| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422994
Identifier: 158422994
GI number: 158422994
Start: 1549789
End: 1551570
Strand: Direct
Name: 158422994
Synonym: AZC_1370
Alternate gene names: NA
Gene position: 1549789-1551570 (Clockwise)
Preceding gene: 158422992
Following gene: 158422995
Centisome position: 28.86
GC content: 63.3
Gene sequence:
>1782_bases ATGACAATGGAAGCGACTGTGCCCATCGCGCTTGGGCAGACGAGTGAGCTGAAGCGCGCCATCGACTGGCGCGGGGCATT CTGGGTGGCGAGCGGCGTGCCGGCGCTGGTCCTTTTCTCCATCGGCGGCATCGCGGGCACCACCGGCAAGGTGGCGTTCC TCGTATGGTTCGTCTCCATGGTGATGGGCTTCATCCAGTCCTTCACCTATGCGGAAATCGCTGGCCTCTTCCCCAACAAG TCCGGCGGCGCCTCCGTCTATGGCGCGGCGGCCTGGGTGCGCTATTCCAAGCTGATCGCGCCCCTTTCGGTCTGGTGCAA CTGGTTCGCCTGGTCGCCCGTGCTCTCGCTCGGCTGCTCCATCGCGGCGGCTTACATCCTGAACGTGCTGGCGCCCATTC CCGGCGCCGACAATCCCGAAGTGGCGAAATGGATCGCCGCCCATGCCGGTTCGGTGGCGGCGGATTCTCCCCGCGTCGCC GAATGGCTCGCGCTTAACGCCGGCAAGACGGCGCAGGATGCCGTCACCGCCCTCATCGCGCAGGATGGCATCGCTGCCTT TACGCCCGCGCTGCGGAGCTGGACGCTGTTCTCCCACAGTCTCGGCCCGGTCAGCTTCTCGCTGAACGCCACCTTCTGGA TCGGCGCGGTGTTGATGCTCGTCACCTTCGCGATCCAGCACCGCGGCATCCTCGGCACCGCCAACGTGCAGAAATACATC GGTCTTCTGGTCATCATCCCGATGCTGATCGTAGGCATCGTCCCGATCATCACCGGCCAGATCAACTGGTCGAACTACAC GCCGCTCGCGCCTTTGGCCGTAGCCTATGCGCCAGGCCTCGGGGAATGGAACATCGGCGGCTGGACGCTGGTTCTGGGCG GCCTCTTCATCGCGGCCTGGTCCACATACGGCTTCGAAACCGCCATCTGCTACACCAGCGAGTTCCGGGATCCGAAGACG GACACTTTCAAGGCCATCTTCTATTCCGGCCTGCTGTGCCTGCTGCTTTATACGCTCGTGCCCTTCACCTTCCAGGGTGT GCTCGGCATCGACGGGATGCTTGATCCCACCGTGGTCGATGGCTCGGGTGTTGCGGCGGCCATGGCCGGAATGGTGGGCG GCGGCGGTTTCGTCACCAGCATTCTCATCCTGCTGATGATCCTGGCGCTCATGCTCTCCATCATGACGGCGATGGCAGGC TCCTCGCGCACCCTTTATCAGGGTTCGGTGGATGGCTGGTTGCCGCGCTACCTCAGCCATGTGAACGAGCACGGCGCGCC GACGCGGGCCATGTGGACGGATCTTGTCGTCAACCTGTTCGCGCTCGCTATCGCGGCGGCCGACGCCACCAGCTTCTTCT TCCTGCTGGCGGTTTCCAATGTGGGCTACATCATCTTCAACTTCCTGAACCTCAATGCGGGCTGGATTCACCGAATCGAC AATGCCCACGTGAAGCGGCCGTGGAAGGCGCCCAATATTCTCATCGCGCTGGGCACGCTCTTCGCCTTCGTCAATGCCGC CTTCATGGGGGCTGGTGCGAAGGTGTGGAACCCCTCAGCACTGACGGCCGGCTTCATCACGGCGGCCCTCATCATCCCCG TCTTCGTCTATCGCCACTACATCCAGGACAAGGGCGTCTTTCCGGACCACATGCTGGAAGACCTGCAACTGACCGAGAAG GAGATGACGGTGCGCAAGGCCGGGATCTGGCCCTACGTGACCCTCATTGCCGGTGTTGCCGTGGTGCTCATCGCCAACCG CATCTTCGTCCTGCCCGGCTGA
Upstream 100 bases:
>100_bases TAATCGAGTGAGCCGCACCGAAGTGACGGCCCCAACCATAAACAACCAATAAAATAAAAACTGGTCCAGATTGGTTTTGC CAACCTTGAGGGGTCACCAC
Downstream 100 bases:
>100_bases CCGGGGCCTTGTGAACCGGCCGGAGGGACGAAGTTCTCTCCGGCCGACCTTCCAGAGCAGGGAATGTGTCCATGCTGTCG CCGAGCATCTTCAGCAGGCC
Product: amino acid transporter permease
Products: NA
Alternate protein names: Amino Acid Transporter; Amino Acid Permease; Amino Acid Transporter Permease Protein; Amino Acid Permease Superfamily; Amino Acid Transporter-Like Protein; Dimethylamine Permease; Amino Acid Permease-Like Protein
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MTMEATVPIALGQTSELKRAIDWRGAFWVASGVPALVLFSIGGIAGTTGKVAFLVWFVSMVMGFIQSFTYAEIAGLFPNK SGGASVYGAAAWVRYSKLIAPLSVWCNWFAWSPVLSLGCSIAAAYILNVLAPIPGADNPEVAKWIAAHAGSVAADSPRVA EWLALNAGKTAQDAVTALIAQDGIAAFTPALRSWTLFSHSLGPVSFSLNATFWIGAVLMLVTFAIQHRGILGTANVQKYI GLLVIIPMLIVGIVPIITGQINWSNYTPLAPLAVAYAPGLGEWNIGGWTLVLGGLFIAAWSTYGFETAICYTSEFRDPKT DTFKAIFYSGLLCLLLYTLVPFTFQGVLGIDGMLDPTVVDGSGVAAAMAGMVGGGGFVTSILILLMILALMLSIMTAMAG SSRTLYQGSVDGWLPRYLSHVNEHGAPTRAMWTDLVVNLFALAIAAADATSFFFLLAVSNVGYIIFNFLNLNAGWIHRID NAHVKRPWKAPNILIALGTLFAFVNAAFMGAGAKVWNPSALTAGFITAALIIPVFVYRHYIQDKGVFPDHMLEDLQLTEK EMTVRKAGIWPYVTLIAGVAVVLIANRIFVLPG
Sequences:
>Translated_593_residues MTMEATVPIALGQTSELKRAIDWRGAFWVASGVPALVLFSIGGIAGTTGKVAFLVWFVSMVMGFIQSFTYAEIAGLFPNK SGGASVYGAAAWVRYSKLIAPLSVWCNWFAWSPVLSLGCSIAAAYILNVLAPIPGADNPEVAKWIAAHAGSVAADSPRVA EWLALNAGKTAQDAVTALIAQDGIAAFTPALRSWTLFSHSLGPVSFSLNATFWIGAVLMLVTFAIQHRGILGTANVQKYI GLLVIIPMLIVGIVPIITGQINWSNYTPLAPLAVAYAPGLGEWNIGGWTLVLGGLFIAAWSTYGFETAICYTSEFRDPKT DTFKAIFYSGLLCLLLYTLVPFTFQGVLGIDGMLDPTVVDGSGVAAAMAGMVGGGGFVTSILILLMILALMLSIMTAMAG SSRTLYQGSVDGWLPRYLSHVNEHGAPTRAMWTDLVVNLFALAIAAADATSFFFLLAVSNVGYIIFNFLNLNAGWIHRID NAHVKRPWKAPNILIALGTLFAFVNAAFMGAGAKVWNPSALTAGFITAALIIPVFVYRHYIQDKGVFPDHMLEDLQLTEK EMTVRKAGIWPYVTLIAGVAVVLIANRIFVLPG >Mature_592_residues TMEATVPIALGQTSELKRAIDWRGAFWVASGVPALVLFSIGGIAGTTGKVAFLVWFVSMVMGFIQSFTYAEIAGLFPNKS GGASVYGAAAWVRYSKLIAPLSVWCNWFAWSPVLSLGCSIAAAYILNVLAPIPGADNPEVAKWIAAHAGSVAADSPRVAE WLALNAGKTAQDAVTALIAQDGIAAFTPALRSWTLFSHSLGPVSFSLNATFWIGAVLMLVTFAIQHRGILGTANVQKYIG LLVIIPMLIVGIVPIITGQINWSNYTPLAPLAVAYAPGLGEWNIGGWTLVLGGLFIAAWSTYGFETAICYTSEFRDPKTD TFKAIFYSGLLCLLLYTLVPFTFQGVLGIDGMLDPTVVDGSGVAAAMAGMVGGGGFVTSILILLMILALMLSIMTAMAGS SRTLYQGSVDGWLPRYLSHVNEHGAPTRAMWTDLVVNLFALAIAAADATSFFFLLAVSNVGYIIFNFLNLNAGWIHRIDN AHVKRPWKAPNILIALGTLFAFVNAAFMGAGAKVWNPSALTAGFITAALIIPVFVYRHYIQDKGVFPDHMLEDLQLTEKE MTVRKAGIWPYVTLIAGVAVVLIANRIFVLPG
Specific function: Unknown
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63373; Mature: 63242
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMEATVPIALGQTSELKRAIDWRGAFWVASGVPALVLFSIGGIAGTTGKVAFLVWFVSM CCCCEEEEEEECCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH VMGFIQSFTYAEIAGLFPNKSGGASVYGAAAWVRYSKLIAPLSVWCNWFAWSPVLSLGCS HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAAYILNVLAPIPGADNPEVAKWIAAHAGSVAADSPRVAEWLALNAGKTAQDAVTALIA HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH QDGIAAFTPALRSWTLFSHSLGPVSFSLNATFWIGAVLMLVTFAIQHRGILGTANVQKYI HCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHH GLLVIIPMLIVGIVPIITGQINWSNYTPLAPLAVAYAPGLGEWNIGGWTLVLGGLFIAAW HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH STYGFETAICYTSEFRDPKTDTFKAIFYSGLLCLLLYTLVPFTFQGVLGIDGMLDPTVVD HHCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC GSGVAAAMAGMVGGGGFVTSILILLMILALMLSIMTAMAGSSRTLYQGSVDGWLPRYLSH CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHH VNEHGAPTRAMWTDLVVNLFALAIAAADATSFFFLLAVSNVGYIIFNFLNLNAGWIHRID HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCHHEECC NAHVKRPWKAPNILIALGTLFAFVNAAFMGAGAKVWNPSALTAGFITAALIIPVFVYRHY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IQDKGVFPDHMLEDLQLTEKEMTVRKAGIWPYVTLIAGVAVVLIANRIFVLPG HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure TMEATVPIALGQTSELKRAIDWRGAFWVASGVPALVLFSIGGIAGTTGKVAFLVWFVSM CCCEEEEEEECCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH VMGFIQSFTYAEIAGLFPNKSGGASVYGAAAWVRYSKLIAPLSVWCNWFAWSPVLSLGCS HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAAYILNVLAPIPGADNPEVAKWIAAHAGSVAADSPRVAEWLALNAGKTAQDAVTALIA HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH QDGIAAFTPALRSWTLFSHSLGPVSFSLNATFWIGAVLMLVTFAIQHRGILGTANVQKYI HCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHH GLLVIIPMLIVGIVPIITGQINWSNYTPLAPLAVAYAPGLGEWNIGGWTLVLGGLFIAAW HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH STYGFETAICYTSEFRDPKTDTFKAIFYSGLLCLLLYTLVPFTFQGVLGIDGMLDPTVVD HHCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC GSGVAAAMAGMVGGGGFVTSILILLMILALMLSIMTAMAGSSRTLYQGSVDGWLPRYLSH CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHH VNEHGAPTRAMWTDLVVNLFALAIAAADATSFFFLLAVSNVGYIIFNFLNLNAGWIHRID HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCHHEECC NAHVKRPWKAPNILIALGTLFAFVNAAFMGAGAKVWNPSALTAGFITAALIIPVFVYRHY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IQDKGVFPDHMLEDLQLTEKEMTVRKAGIWPYVTLIAGVAVVLIANRIFVLPG HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA