| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422965
Identifier: 158422965
GI number: 158422965
Start: 1504203
End: 1506923
Strand: Direct
Name: 158422965
Synonym: AZC_1341
Alternate gene names: NA
Gene position: 1504203-1506923 (Clockwise)
Preceding gene: 158422964
Following gene: 158422966
Centisome position: 28.01
GC content: 63.62
Gene sequence:
>2721_bases ATGGCTCATCGGCTGGACCGCCGCCTATGCGCTGTTGCTGCAGCTTGTCCTGATCGGCGCACTGATGCCGGTCAACGCCC ATGCCTTGCCCGGCGCCGAAATCCCCATCTGTGGCACGTTTTCCATTTCCGATGCAGACGGGGCTGTACCCGACGACCAG CGCGTCGCGGTGCATTGTCCGCTTTGCCTCGCACGCGCCGATGCGGTGATCCTGCCGTCCCCCCCGTCCGTGGCGCAGGT CGCGCGGCGCACGCAGGCGCCGCATTATCAGTCGGTTTCGAAGCCCTGGCGGTTCGCGCGTCCGGCGCGCAGGCCCTCTC AACCCCGCGCGCCTCCACTCCAGGCCTGAGCTTTGCCGCGCCTGCCGCGCGGCCCCGTCACCCATTCCTGCCGCGGCACC GATGCCGTCCCGCGCCCGCGCGCCGTCATGGTCGCGCGTCGTCGGGTCATGCTCAAATTCCTGGATTTCTTCCCATGAAC GCTCATTCCCTCCTGCGTTTTCGTGATCAATTGCGTCACAGCAGTGCTATGACATCCCCCGCGCTCATTGCGCTCTTCGG CGGGCTGATGATGGCGTCGGCCAGCGCCCAATCCGCCGGCAAGCCGGTGAGCAACAGCCTGCCCACGGTCGTGGTGACCG CCTCGCAACCGGACTGGGGCGCCAATGAGGGCGCGGGCGAAAACCTCTTCCTGCCGCTGGACACCTCGACGATCACCAGC ATCATGGCCCGAACGGCCGCGCTTTCCACGAGCGACAGCGGTGCCTTGCTGACCGGCGTGCCCGGCGGCGCGGCCTGGGG CGCGGGTGGAGTCTCCAGCCTTCCGGCCATCAACGGCATGGGCGCCGACCGGGTGCAGATCGACATCAACGGCATGACCT ATGGTGTCGCCTGTCCGAACGAGATGAACCCGCCGCTGTCCTTCGTGAACCCGGCGATGATCTCCAACATGACCGTCTTC ACCGCCACATCGCCGGTGAGCGTCGGCGGCGACTACACCGGCGCCAAGGTGAAGGTCGAGGTCGCGCAGCCCAAGTTCAC GCCGGGCCAGCAGATCACCACCAGCGGCAGTGTCTCGGGCTACTACCGCAGCAACGGCAATGGCTACGGCACGGACGTGA CCGCCACCATGTCCAACGAGGACACGAACGTGACCTATACGGGCGGATGGGCGCGGGCGAGCGACTATACCTCGGGCAAC GGCACCACCATCAAGTCCACCATGTACGAGACGCAGAACCATGCGGTGAGCATCTCGAAGCGGGACGCCAGCAACCTGTT CACGCTGCAACTCGGAGGCCAGTTCATTCCCTATGAGAGCTACGTCAACCAGTACATGGATCTGGTCGACAACCGCTCCT TCTTCATCAACGGGAATTACGAAGGCCGGTTCGAGTGGGGCAGGCTGGAGGCCAGCGCCTTCTTCAGCCGGGTCCGGCAC ACCATGGGCTTCATCCAGCCGGACAAGACCGGCGACATGCCCATGGACACGCGCACCAGCAATCTCGGCTACAATATCCG CGCAACCATCGACGTCTCGCCGCACGATCTGGTCAGGGTCGGCAACGAGCTCGTCTACAACACGCTCGATGACTGGTGGC CGCCCGTTGCCGGCTCCAGCATGATGGGCCCCGACACCTTCATCAACATCAACAATGGCCAGCGCACGCGCATCGGAACC TATGCCGAGTGGGAGCGGCACTTCAACGATCAATGGACCGGCATCATCGGGGTGCGGAACGACATCGTCTGGATGAACAC CGGCGACGTGCAGGGCTACAATGCGATGATGTACGGGGCGAACGCAGCGGCGTTCAACGCCCTCGATCACGCCCGCACCG ACATCAATTTCGATGGCTCGGCGATCCTGCGCTACACCCCGAACGCCATGAGCTCTTACGAGCTGGGCCTCGCCCGCAAG ACGCGCTCACCGAATTTCTACGAGCGCTATGCCTGGTCCACCAATGCCATGGCCATGCAGATGATCGGCTGGTTCGGCGA CGGCAACGGCTATCTGGGCAATATCGACCTCGTGCCGGAGAAGGCCCATACGGTGAGCTTCACCGCCAGCTGGCATGACG CGGCCCAGAAGGTCTGGGAAGTGCGCGTGTCGCCTTACTACAGCTATGTACAGGACTACATCGACGTGGATCGCTGCGCG CTCGCCGGGTGCCTGTCGAACCTCGCCAGCAATCTCACCACCACCAACAACTTCGTCTTTTTGCAGTTCGCCAACCATGA CGCCTGGCTCTACGGCATCAACATCGACGGCAAGCTCGCACTGTGGGATGGCCCGGTCTACGGCCGAGGCGTCCTGCGCG GCAACGTGAACTTCGTGCGCGGCCAGAGAACCGACGGTGTCGATCTGTATCACATCATGCCGGTCAACGGCACGGTGGGG CTGGACCACACCATCGGCAACTGGACCAACAGCCTCGAAGTGCAGATGGTCGGCGCCAAGACGCAGGTCAGCGAAGTGCG CAACGAGACCGAAACCTCCGCTTATGCCCTGCTCAATTTCCGCACGGCTTATGAGTGGAATGCGGTCCGTATCCAGTTCG GCATCGATAACATCCTGGACACCGAATACGACCTCCCGCTGGGCGGGGCCAATCTGGTGAATTACCAGCAGGTATCGATG ATGGGGTCGTCGTCCGTCTGGGGTTATGGCGTTGCCGGCCCCGGCCGCTCGGTGAATACGCGCGTCACCGTCAAATTCTG A
Upstream 100 bases:
>100_bases GGATCAATATTTCCAGTCTGCTTCCGGGCATGTTATTCGGTCGAGCACTGGGGGATTCTGAAATGCTGCGGACCGTGAGA TCCGCAAATCGCAGCGCGCA
Downstream 100 bases:
>100_bases TCGACCCGCGGGCGCGGCTCCCTCGCGCCCGCACCTCGCTGGCGCCGCCCGGAGGCGCCTGGCCATGCTTCCGGCGCCTG CTTAATTGCCTTTCCAGTGA
Product: TonB dependent receptor
Products: NA
Alternate protein names: NB Dependent Receptor; NB-Dependent Receptor Protein; NB-Dependent Receptor Domain Protein; Outer Membrane Protein; NB-Dependent Receptor Plug; Outer Membrane Receptor Protein; IMP Dehydrogenase/GMP Reductase; Outer Membrane Protein NosA; NB-Dependent Copper Receptor Protein; Iron Complex Outermembrane Recepter Protein; Nb-Dependent Receptor; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 906; Mature: 905
Protein sequence:
>906_residues MAHRLDRRLCAVAAACPDRRTDAGQRPCLARRRNPHLWHVFHFRCRRGCTRRPARRGALSALPRTRRCGDPAVPPVRGAG RAAHAGAALSVGFEALAVRASGAQALSTPRASTPGLSFAAPAARPRHPFLPRHRCRPAPARRHGRASSGHAQIPGFLPMN AHSLLRFRDQLRHSSAMTSPALIALFGGLMMASASAQSAGKPVSNSLPTVVVTASQPDWGANEGAGENLFLPLDTSTITS IMARTAALSTSDSGALLTGVPGGAAWGAGGVSSLPAINGMGADRVQIDINGMTYGVACPNEMNPPLSFVNPAMISNMTVF TATSPVSVGGDYTGAKVKVEVAQPKFTPGQQITTSGSVSGYYRSNGNGYGTDVTATMSNEDTNVTYTGGWARASDYTSGN GTTIKSTMYETQNHAVSISKRDASNLFTLQLGGQFIPYESYVNQYMDLVDNRSFFINGNYEGRFEWGRLEASAFFSRVRH TMGFIQPDKTGDMPMDTRTSNLGYNIRATIDVSPHDLVRVGNELVYNTLDDWWPPVAGSSMMGPDTFININNGQRTRIGT YAEWERHFNDQWTGIIGVRNDIVWMNTGDVQGYNAMMYGANAAAFNALDHARTDINFDGSAILRYTPNAMSSYELGLARK TRSPNFYERYAWSTNAMAMQMIGWFGDGNGYLGNIDLVPEKAHTVSFTASWHDAAQKVWEVRVSPYYSYVQDYIDVDRCA LAGCLSNLASNLTTTNNFVFLQFANHDAWLYGINIDGKLALWDGPVYGRGVLRGNVNFVRGQRTDGVDLYHIMPVNGTVG LDHTIGNWTNSLEVQMVGAKTQVSEVRNETETSAYALLNFRTAYEWNAVRIQFGIDNILDTEYDLPLGGANLVNYQQVSM MGSSSVWGYGVAGPGRSVNTRVTVKF
Sequences:
>Translated_906_residues MAHRLDRRLCAVAAACPDRRTDAGQRPCLARRRNPHLWHVFHFRCRRGCTRRPARRGALSALPRTRRCGDPAVPPVRGAG RAAHAGAALSVGFEALAVRASGAQALSTPRASTPGLSFAAPAARPRHPFLPRHRCRPAPARRHGRASSGHAQIPGFLPMN AHSLLRFRDQLRHSSAMTSPALIALFGGLMMASASAQSAGKPVSNSLPTVVVTASQPDWGANEGAGENLFLPLDTSTITS IMARTAALSTSDSGALLTGVPGGAAWGAGGVSSLPAINGMGADRVQIDINGMTYGVACPNEMNPPLSFVNPAMISNMTVF TATSPVSVGGDYTGAKVKVEVAQPKFTPGQQITTSGSVSGYYRSNGNGYGTDVTATMSNEDTNVTYTGGWARASDYTSGN GTTIKSTMYETQNHAVSISKRDASNLFTLQLGGQFIPYESYVNQYMDLVDNRSFFINGNYEGRFEWGRLEASAFFSRVRH TMGFIQPDKTGDMPMDTRTSNLGYNIRATIDVSPHDLVRVGNELVYNTLDDWWPPVAGSSMMGPDTFININNGQRTRIGT YAEWERHFNDQWTGIIGVRNDIVWMNTGDVQGYNAMMYGANAAAFNALDHARTDINFDGSAILRYTPNAMSSYELGLARK TRSPNFYERYAWSTNAMAMQMIGWFGDGNGYLGNIDLVPEKAHTVSFTASWHDAAQKVWEVRVSPYYSYVQDYIDVDRCA LAGCLSNLASNLTTTNNFVFLQFANHDAWLYGINIDGKLALWDGPVYGRGVLRGNVNFVRGQRTDGVDLYHIMPVNGTVG LDHTIGNWTNSLEVQMVGAKTQVSEVRNETETSAYALLNFRTAYEWNAVRIQFGIDNILDTEYDLPLGGANLVNYQQVSM MGSSSVWGYGVAGPGRSVNTRVTVKF >Mature_905_residues AHRLDRRLCAVAAACPDRRTDAGQRPCLARRRNPHLWHVFHFRCRRGCTRRPARRGALSALPRTRRCGDPAVPPVRGAGR AAHAGAALSVGFEALAVRASGAQALSTPRASTPGLSFAAPAARPRHPFLPRHRCRPAPARRHGRASSGHAQIPGFLPMNA HSLLRFRDQLRHSSAMTSPALIALFGGLMMASASAQSAGKPVSNSLPTVVVTASQPDWGANEGAGENLFLPLDTSTITSI MARTAALSTSDSGALLTGVPGGAAWGAGGVSSLPAINGMGADRVQIDINGMTYGVACPNEMNPPLSFVNPAMISNMTVFT ATSPVSVGGDYTGAKVKVEVAQPKFTPGQQITTSGSVSGYYRSNGNGYGTDVTATMSNEDTNVTYTGGWARASDYTSGNG TTIKSTMYETQNHAVSISKRDASNLFTLQLGGQFIPYESYVNQYMDLVDNRSFFINGNYEGRFEWGRLEASAFFSRVRHT MGFIQPDKTGDMPMDTRTSNLGYNIRATIDVSPHDLVRVGNELVYNTLDDWWPPVAGSSMMGPDTFININNGQRTRIGTY AEWERHFNDQWTGIIGVRNDIVWMNTGDVQGYNAMMYGANAAAFNALDHARTDINFDGSAILRYTPNAMSSYELGLARKT RSPNFYERYAWSTNAMAMQMIGWFGDGNGYLGNIDLVPEKAHTVSFTASWHDAAQKVWEVRVSPYYSYVQDYIDVDRCAL AGCLSNLASNLTTTNNFVFLQFANHDAWLYGINIDGKLALWDGPVYGRGVLRGNVNFVRGQRTDGVDLYHIMPVNGTVGL DHTIGNWTNSLEVQMVGAKTQVSEVRNETETSAYALLNFRTAYEWNAVRIQFGIDNILDTEYDLPLGGANLVNYQQVSMM GSSSVWGYGVAGPGRSVNTRVTVKF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98554; Mature: 98423
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRLDRRLCAVAAACPDRRTDAGQRPCLARRRNPHLWHVFHFRCRRGCTRRPARRGALS CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEHHHHHCCCCCCCHHHHHHH ALPRTRRCGDPAVPPVRGAGRAAHAGAALSVGFEALAVRASGAQALSTPRASTPGLSFAA HCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCHHHCCCCCCCCCCCCCC PAARPRHPFLPRHRCRPAPARRHGRASSGHAQIPGFLPMNAHSLLRFRDQLRHSSAMTSP CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCC ALIALFGGLMMASASAQSAGKPVSNSLPTVVVTASQPDWGANEGAGENLFLPLDTSTITS HHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECHHHHHH IMARTAALSTSDSGALLTGVPGGAAWGAGGVSSLPAINGMGADRVQIDINGMTYGVACPN HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCC EMNPPLSFVNPAMISNMTVFTATSPVSVGGDYTGAKVKVEVAQPKFTPGQQITTSGSVSG CCCCCHHHCCHHHHCCEEEEEECCCEECCCCCCCCEEEEEEECCCCCCCCEEECCCCCCE YYRSNGNGYGTDVTATMSNEDTNVTYTGGWARASDYTSGNGTTIKSTMYETQNHAVSISK EEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEC RDASNLFTLQLGGQFIPYESYVNQYMDLVDNRSFFINGNYEGRFEWGRLEASAFFSRVRH CCCCCEEEEEECCEECCHHHHHHHHHHHHCCCEEEEECCCCCEEEECEECHHHHHHHHHH TMGFIQPDKTGDMPMDTRTSNLGYNIRATIDVSPHDLVRVGNELVYNTLDDWWPPVAGSS HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHCHHHHHHCHHHHCCCCCCCC MMGPDTFININNGQRTRIGTYAEWERHFNDQWTGIIGVRNDIVWMNTGDVQGYNAMMYGA CCCCCEEEECCCCCCEEECCHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCEEEEECC NAAAFNALDHARTDINFDGSAILRYTPNAMSSYELGLARKTRSPNFYERYAWSTNAMAMQ CHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCHHHHHCCCCCCEEEE MIGWFGDGNGYLGNIDLVPEKAHTVSFTASWHDAAQKVWEVRVSPYYSYVQDYIDVDRCA EEEEEECCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHEEECCHHHHHHHHHHHHHHHH LAGCLSNLASNLTTTNNFVFLQFANHDAWLYGINIDGKLALWDGPVYGRGVLRGNVNFVR HHHHHHHHHHCCEECCCEEEEEEECCCEEEEEEECCCEEEEECCCCCCCEEEECCCEEEE GQRTDGVDLYHIMPVNGTVGLDHTIGNWTNSLEVQMVGAKTQVSEVRNETETSAYALLNF CCCCCCEEEEEEEECCCCEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEE RTAYEWNAVRIQFGIDNILDTEYDLPLGGANLVNYQQVSMMGSSSVWGYGVAGPGRSVNT EEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCC RVTVKF EEEEEC >Mature Secondary Structure AHRLDRRLCAVAAACPDRRTDAGQRPCLARRRNPHLWHVFHFRCRRGCTRRPARRGALS CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEHHHHHCCCCCCCHHHHHHH ALPRTRRCGDPAVPPVRGAGRAAHAGAALSVGFEALAVRASGAQALSTPRASTPGLSFAA HCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCHHHCCCCCCCCCCCCCC PAARPRHPFLPRHRCRPAPARRHGRASSGHAQIPGFLPMNAHSLLRFRDQLRHSSAMTSP CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCC ALIALFGGLMMASASAQSAGKPVSNSLPTVVVTASQPDWGANEGAGENLFLPLDTSTITS HHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECHHHHHH IMARTAALSTSDSGALLTGVPGGAAWGAGGVSSLPAINGMGADRVQIDINGMTYGVACPN HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCC EMNPPLSFVNPAMISNMTVFTATSPVSVGGDYTGAKVKVEVAQPKFTPGQQITTSGSVSG CCCCCHHHCCHHHHCCEEEEEECCCEECCCCCCCCEEEEEEECCCCCCCCEEECCCCCCE YYRSNGNGYGTDVTATMSNEDTNVTYTGGWARASDYTSGNGTTIKSTMYETQNHAVSISK EEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEC RDASNLFTLQLGGQFIPYESYVNQYMDLVDNRSFFINGNYEGRFEWGRLEASAFFSRVRH CCCCCEEEEEECCEECCHHHHHHHHHHHHCCCEEEEECCCCCEEEECEECHHHHHHHHHH TMGFIQPDKTGDMPMDTRTSNLGYNIRATIDVSPHDLVRVGNELVYNTLDDWWPPVAGSS HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHCHHHHHHCHHHHCCCCCCCC MMGPDTFININNGQRTRIGTYAEWERHFNDQWTGIIGVRNDIVWMNTGDVQGYNAMMYGA CCCCCEEEECCCCCCEEECCHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCEEEEECC NAAAFNALDHARTDINFDGSAILRYTPNAMSSYELGLARKTRSPNFYERYAWSTNAMAMQ CHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCHHHHHCCCCCCEEEE MIGWFGDGNGYLGNIDLVPEKAHTVSFTASWHDAAQKVWEVRVSPYYSYVQDYIDVDRCA EEEEEECCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHEEECCHHHHHHHHHHHHHHHH LAGCLSNLASNLTTTNNFVFLQFANHDAWLYGINIDGKLALWDGPVYGRGVLRGNVNFVR HHHHHHHHHHCCEECCCEEEEEEECCCEEEEEEECCCEEEEECCCCCCCEEEECCCEEEE GQRTDGVDLYHIMPVNGTVGLDHTIGNWTNSLEVQMVGAKTQVSEVRNETETSAYALLNF CCCCCCEEEEEEEECCCCEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEE RTAYEWNAVRIQFGIDNILDTEYDLPLGGANLVNYQQVSMMGSSSVWGYGVAGPGRSVNT EEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCC RVTVKF EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA