| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is iutA [H]
Identifier: 158422952
GI number: 158422952
Start: 1488084
End: 1490354
Strand: Direct
Name: iutA [H]
Synonym: AZC_1328
Alternate gene names: 158422952
Gene position: 1488084-1490354 (Clockwise)
Preceding gene: 158422948
Following gene: 158422953
Centisome position: 27.71
GC content: 63.63
Gene sequence:
>2271_bases ATGACGTATGATCGCCGCGCCCGTTTGTTGACGATGACCAGTGTCCTCTCCCTGGCTGTCGCTCTCGCCTCTCCGGTCCT CGCCCAGACGGCAACGCCGGCCCGGCCCGTGACGAGCGGCGGGGAGACGATCGACCTCGATACGGTCACGGTAACCGCGA CGCGCGCGGACCGGCCGATCAGCGATGTGCCCCAGACCGTGCGGGTGATCGAGCGCTCCGAGATCGAGCAGCAGTTACAG CTCACCAACAATCCGGCGGCCGTGCTGGCCAAGCTCGTTCCCGGCTACAGTGTGTCCACACAGACCATCTCGGGCGCCTC GGAGACCTTCCGCGGTCGCGATCTGCTGGTCATGATCGACGGCGTGCCCATGAACACGCCCCTGCGCAACGTCTCGCGCC TTCTGGCGCTGATCGATCTGAATTCGGTGGAGCGCATCGAGGTGGTGGCTGGCGCTTCCAGCACCTATGGCGCGGGTGCG ACCGGCGGTACGGTCAACTTCATCACCAAGCGGCCCACGGAGGGCGCGCCGAAGGCATCGGTCAATGCGGCCTTGCGGAC CTTCACCGCCAATCCCGGCGCGTCGCTTGCTCCGGAGGTTTCGGGGACGGTCTCCGGCGGCGTGAAGGGTGGCGTCGATT ATCTGGTCACCGCCACCGGCTCCTTCGCCAACAACACCTATGATGGCGACGGCCGCCTGCTACCCTCGGACGGCATGCTG GGACAGGGCGGCGGCGGCGAATATGGCCGCGGCAATTTCCTCGGCAAGATCGGCTACAACATCGATCCCACCAAGCGGAT CGAGGCGCAGGCCAGCTGGATCTATATGCAGCAGGATCCCAAATGGGCGACCAGCTATGCGGGCGCCTATGCCGCCCCGG CCATCGGCACGCCTTACACCGGCCAGTCCGTGCTGGAGGATTCCAAGTCCGTGTCGCTGCGCTATACGGACAGCGCGTTC GCCCTCGGTTCGCTCTCGATGCTGGGCTATTACAACGACATCAAGAAGCGCTTCAATTACAGCAGCTTCGACATCCGGAA CAATTATCTGGTCTATTATTCGGGTAATCTCAGCAGCCCGACGTCGCCCTACAACCAGACCATCCTCAATTCCGAGCGCG GCGGCGTGAACATCACGGTGGATACGCCCCTGCCCATCCTGAACGGCGCCACACTGACCTGGGGGGCTGACGTGGTGCAT GACGACACGTGGCAGACCCTGACCAACGGCGAGAACGTCTTCACGCCGCTTTCCCAGATGACCTATGCGGGGTTTGCCCA GTTGCAGGTGCCCATCGGCGAACGGCTGGTGGTGCGCGGTGGCGTCCGCTATGAATATCTCGACGTCACGGTCAACGACT TCACCCGTCCGGCCGCTTTCCTCGGCTTCTCCGGCCTCGGCTATGCGGTGCTCCCCGCCATGGCCGTGACGGGCGGAACC TATGACTACTCCGCCCCCACCTTCAATCTCGGCGCCACCTACAAGCTGACCGAGACGGTCGATCTCTATGGTGGCTTCAG CCAGGGCTTTGCCCTGCCGGACATCGGCGCCTTTACGAGGCGCGCCGGGGCTTCGGGAACCACCCAGATCCTGCAATACG GCTGTTTCCTCGGCACCCGCCTGCCGGCCGGGCCCTACACCTGCAACAAGCGCAACACCATCAGCTATGACGATCTGGGT GTCGAAGCGCAGATCGTGAACAATTACGAGATCGGCGTACGGGGCAGCATCGGTGCCTTCAAGGGCAGCCTCGCCGGCTT CTATTCCACTTCCAACGAGGGCGTGAACTTCATCGCGTCCACCAACGCCATCGGTCAGTCCAAGGAAATCATCTACGGCG CCGAATTCACCGGCGAATATGCCTTCACCCCGAATTTCGCGCTCGGCACCAATCTCGCTTTGCGCGAGGGGCGGTGGGAT TCCAATGGCGACGGCACCATCGATGCCTGGCTGCCGAACAACCGCATCTCCACGCCATTCCGAGGCACGGTCTACGGCAA TTACCGCTTCGACCAGGGCACCACGGTGCGGGCCGAGGTCGAGTTCTGGAGCGGACGCGGCAAGTTTGATGGCACGCAGC TGTTCGAGATCCAGTCGGGCGCCACGCTCAACCTGGCCGTCGCCCATCCTCTGGCAGGCGGCACCGTCTATGTCTCCGCC GACAATCTGCTCGACAGCGCCTATGTGAATCCGTCCGCCACCGCCACCCGCAATTATGACGTGTACGGCTGGGGGCGCAC GCTCACAGTCGGCTTCAGCAAGACCTTCTGA
Upstream 100 bases:
>100_bases CCAAGCGCTGCGATCGGGATGAATTTATCACCTTTCATCCAGGGTTCATTCTCCGCTTCCTCTCCGGGAGAGGCGGACCA GATCAGAATAGTTCCAGAAA
Downstream 100 bases:
>100_bases CGCCATGGTGAGCCTCGACATGGAGGACGGCGACATGGCCGTCCTGCGCTTCCTCCCGCCCTACGGGCCGCAGGACGAAG CCCACTATCTGGCGGCGCTG
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 756; Mature: 755
Protein sequence:
>756_residues MTYDRRARLLTMTSVLSLAVALASPVLAQTATPARPVTSGGETIDLDTVTVTATRADRPISDVPQTVRVIERSEIEQQLQ LTNNPAAVLAKLVPGYSVSTQTISGASETFRGRDLLVMIDGVPMNTPLRNVSRLLALIDLNSVERIEVVAGASSTYGAGA TGGTVNFITKRPTEGAPKASVNAALRTFTANPGASLAPEVSGTVSGGVKGGVDYLVTATGSFANNTYDGDGRLLPSDGML GQGGGGEYGRGNFLGKIGYNIDPTKRIEAQASWIYMQQDPKWATSYAGAYAAPAIGTPYTGQSVLEDSKSVSLRYTDSAF ALGSLSMLGYYNDIKKRFNYSSFDIRNNYLVYYSGNLSSPTSPYNQTILNSERGGVNITVDTPLPILNGATLTWGADVVH DDTWQTLTNGENVFTPLSQMTYAGFAQLQVPIGERLVVRGGVRYEYLDVTVNDFTRPAAFLGFSGLGYAVLPAMAVTGGT YDYSAPTFNLGATYKLTETVDLYGGFSQGFALPDIGAFTRRAGASGTTQILQYGCFLGTRLPAGPYTCNKRNTISYDDLG VEAQIVNNYEIGVRGSIGAFKGSLAGFYSTSNEGVNFIASTNAIGQSKEIIYGAEFTGEYAFTPNFALGTNLALREGRWD SNGDGTIDAWLPNNRISTPFRGTVYGNYRFDQGTTVRAEVEFWSGRGKFDGTQLFEIQSGATLNLAVAHPLAGGTVYVSA DNLLDSAYVNPSATATRNYDVYGWGRTLTVGFSKTF
Sequences:
>Translated_756_residues MTYDRRARLLTMTSVLSLAVALASPVLAQTATPARPVTSGGETIDLDTVTVTATRADRPISDVPQTVRVIERSEIEQQLQ LTNNPAAVLAKLVPGYSVSTQTISGASETFRGRDLLVMIDGVPMNTPLRNVSRLLALIDLNSVERIEVVAGASSTYGAGA TGGTVNFITKRPTEGAPKASVNAALRTFTANPGASLAPEVSGTVSGGVKGGVDYLVTATGSFANNTYDGDGRLLPSDGML GQGGGGEYGRGNFLGKIGYNIDPTKRIEAQASWIYMQQDPKWATSYAGAYAAPAIGTPYTGQSVLEDSKSVSLRYTDSAF ALGSLSMLGYYNDIKKRFNYSSFDIRNNYLVYYSGNLSSPTSPYNQTILNSERGGVNITVDTPLPILNGATLTWGADVVH DDTWQTLTNGENVFTPLSQMTYAGFAQLQVPIGERLVVRGGVRYEYLDVTVNDFTRPAAFLGFSGLGYAVLPAMAVTGGT YDYSAPTFNLGATYKLTETVDLYGGFSQGFALPDIGAFTRRAGASGTTQILQYGCFLGTRLPAGPYTCNKRNTISYDDLG VEAQIVNNYEIGVRGSIGAFKGSLAGFYSTSNEGVNFIASTNAIGQSKEIIYGAEFTGEYAFTPNFALGTNLALREGRWD SNGDGTIDAWLPNNRISTPFRGTVYGNYRFDQGTTVRAEVEFWSGRGKFDGTQLFEIQSGATLNLAVAHPLAGGTVYVSA DNLLDSAYVNPSATATRNYDVYGWGRTLTVGFSKTF >Mature_755_residues TYDRRARLLTMTSVLSLAVALASPVLAQTATPARPVTSGGETIDLDTVTVTATRADRPISDVPQTVRVIERSEIEQQLQL TNNPAAVLAKLVPGYSVSTQTISGASETFRGRDLLVMIDGVPMNTPLRNVSRLLALIDLNSVERIEVVAGASSTYGAGAT GGTVNFITKRPTEGAPKASVNAALRTFTANPGASLAPEVSGTVSGGVKGGVDYLVTATGSFANNTYDGDGRLLPSDGMLG QGGGGEYGRGNFLGKIGYNIDPTKRIEAQASWIYMQQDPKWATSYAGAYAAPAIGTPYTGQSVLEDSKSVSLRYTDSAFA LGSLSMLGYYNDIKKRFNYSSFDIRNNYLVYYSGNLSSPTSPYNQTILNSERGGVNITVDTPLPILNGATLTWGADVVHD DTWQTLTNGENVFTPLSQMTYAGFAQLQVPIGERLVVRGGVRYEYLDVTVNDFTRPAAFLGFSGLGYAVLPAMAVTGGTY DYSAPTFNLGATYKLTETVDLYGGFSQGFALPDIGAFTRRAGASGTTQILQYGCFLGTRLPAGPYTCNKRNTISYDDLGV EAQIVNNYEIGVRGSIGAFKGSLAGFYSTSNEGVNFIASTNAIGQSKEIIYGAEFTGEYAFTPNFALGTNLALREGRWDS NGDGTIDAWLPNNRISTPFRGTVYGNYRFDQGTTVRAEVEFWSGRGKFDGTQLFEIQSGATLNLAVAHPLAGGTVYVSAD NLLDSAYVNPSATATRNYDVYGWGRTLTVGFSKTF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=160, Percent_Identity=34.375, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80639; Mature: 80508
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDRRARLLTMTSVLSLAVALASPVLAQTATPARPVTSGGETIDLDTVTVTATRADRPI CCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCH SDVPQTVRVIERSEIEQQLQLTNNPAAVLAKLVPGYSVSTQTISGASETFRGRDLLVMID HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEECCCHHHCCCCEEEEEEC GVPMNTPLRNVSRLLALIDLNSVERIEVVAGASSTYGAGATGGTVNFITKRPTEGAPKAS CCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCH VNAALRTFTANPGASLAPEVSGTVSGGVKGGVDYLVTATGSFANNTYDGDGRLLPSDGML HCEEEEEEECCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCEECCCCEECCCCCCE GQGGGGEYGRGNFLGKIGYNIDPTKRIEAQASWIYMQQDPKWATSYAGAYAAPAIGTPYT ECCCCCCCCCCCEEEEECCCCCCCHHEECEEEEEEEECCCCHHHHCCCCCCCCCCCCCCC GQSVLEDSKSVSLRYTDSAFALGSLSMLGYYNDIKKRFNYSSFDIRNNYLVYYSGNLSSP CHHHHCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCC TSPYNQTILNSERGGVNITVDTPLPILNGATLTWGADVVHDDTWQTLTNGENVFTPLSQM CCCCHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCEEECCCHHHHCCCCCEECCHHHH TYAGFAQLQVPIGERLVVRGGVRYEYLDVTVNDFTRPAAFLGFSGLGYAVLPAMAVTGGT HHCCEEEEEECCCCEEEEECCCEEEEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCC YDYSAPTFNLGATYKLTETVDLYGGFSQGFALPDIGAFTRRAGASGTTQILQYGCFLGTR EECCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCC LPAGPYTCNKRNTISYDDLGVEAQIVNNYEIGVRGSIGAFKGSLAGFYSTSNEGVNFIAS CCCCCEECCCCCCCCCCCCCCEEEEECCEEEEEECCCCHHCCCCEEEEECCCCCEEEEEE TNAIGQSKEIIYGAEFTGEYAFTPNFALGTNLALREGRWDSNGDGTIDAWLPNNRISTPF CCCCCCCCEEEEEEEECCCEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCC RGTVYGNYRFDQGTTVRAEVEFWSGRGKFDGTQLFEIQSGATLNLAVAHPLAGGTVYVSA CEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEE DNLLDSAYVNPSATATRNYDVYGWGRTLTVGFSKTF CCCCHHCCCCCCCCCCCCEEEEECCEEEEEEEECCC >Mature Secondary Structure TYDRRARLLTMTSVLSLAVALASPVLAQTATPARPVTSGGETIDLDTVTVTATRADRPI CCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCH SDVPQTVRVIERSEIEQQLQLTNNPAAVLAKLVPGYSVSTQTISGASETFRGRDLLVMID HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEECCCHHHCCCCEEEEEEC GVPMNTPLRNVSRLLALIDLNSVERIEVVAGASSTYGAGATGGTVNFITKRPTEGAPKAS CCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCH VNAALRTFTANPGASLAPEVSGTVSGGVKGGVDYLVTATGSFANNTYDGDGRLLPSDGML HCEEEEEEECCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCEECCCCEECCCCCCE GQGGGGEYGRGNFLGKIGYNIDPTKRIEAQASWIYMQQDPKWATSYAGAYAAPAIGTPYT ECCCCCCCCCCCEEEEECCCCCCCHHEECEEEEEEEECCCCHHHHCCCCCCCCCCCCCCC GQSVLEDSKSVSLRYTDSAFALGSLSMLGYYNDIKKRFNYSSFDIRNNYLVYYSGNLSSP CHHHHCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCC TSPYNQTILNSERGGVNITVDTPLPILNGATLTWGADVVHDDTWQTLTNGENVFTPLSQM CCCCHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCEEECCCHHHHCCCCCEECCHHHH TYAGFAQLQVPIGERLVVRGGVRYEYLDVTVNDFTRPAAFLGFSGLGYAVLPAMAVTGGT HHCCEEEEEECCCCEEEEECCCEEEEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCC YDYSAPTFNLGATYKLTETVDLYGGFSQGFALPDIGAFTRRAGASGTTQILQYGCFLGTR EECCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCC LPAGPYTCNKRNTISYDDLGVEAQIVNNYEIGVRGSIGAFKGSLAGFYSTSNEGVNFIAS CCCCCEECCCCCCCCCCCCCCEEEEECCEEEEEECCCCHHCCCCEEEEECCCCCEEEEEE TNAIGQSKEIIYGAEFTGEYAFTPNFALGTNLALREGRWDSNGDGTIDAWLPNNRISTPF CCCCCCCCEEEEEEEECCCEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCC RGTVYGNYRFDQGTTVRAEVEFWSGRGKFDGTQLFEIQSGATLNLAVAHPLAGGTVYVSA CEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEE DNLLDSAYVNPSATATRNYDVYGWGRTLTVGFSKTF CCCCHHCCCCCCCCCCCCEEEEECCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA