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The map label for this gene is uxuR [H]

Identifier: 158422993

GI number: 158422993

Start: 1548012

End: 1548773

Strand: Reverse

Name: uxuR [H]

Synonym: AZC_1369

Alternate gene names: 158422993

Gene position: 1548773-1548012 (Counterclockwise)

Preceding gene: 158423005

Following gene: 158422991

Centisome position: 28.84

GC content: 64.83

Gene sequence:

>762_bases
GTGACGGACAAGGACGCGCCGCTGGCACCGTGGGAAGAGGATGACGCGACTCATCCTTTCGTGAAGCAGGAGGTGAAGCT
CCTGGCGAAGGACCTGTTCCTCCGCATCCGGAGCGGGAAATACCCCTACGGCACCCGCATCCCGGCTGAGCGAAACCTCG
CGGAGGAGCTCGGCACGTCGCGCGCCACCGTCCGCCAGGTGCTGGCCTTCCTCGAAGGCTTCGACATGCTGTCCAAGCGC
GTAGGGAGCGGCACCTTCGTCATCTGGCGCGGCGCGGTGGCGGCCGGAGCGCGGGACGAAGAGCCCGCGGAAAAGGAGCC
TCCGCTGGCCGACGTGGTCTCGCCCTTCGAGATCAACATCACCCGCGCCATCTTCGAGCCGGAGATCGCGCGCCTCGCCG
CCATCTACATGTCCTACCGCGACCAGACGGCGCTCGGGGCGGTGCTCCAGCAGCTGGACGAGATCGTCACCGAGGCCGGG
CGTTTTGCGGATCTGGAGCGGGCGTTCTTCATGACTCTGTGCGAGGGCACGCACAATGCCCTGCTGATCGCCATGTACCG
GATCATGCACGACATCCGCCAGCAGCCGCAGTGGTATGTCAACAAGACCCGATCGCTCACGCCGGCACGCATCAAGGAGG
CCAAGCAGGGCCTGCGCTCCATCTATGCGGCGCTGGAGCGGCGCAACATAGAGAGCGCGGTGGAATGCATGCGGCTCTAC
ATCTCAAACATGCAGGAAGAACTGATCTATACGTCGTCCTGA

Upstream 100 bases:

>100_bases
CTTGTGCGACCCGGCGACCGCATCACCTAGAGCGCGATCCATCTGTTCGCTGAATCGCCCTCTAACTTATTGGGACTCCA
GCTCTCAGGGAGACCGAAAC

Downstream 100 bases:

>100_bases
GCGAAGGCCTCCTGCCCGCGCAGGGCGTGGGCATGGCGCTGGTCCCACATGAGGTTCATGGCCCGCAGGTGCCGCACCAG
TACATCGGTGTGGCGCTCCA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTDKDAPLAPWEEDDATHPFVKQEVKLLAKDLFLRIRSGKYPYGTRIPAERNLAEELGTSRATVRQVLAFLEGFDMLSKR
VGSGTFVIWRGAVAAGARDEEPAEKEPPLADVVSPFEINITRAIFEPEIARLAAIYMSYRDQTALGAVLQQLDEIVTEAG
RFADLERAFFMTLCEGTHNALLIAMYRIMHDIRQQPQWYVNKTRSLTPARIKEAKQGLRSIYAALERRNIESAVECMRLY
ISNMQEELIYTSS

Sequences:

>Translated_253_residues
MTDKDAPLAPWEEDDATHPFVKQEVKLLAKDLFLRIRSGKYPYGTRIPAERNLAEELGTSRATVRQVLAFLEGFDMLSKR
VGSGTFVIWRGAVAAGARDEEPAEKEPPLADVVSPFEINITRAIFEPEIARLAAIYMSYRDQTALGAVLQQLDEIVTEAG
RFADLERAFFMTLCEGTHNALLIAMYRIMHDIRQQPQWYVNKTRSLTPARIKEAKQGLRSIYAALERRNIESAVECMRLY
ISNMQEELIYTSS
>Mature_252_residues
TDKDAPLAPWEEDDATHPFVKQEVKLLAKDLFLRIRSGKYPYGTRIPAERNLAEELGTSRATVRQVLAFLEGFDMLSKRV
GSGTFVIWRGAVAAGARDEEPAEKEPPLADVVSPFEINITRAIFEPEIARLAAIYMSYRDQTALGAVLQQLDEIVTEAGR
FADLERAFFMTLCEGTHNALLIAMYRIMHDIRQQPQWYVNKTRSLTPARIKEAKQGLRSIYAALERRNIESAVECMRLYI
SNMQEELIYTSS

Specific function: Repressor for the uxuRBA operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790780, Length=246, Percent_Identity=27.6422764227642, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082208, Length=226, Percent_Identity=26.5486725663717, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28719; Mature: 28588

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKDAPLAPWEEDDATHPFVKQEVKLLAKDLFLRIRSGKYPYGTRIPAERNLAEELGTS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
RATVRQVLAFLEGFDMLSKRVGSGTFVIWRGAVAAGARDEEPAEKEPPLADVVSPFEINI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCCCCHHHHCCCHHHHH
TRAIFEPEIARLAAIYMSYRDQTALGAVLQQLDEIVTEAGRFADLERAFFMTLCEGTHNA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLIAMYRIMHDIRQQPQWYVNKTRSLTPARIKEAKQGLRSIYAALERRNIESAVECMRLY
HHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ISNMQEELIYTSS
HHHHHHHHHCCCC
>Mature Secondary Structure 
TDKDAPLAPWEEDDATHPFVKQEVKLLAKDLFLRIRSGKYPYGTRIPAERNLAEELGTS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
RATVRQVLAFLEGFDMLSKRVGSGTFVIWRGAVAAGARDEEPAEKEPPLADVVSPFEINI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCCCCHHHHCCCHHHHH
TRAIFEPEIARLAAIYMSYRDQTALGAVLQQLDEIVTEAGRFADLERAFFMTLCEGTHNA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLIAMYRIMHDIRQQPQWYVNKTRSLTPARIKEAKQGLRSIYAALERRNIESAVECMRLY
HHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ISNMQEELIYTSS
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]