| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is pcaD [H]
Identifier: 158422945
GI number: 158422945
Start: 1479758
End: 1480567
Strand: Reverse
Name: pcaD [H]
Synonym: AZC_1321
Alternate gene names: 158422945
Gene position: 1480567-1479758 (Counterclockwise)
Preceding gene: 158422946
Following gene: 158422944
Centisome position: 27.57
GC content: 69.75
Gene sequence:
>810_bases ATGCCCCGAGCCAACCCCAACAGCATCGAGATCGACGGACTGACCTTCCATTACCGGGTGGACGGCCCCGAGGGCGCGCA CTGGCTGGTGTTCAGCAATTCCCTTATGACCGACCTGTCCCTATGGGACGATCAGGCGGCCGCGTTCGGGGAAAGCTTCC GCATCCTGCGCTATGACCAGCGGGGTCACGGGCGGACGGGCATCCCGGCCGAAGACTGCACCATGGAGCGTCTTGCCGCC GATCTGATCGGCCTCATGGATGCACTCGGCATCGCGCGCACCCATCTCGTCGGCATCTCCATGGGCGCCGCGACATGTCT CGGTGCGGCCCTCGCGCAGCCTCGGCGCGTGGCCAGCCTCGTGATGGCGGACGGTCAGGCGGCGACACCGACGGGTGGCG CACAAGCGTGGGAGGAGCGGATCGCCCTCGCCCGCACCCAAGGCATGGCCGGGCTCGCGGACCCCACCATCGCGCGCTGG TTCCAGCCCGCCAGCGTCGAGACGAACGGAGAGGGTGTCCGCCGCGTGGCGGGCATGATAGCGGCGACGCCCCTCGACGG CTTCCTGCGCGCGGTGCGCGCGCTCCAACGCTTCGATTTCCGGCCGGGCCTTACGGCCCTCGCCTGCCCCGCACTCATGC TTGCCGGCGCGGCGGACGGCGCGCTGCCGAAAACCCTGGCTGGCCTCGCCGAGGCCGTGCCGGACGGCCGATTCGTCGAG ATCCCCGATGCCGGCCACCTGCCCAATATTGAGCAGCCAGGCGCCTTCAACGCGGCGCTGGCTACCTTTCTGAAGAGAGG CGCGGCATGA
Upstream 100 bases:
>100_bases CCGCAGGGCTTTGAGCCCCTGCGGAGCGCACTCGCGTCGGTGGCCGGCATCGGGGCGCAGATGTTCAATCTCTATGCCCC CTATTTCCGGGGTTGAGCCG
Downstream 100 bases:
>100_bases GGATCAAGGATCTCCCCCTGGACGAGATGACGCCCGAGCAGCGGGCGGTGGCGGAAGAGGCCATCTCGGGCAAGCGCGGC CGCGTTCCCGCGCCCCTCCG
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MPRANPNSIEIDGLTFHYRVDGPEGAHWLVFSNSLMTDLSLWDDQAAAFGESFRILRYDQRGHGRTGIPAEDCTMERLAA DLIGLMDALGIARTHLVGISMGAATCLGAALAQPRRVASLVMADGQAATPTGGAQAWEERIALARTQGMAGLADPTIARW FQPASVETNGEGVRRVAGMIAATPLDGFLRAVRALQRFDFRPGLTALACPALMLAGAADGALPKTLAGLAEAVPDGRFVE IPDAGHLPNIEQPGAFNAALATFLKRGAA
Sequences:
>Translated_269_residues MPRANPNSIEIDGLTFHYRVDGPEGAHWLVFSNSLMTDLSLWDDQAAAFGESFRILRYDQRGHGRTGIPAEDCTMERLAA DLIGLMDALGIARTHLVGISMGAATCLGAALAQPRRVASLVMADGQAATPTGGAQAWEERIALARTQGMAGLADPTIARW FQPASVETNGEGVRRVAGMIAATPLDGFLRAVRALQRFDFRPGLTALACPALMLAGAADGALPKTLAGLAEAVPDGRFVE IPDAGHLPNIEQPGAFNAALATFLKRGAA >Mature_268_residues PRANPNSIEIDGLTFHYRVDGPEGAHWLVFSNSLMTDLSLWDDQAAAFGESFRILRYDQRGHGRTGIPAEDCTMERLAAD LIGLMDALGIARTHLVGISMGAATCLGAALAQPRRVASLVMADGQAATPTGGAQAWEERIALARTQGMAGLADPTIARWF QPASVETNGEGVRRVAGMIAATPLDGFLRAVRALQRFDFRPGLTALACPALMLAGAADGALPKTLAGLAEAVPDGRFVEI PDAGHLPNIEQPGAFNAALATFLKRGAA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787244, Length=239, Percent_Identity=27.1966527196653, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28284; Mature: 28152
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRANPNSIEIDGLTFHYRVDGPEGAHWLVFSNSLMTDLSLWDDQAAAFGESFRILRYDQ CCCCCCCEEEECCEEEEEEECCCCCCEEEEECCCHHHHHHHHCHHHHHHCCCEEEEEECC RGHGRTGIPAEDCTMERLAADLIGLMDALGIARTHLVGISMGAATCLGAALAQPRRVASL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VMADGQAATPTGGAQAWEERIALARTQGMAGLADPTIARWFQPASVETNGEGVRRVAGMI HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH AATPLDGFLRAVRALQRFDFRPGLTALACPALMLAGAADGALPKTLAGLAEAVPDGRFVE HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEE IPDAGHLPNIEQPGAFNAALATFLKRGAA CCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PRANPNSIEIDGLTFHYRVDGPEGAHWLVFSNSLMTDLSLWDDQAAAFGESFRILRYDQ CCCCCCEEEECCEEEEEEECCCCCCEEEEECCCHHHHHHHHCHHHHHHCCCEEEEEECC RGHGRTGIPAEDCTMERLAADLIGLMDALGIARTHLVGISMGAATCLGAALAQPRRVASL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VMADGQAATPTGGAQAWEERIALARTQGMAGLADPTIARWFQPASVETNGEGVRRVAGMI HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH AATPLDGFLRAVRALQRFDFRPGLTALACPALMLAGAADGALPKTLAGLAEAVPDGRFVE HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEE IPDAGHLPNIEQPGAFNAALATFLKRGAA CCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8181753 [H]