| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fabG [H]
Identifier: 158422943
GI number: 158422943
Start: 1478403
End: 1479203
Strand: Reverse
Name: fabG [H]
Synonym: AZC_1319
Alternate gene names: 158422943
Gene position: 1479203-1478403 (Counterclockwise)
Preceding gene: 158422944
Following gene: 158422942
Centisome position: 27.55
GC content: 69.29
Gene sequence:
>801_bases ATGAGCGGACGGCTCGCCAACAAGGTTGCCATCGTCACCGGCGCCGGCTGCGTCGGCCCCGGCTGGGGCAACGGGCGCGC CGCTGCCGTGCTGTTCGCCCGCGAGGGCGCTAGCGTGTTCGCGGTGGACAAGAACCGCGACAGCATGGAAGAGACGCTGG ACCGCGCCCGCGCCGAGGGCGGCACCATCGCGCCCTACGCCTGCGACGTCACGGATAGCGCGGCGGTGGCGGACATGGTG TCCGCCTGCCTCTCCACCTTCGGGCGGGCCGATATTCTCGTGAACAACGTGGGCGGTTCGGCGCCCGGCGGCCCGGTGGA ACTCTCCGAGGAGCAGTGGGACCGGCAGATCGATTTCAATCTCAAGAGCGTCTATCTCACCTGCAAGCATGTGCTCCCTG TGATGGAGGCGCAGGGCGGCGGCGCCATCGTCAACACGGCCTCGACCTCCGGCATCCGCTGGACCGGCGCGGCGCAGGTG GGCTACGCCTCCTCCAAGGCCGGCGTGATCCAGTTTTCCCGCGTGGTCGCCGTGCAATATGCCAAGCGCAACATCCGCGT GAACACCGTAGTGCCGGGCCAGATGCACACGCCCATGGTCGAGGCCCGACTTGCGGGACAAAGGGCCGGCGGCGACGTGG ATGTCCTGCTCCAGTCCCGCCTTGCCCGCATCCCGCTCGGCTTCATGGGCGACGGCCGCGACACCGCGGCCGCTGCCCTG TTCCTTGCCTCGGACGAGGCCCGTTTCGTGACCGGCACGGAGATCGTCGTCGATGGCGGCATGAGCGCCCGGTGTGACTG A
Upstream 100 bases:
>100_bases CCTCCTTGGCTACTACACGCTGGTGGCCTTCACCCTCAACGTCTTCGACATCGGCCTGCCCGAGGGCGAGACGTCTGCCC TGGAAGCGTAAGGCAAGACC
Downstream 100 bases:
>100_bases CATGAGCGCTCCCCTCACACCCTGCCCGCCGCCCAATCCTGACCCAAGCCTTCCGGCGCGACGGCCACCCGCCGGCGCCT GCGACGCCCATTGCCACATC
Product: short-chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSGRLANKVAIVTGAGCVGPGWGNGRAAAVLFAREGASVFAVDKNRDSMEETLDRARAEGGTIAPYACDVTDSAAVADMV SACLSTFGRADILVNNVGGSAPGGPVELSEEQWDRQIDFNLKSVYLTCKHVLPVMEAQGGGAIVNTASTSGIRWTGAAQV GYASSKAGVIQFSRVVAVQYAKRNIRVNTVVPGQMHTPMVEARLAGQRAGGDVDVLLQSRLARIPLGFMGDGRDTAAAAL FLASDEARFVTGTEIVVDGGMSARCD
Sequences:
>Translated_266_residues MSGRLANKVAIVTGAGCVGPGWGNGRAAAVLFAREGASVFAVDKNRDSMEETLDRARAEGGTIAPYACDVTDSAAVADMV SACLSTFGRADILVNNVGGSAPGGPVELSEEQWDRQIDFNLKSVYLTCKHVLPVMEAQGGGAIVNTASTSGIRWTGAAQV GYASSKAGVIQFSRVVAVQYAKRNIRVNTVVPGQMHTPMVEARLAGQRAGGDVDVLLQSRLARIPLGFMGDGRDTAAAAL FLASDEARFVTGTEIVVDGGMSARCD >Mature_265_residues SGRLANKVAIVTGAGCVGPGWGNGRAAAVLFAREGASVFAVDKNRDSMEETLDRARAEGGTIAPYACDVTDSAAVADMVS ACLSTFGRADILVNNVGGSAPGGPVELSEEQWDRQIDFNLKSVYLTCKHVLPVMEAQGGGAIVNTASTSGIRWTGAAQVG YASSKAGVIQFSRVVAVQYAKRNIRVNTVVPGQMHTPMVEARLAGQRAGGDVDVLLQSRLARIPLGFMGDGRDTAAAALF LASDEARFVTGTEIVVDGGMSARCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=270, Percent_Identity=32.2222222222222, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=33.4677419354839, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI66933014, Length=260, Percent_Identity=32.6923076923077, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI32483357, Length=261, Percent_Identity=29.5019157088123, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=27.1698113207547, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI59889578, Length=237, Percent_Identity=33.7552742616034, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI126723750, Length=264, Percent_Identity=28.4090909090909, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI10190704, Length=262, Percent_Identity=32.4427480916031, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=30.2325581395349, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=32.1428571428571, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI7705925, Length=264, Percent_Identity=30.6818181818182, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI4503301, Length=232, Percent_Identity=27.1551724137931, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI31542939, Length=203, Percent_Identity=32.512315270936, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI126723191, Length=187, Percent_Identity=29.4117647058824, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI40807363, Length=202, Percent_Identity=29.7029702970297, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=29.7979797979798, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI224922801, Length=176, Percent_Identity=34.0909090909091, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=28.8557213930348, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=35.6589147286822, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=35.8267716535433, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1787905, Length=257, Percent_Identity=33.0739299610895, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1789208, Length=262, Percent_Identity=32.4427480916031, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI87082160, Length=263, Percent_Identity=30.4182509505703, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1790717, Length=265, Percent_Identity=27.5471698113208, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI2367175, Length=257, Percent_Identity=29.5719844357977, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1789378, Length=261, Percent_Identity=27.9693486590038, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=31.6, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787820, Length=186, Percent_Identity=30.1075268817204, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1788459, Length=256, Percent_Identity=24.21875, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=29.4354838709677, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17559104, Length=268, Percent_Identity=33.5820895522388, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17561402, Length=264, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17555706, Length=261, Percent_Identity=32.9501915708812, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI25147288, Length=264, Percent_Identity=32.1969696969697, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=32.9710144927536, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17560150, Length=267, Percent_Identity=30.7116104868914, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=31.7518248175182, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17560676, Length=262, Percent_Identity=29.0076335877863, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=32.7137546468402, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=30.5970149253731, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17562904, Length=267, Percent_Identity=31.0861423220974, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI193204405, Length=271, Percent_Identity=30.2583025830258, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=30.2238805970149, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=32.7067669172932, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17560332, Length=272, Percent_Identity=32.7205882352941, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17544670, Length=280, Percent_Identity=31.0714285714286, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=30.188679245283, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17563726, Length=270, Percent_Identity=30, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17538486, Length=269, Percent_Identity=30.8550185873606, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=29.5454545454545, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=30.859375, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560220, Length=271, Percent_Identity=28.7822878228782, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=30.9803921568627, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17565030, Length=272, Percent_Identity=30.1470588235294, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17536025, Length=262, Percent_Identity=30.5343511450382, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17508895, Length=207, Percent_Identity=29.4685990338164, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=30.1526717557252, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561272, Length=241, Percent_Identity=31.5352697095436, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI115534694, Length=260, Percent_Identity=28.0769230769231, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI193203115, Length=185, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193203117, Length=200, Percent_Identity=28, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17564282, Length=218, Percent_Identity=27.9816513761468, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17567345, Length=197, Percent_Identity=28.4263959390863, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17508651, Length=215, Percent_Identity=27.4418604651163, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=168, Percent_Identity=35.7142857142857, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324126, Length=207, Percent_Identity=27.0531400966184, Blast_Score=76, Evalue=5e-15, Organism=Drosophila melanogaster, GI21357041, Length=266, Percent_Identity=38.7218045112782, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI23397609, Length=261, Percent_Identity=38.3141762452107, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI28571526, Length=264, Percent_Identity=37.1212121212121, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24639444, Length=262, Percent_Identity=35.4961832061069, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI21355319, Length=265, Percent_Identity=31.6981132075472, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI24644339, Length=265, Percent_Identity=33.9622641509434, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI18859837, Length=198, Percent_Identity=33.8383838383838, Blast_Score=94, Evalue=9e-20, Organism=Drosophila melanogaster, GI24643142, Length=262, Percent_Identity=29.3893129770992, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24644337, Length=241, Percent_Identity=29.4605809128631, Blast_Score=81, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27612; Mature: 27480
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLANKVAIVTGAGCVGPGWGNGRAAAVLFAREGASVFAVDKNRDSMEETLDRARAEG CCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCC GTIAPYACDVTDSAAVADMVSACLSTFGRADILVNNVGGSAPGGPVELSEEQWDRQIDFN CEECCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCHHHCCCEECCC LKSVYLTCKHVLPVMEAQGGGAIVNTASTSGIRWTGAAQVGYASSKAGVIQFSRVVAVQY HHHEEEEHHHHHHHEECCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHEE AKRNIRVNTVVPGQMHTPMVEARLAGQRAGGDVDVLLQSRLARIPLGFMGDGRDTAAAAL HHCCEEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHEEEE FLASDEARFVTGTEIVVDGGMSARCD EEECCCCEEEECCEEEEECCCCCCCC >Mature Secondary Structure SGRLANKVAIVTGAGCVGPGWGNGRAAAVLFAREGASVFAVDKNRDSMEETLDRARAEG CCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCC GTIAPYACDVTDSAAVADMVSACLSTFGRADILVNNVGGSAPGGPVELSEEQWDRQIDFN CEECCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCHHHCCCEECCC LKSVYLTCKHVLPVMEAQGGGAIVNTASTSGIRWTGAAQVGYASSKAGVIQFSRVVAVQY HHHEEEEHHHHHHHEECCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHEE AKRNIRVNTVVPGQMHTPMVEARLAGQRAGGDVDVLLQSRLARIPLGFMGDGRDTAAAAL HHCCEEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHEEEE FLASDEARFVTGTEIVVDGGMSARCD EEECCCCEEEECCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]