| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is nhaA2 [H]
Identifier: 158422975
GI number: 158422975
Start: 1521354
End: 1521884
Strand: Direct
Name: nhaA2 [H]
Synonym: AZC_1351
Alternate gene names: 158422975
Gene position: 1521354-1521884 (Clockwise)
Preceding gene: 158422974
Following gene: 158422976
Centisome position: 28.33
GC content: 65.73
Gene sequence:
>531_bases ATGAGCCGGCCCATCCCCTCGCTGGCGGCCGACGACCATATTCTCGGCACTCCCAGCTTCTCCGTCACGCTGGTCGAATA TGGCGATTACCAATGCCCCTATTGTGGCGAGGCCTATCCGGTCCTCAAGGCCGTGCAGCGGGCCATGGGCGCGGACCTTC GCTTCGTGTTCCGGAACTTCCCGCTCGTCGAAGTGCACGCTCATGCTCTGCGTGCCGCCCAGTTCGCCGAGGCCGCCGCC GAAGCGGGCCTGTTCTGGGAAGCGCACGACATGCTCTACGAGAATCAGGATGCCCTCGGCGACCGCCACCTTGAGGCCTA CGCTGATCAATTGGGGATCGACCGGGCCATCCTGGCGGCCGCGTTCGAAGGGCGTCACGACGAGAAGATCCAGCGGGACT TCCTCGGCGGCGTGCGGGGCGGCGTGAACGGCACGCCGAGCCTGTTCATCAATGGCCAACTCTATGAAGGGCCGCCGGAA CCGGAAAGCCTTATCTCCGTGCTCAGCCGGGCGGCGACGACGCGCGTGTAG
Upstream 100 bases:
>100_bases TCCGCTGGTCCTACGTGTCGCCGCTCGGCATCAATCCTGGCGCGGACGGAATTCTCGAGGCGCTGGAGAAGCTGAGCGTT CGCACGGAAGGAGCGGTGTC
Downstream 100 bases:
>100_bases CTCGACTCCAGCGCTCGCTGCGCGTCCGTGACAGGGCAGGCGGCTGGTCTTCAGGCCGCCCGCCGCCACCGCTTCATGTG GCGTGGTGGGTGGAACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA 2 [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSRPIPSLAADDHILGTPSFSVTLVEYGDYQCPYCGEAYPVLKAVQRAMGADLRFVFRNFPLVEVHAHALRAAQFAEAAA EAGLFWEAHDMLYENQDALGDRHLEAYADQLGIDRAILAAAFEGRHDEKIQRDFLGGVRGGVNGTPSLFINGQLYEGPPE PESLISVLSRAATTRV
Sequences:
>Translated_176_residues MSRPIPSLAADDHILGTPSFSVTLVEYGDYQCPYCGEAYPVLKAVQRAMGADLRFVFRNFPLVEVHAHALRAAQFAEAAA EAGLFWEAHDMLYENQDALGDRHLEAYADQLGIDRAILAAAFEGRHDEKIQRDFLGGVRGGVNGTPSLFINGQLYEGPPE PESLISVLSRAATTRV >Mature_175_residues SRPIPSLAADDHILGTPSFSVTLVEYGDYQCPYCGEAYPVLKAVQRAMGADLRFVFRNFPLVEVHAHALRAAQFAEAAAE AGLFWEAHDMLYENQDALGDRHLEAYADQLGIDRAILAAAFEGRHDEKIQRDFLGGVRGGVNGTPSLFINGQLYEGPPEP ESLISVLSRAATTRV
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 19248; Mature: 19117
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPIPSLAADDHILGTPSFSVTLVEYGDYQCPYCGEAYPVLKAVQRAMGADLRFVFRNF CCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCC PLVEVHAHALRAAQFAEAAAEAGLFWEAHDMLYENQDALGDRHLEAYADQLGIDRAILAA CCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH AFEGRHDEKIQRDFLGGVRGGVNGTPSLFINGQLYEGPPEPESLISVLSRAATTRV HHCCCCHHHHHHHHHHHHCCCCCCCCCEEECCEEECCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SRPIPSLAADDHILGTPSFSVTLVEYGDYQCPYCGEAYPVLKAVQRAMGADLRFVFRNF CCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCC PLVEVHAHALRAAQFAEAAAEAGLFWEAHDMLYENQDALGDRHLEAYADQLGIDRAILAA CCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH AFEGRHDEKIQRDFLGGVRGGVNGTPSLFINGQLYEGPPEPESLISVLSRAATTRV HHCCCCHHHHHHHHHHHHCCCCCCCCCEEECCEEECCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA