| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422942
Identifier: 158422942
GI number: 158422942
Start: 1477499
End: 1478401
Strand: Reverse
Name: 158422942
Synonym: AZC_1318
Alternate gene names: NA
Gene position: 1478401-1477499 (Counterclockwise)
Preceding gene: 158422943
Following gene: 158422941
Centisome position: 27.53
GC content: 68.11
Gene sequence:
>903_bases ATGAGCGCTCCCCTCACACCCTGCCCGCCGCCCAATCCTGACCCAAGCCTTCCGGCGCGACGGCCACCCGCCGGCGCCTG CGACGCCCATTGCCACATCTACGGCCCGTTCGCCCGTTTCCCCCTGCCCGATGACCGCAGTTTCACGCCATCCGAGGTCC CGGAAACGGCCCTGCGCGCGCTGCACGAGCGGATGGGCATTTCCCGTGCCATCCTCGTCCAGAGCCAGGGCCACGGCTTC GATCACCGCCCTCTCCTCGACGCGCTGGAACGCGAGCCGGCCCGCTATCGCGGCGTCGCGCTGATCAGGCCCGACACGAG CGATGCCGAGATCAGAACCTACGACAGGGCAGGCATTTGCGGGGTGCGCTTCAGCTTCCTGTCCCACCTCGGCGGGGCAC CCGACCTTGAGGCTGTGGCCGCTGCTGCCCGGCGCGTGGCCGGGCTCGGCTGGCACGTCGCCATCCACGTGACCGGTACC GACATCGCGCGTTACCGGGACTTCATCTCCGGACTGCCGACACGCGTGGTAATTGATCACATGGCCCGCCCGGATATCCG GCAGGATCTCGCGCCGGTCCGAGAGGCCCTGTTCCGGCTGCTGGACACCGGTCGCGTCTGGGTGAAGCTCAGCGGTGCCG ACCGCCTCTCGCATGCCGGGCCCCCCTATGAGGACGTCGTCCCCTACGCGCGCAGCCTGCTGGACCACGCGCCGGAGCGG GCGCTGTGGGGCAGCGACTGGCCGCATGTGAACCTGTCCGGCCCCATGCCCGACGACGGGACTCTGGTGGATTTCGTTGA TCACATCGCCATCACGCCTGCGCTCAAGCAGAGGTTGCTGGTTGAGAACCCCGAGACATTCTTCGGCTTTCCAGCCTCCC GCAATGATAATCTGTCAGGCTGA
Upstream 100 bases:
>100_bases ACCGCGGCCGCTGCCCTGTTCCTTGCCTCGGACGAGGCCCGTTTCGTGACCGGCACGGAGATCGTCGTCGATGGCGGCAT GAGCGCCCGGTGTGACTGAC
Downstream 100 bases:
>100_bases TTTTTATCGAAGCAAACTGTCACCGTTCGAACATTCGCTCACAGCGCACACCTCAGGCGGCAGCACGCCTCGCCCTCAGC CGCCATCGTTCTGATTGGAT
Product: amidohydrolase
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSAPLTPCPPPNPDPSLPARRPPAGACDAHCHIYGPFARFPLPDDRSFTPSEVPETALRALHERMGISRAILVQSQGHGF DHRPLLDALEREPARYRGVALIRPDTSDAEIRTYDRAGICGVRFSFLSHLGGAPDLEAVAAAARRVAGLGWHVAIHVTGT DIARYRDFISGLPTRVVIDHMARPDIRQDLAPVREALFRLLDTGRVWVKLSGADRLSHAGPPYEDVVPYARSLLDHAPER ALWGSDWPHVNLSGPMPDDGTLVDFVDHIAITPALKQRLLVENPETFFGFPASRNDNLSG
Sequences:
>Translated_300_residues MSAPLTPCPPPNPDPSLPARRPPAGACDAHCHIYGPFARFPLPDDRSFTPSEVPETALRALHERMGISRAILVQSQGHGF DHRPLLDALEREPARYRGVALIRPDTSDAEIRTYDRAGICGVRFSFLSHLGGAPDLEAVAAAARRVAGLGWHVAIHVTGT DIARYRDFISGLPTRVVIDHMARPDIRQDLAPVREALFRLLDTGRVWVKLSGADRLSHAGPPYEDVVPYARSLLDHAPER ALWGSDWPHVNLSGPMPDDGTLVDFVDHIAITPALKQRLLVENPETFFGFPASRNDNLSG >Mature_299_residues SAPLTPCPPPNPDPSLPARRPPAGACDAHCHIYGPFARFPLPDDRSFTPSEVPETALRALHERMGISRAILVQSQGHGFD HRPLLDALEREPARYRGVALIRPDTSDAEIRTYDRAGICGVRFSFLSHLGGAPDLEAVAAAARRVAGLGWHVAIHVTGTD IARYRDFISGLPTRVVIDHMARPDIRQDLAPVREALFRLLDTGRVWVKLSGADRLSHAGPPYEDVVPYARSLLDHAPERA LWGSDWPHVNLSGPMPDDGTLVDFVDHIAITPALKQRLLVENPETFFGFPASRNDNLSG
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32903; Mature: 32771
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLTPCPPPNPDPSLPARRPPAGACDAHCHIYGPFARFPLPDDRSFTPSEVPETALRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCHHHCHHHHHHH LHERMGISRAILVQSQGHGFDHRPLLDALEREPARYRGVALIRPDTSDAEIRTYDRAGIC HHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCHHHCCEEEECCCCCCCCEEECCCCCCH GVRFSFLSHLGGAPDLEAVAAAARRVAGLGWHVAIHVTGTDIARYRDFISGLPTRVVIDH HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHH MARPDIRQDLAPVREALFRLLDTGRVWVKLSGADRLSHAGPPYEDVVPYARSLLDHAPER HCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHCCCC ALWGSDWPHVNLSGPMPDDGTLVDFVDHIAITPALKQRLLVENPETFFGFPASRNDNLSG CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHEECCCCCCCCCCC >Mature Secondary Structure SAPLTPCPPPNPDPSLPARRPPAGACDAHCHIYGPFARFPLPDDRSFTPSEVPETALRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCHHHCHHHHHHH LHERMGISRAILVQSQGHGFDHRPLLDALEREPARYRGVALIRPDTSDAEIRTYDRAGIC HHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCHHHCCEEEECCCCCCCCEEECCCCCCH GVRFSFLSHLGGAPDLEAVAAAARRVAGLGWHVAIHVTGTDIARYRDFISGLPTRVVIDH HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHH MARPDIRQDLAPVREALFRLLDTGRVWVKLSGADRLSHAGPPYEDVVPYARSLLDHAPER HCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHCCCC ALWGSDWPHVNLSGPMPDDGTLVDFVDHIAITPALKQRLLVENPETFFGFPASRNDNLSG CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA