evalue=2e-66, Organism=Escherichia coli, GI1787658, Length=314, Percent_Identity=28.343949044586, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 33465; Mature: 33333
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETELLTPDIRRVRFVATSGAPLPLFSGGAHVVVSLPTPRGVLRNPYSLTSCPTDGSGY CCCCCCCCCCCCEEEEEEECCCCCCEECCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCE EICVQKSATSRGGSAFVHEGLAAGDELEISWPVNLFGMDRRARKHLFIAGGIGITPFLSM EEEEECCCCCCCCCHHHHHHCCCCCCEEEECCCEEECCCCCCCCEEEEECCCCHHHHHHH MQQLAMEGGTFELHYAMRSPDTGAAREMVAERYGAHRVRTYVSSHGTRIPLPDLLDGQPL HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCC GTHLYVCGPTRLIDDVLLQAREAGWPDENVHSERFAAPPPGKPFLLELARSGQRIEVGSH CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCH QSVLEAMEAAGLSAPNLCRGGACGQCETGVLACDGALEHHDHFLSPDERAGGRKFMICIS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCEEEEEHH RIAGERLVLDL HHCCCEEEEEC >Mature Secondary Structure AETELLTPDIRRVRFVATSGAPLPLFSGGAHVVVSLPTPRGVLRNPYSLTSCPTDGSGY CCCCCCCCCCCEEEEEEECCCCCCEECCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCE EICVQKSATSRGGSAFVHEGLAAGDELEISWPVNLFGMDRRARKHLFIAGGIGITPFLSM EEEEECCCCCCCCCHHHHHHCCCCCCEEEECCCEEECCCCCCCCEEEEECCCCHHHHHHH MQQLAMEGGTFELHYAMRSPDTGAAREMVAERYGAHRVRTYVSSHGTRIPLPDLLDGQPL HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCC GTHLYVCGPTRLIDDVLLQAREAGWPDENVHSERFAAPPPGKPFLLELARSGQRIEVGSH CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCH QSVLEAMEAAGLSAPNLCRGGACGQCETGVLACDGALEHHDHFLSPDERAGGRKFMICIS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCEEEEEHH RIAGERLVLDL HHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]