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The map label for this gene is mcp4 [H]

Identifier: 158422941

GI number: 158422941

Start: 1475298

End: 1477391

Strand: Reverse

Name: mcp4 [H]

Synonym: AZC_1317

Alternate gene names: 158422941

Gene position: 1477391-1475298 (Counterclockwise)

Preceding gene: 158422942

Following gene: 158422939

Centisome position: 27.51

GC content: 67.29

Gene sequence:

>2094_bases
ATGTTCAAGCGCTTCTCCGTCAAGGCTCTGCTCACCTGGGTCATCGCCCTCCTGGCGCTCGGTCTGGTGACCGTTCTGGC
CAGTGGAGCGTGGGAATCCGCCCGCTCCTATGCAACGGCAGCCCGCATTTCCGCAGTAACCCGCGTCTCTCAGGACGTCT
TCACTTCCCTCCACAACTTGCGCCTTGACCGGGCGTCGGCACTGCGCGACCTGCCGGCGGATCGGGTTTTCGCGACCCTG
ACGCCGCAGCTGGAAACCTCCCGCAAGGCCGAAATGCCGGCGCTCAACGCAACCCTCGCGGGGCTTCGGACCCTTGATTT
CGCCGGACACGAGGATTTGGCGACAAGTCTCCAGGGTGCGATCAGCCGCCTGGCGGACCTTCACACGGAATCTACCGCCG
CGCTCTCCCGCCCGAAAGCCGAACGCCGCCCCTCCCTGTTGACTGACTACAACCGGGAAACCGCAGCACTGCTGGAGCTG
CTCGACCGCATCTCGGCCCAGCTCGTCAAGTCGGTGAAGCTCCAGGATCCCTATGTGGACCAGTTGTTCCAGATCAAGCA
GCTGGCCTGGACCACGCGGAACGCGGCGGGCGACACGGCGCTGCTGGTGTCCAATCCGCTGGCCGGGCAGCCGCTGGTGA
AGGAGCCCCTGCAACGCTATGCCACCCTCACCAGCCAGATCGACAGCACCTGGGCTGTCCTCGTCGAGTTCGCAGCCAGC
ATGCCGCTGCCGGACCAACTGAGCAGCCGGATCGAGGCCGCCAAGCGGGAGTTCTTCAGCCCCACCTTCATGGACCTGCG
CCTGAACACCCTCAAGGCGCTCATGGCGGGGACGCCGCCCGGCATCACCGCTGAGGAATGGACGCCGCTGGCCGTGTCCA
AGCTCGCCTATTTCCAGGCCGTGGCGCAGACCGCCCTCGACCTTGCCGAGCAACATGCGCAGAACCGGCAGGCGGATGCC
TTCCGCTCCCTGCTGATCCAGAGCGGGCTGCTTCTCCTCTCCGCCGTGTTCGGGATCGCGATGATCGTCGTCGTCACCCG
GCGGGTGACCCGACCGCTGGAGCGCATGACCACGGTCATGAAGAGCCTCGCCGCCGGCGATCTTGCGGTGACGGTAAGCG
ACACCGATCGTTCCGACGAGGTCGGCGCCATGGCCCAGGCGGTGCTGGTGTTCCGGGAGGAGATGGCCCGCAACGCAGAC
CTGGAACGCGAGAATGCCGAGACCCGCGAGCGCGCGGAGGCCGAGCGGCATCAGGCGATGCAGGCGCTCGCGGACGAGTT
CGAGCAGGCGGTCGGCGGCATCATCCGCAACGTCTCCACCTCATCGGACGCGCTCCACCAGACTGCGCGCAGCATGTCGA
CCACGGCGCAGGAGACCTCATCGCGCTCGACCGCCGTGGCTGCGGCGGCCGAACAGGCGTCCACCAATGTGGTGATGGTG
GCCTCCTCGGCGGAGGAACTGGGAGCGTCCGTCGATGAAATCTCCCGCCAGGTGGAGCAGTCCGCCAGCCTCTCGGCCAG
CGCCGTGGCCGAGGCCGCCCGCACCGGGGAGGTGATCCGCGAACTCGCCCAGGCGGCCTCACGCATCGGCGACTTCATCG
GCCTCATCTCCAACATCGCCTCCAAGACCAACCTCCTCGCCCTCAACGCCACCATCGAGGCCGCGCGGGCGGGCGACGCT
GGCAAGGGCTTCGCGGTCGTGGCCTCCGAGGTGAAAGACCTTGCCAGCCAGACCGGCAAGGCCACGGAGGAGATCGAGGC
CCAGATCAGCGCCATCCAGCGCACCACCGAACATGCGGTGCAGGTGATCGAGAACGTCAGCAACCAGATCCGCCAGATGA
GCGACGTGGCGACAGGAATTTCCGCCGCCGTGGAGCAGCAGGGCGTCGCGACCAAGGAGATCGTCCGCAACGTCGATCAG
GCCGCCACGGGCACCAACACGGTGACCAGCCATATCGCGGACGTCGCCCGCACCGCCGACCAGACGGGCACGGCGGCCTC
AGAGGTGCTGTCCGCGTCAGCCACCCTCTCCGAACAGGCATCGCACCTGGAAACCCAGATGCGACGCTTCCTCGGCACGA
TCCGGGCCGCCTGA

Upstream 100 bases:

>100_bases
CGAAGCAAACTGTCACCGTTCGAACATTCGCTCACAGCGCACACCTCAGGCGGCAGCACGCCTCGCCCTCAGCCGCCATC
GTTCTGATTGGATCATCGGC

Downstream 100 bases:

>100_bases
CCCCGCCGGCCGATCCCCTGCCGGATTGCCCGCGAGGGCCGGCGGCGGCAATCACGCCCACGGCCGGCTATCGCCTCGGC
GCCTGCGGGCCGTCCAGGGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MFKRFSVKALLTWVIALLALGLVTVLASGAWESARSYATAARISAVTRVSQDVFTSLHNLRLDRASALRDLPADRVFATL
TPQLETSRKAEMPALNATLAGLRTLDFAGHEDLATSLQGAISRLADLHTESTAALSRPKAERRPSLLTDYNRETAALLEL
LDRISAQLVKSVKLQDPYVDQLFQIKQLAWTTRNAAGDTALLVSNPLAGQPLVKEPLQRYATLTSQIDSTWAVLVEFAAS
MPLPDQLSSRIEAAKREFFSPTFMDLRLNTLKALMAGTPPGITAEEWTPLAVSKLAYFQAVAQTALDLAEQHAQNRQADA
FRSLLIQSGLLLLSAVFGIAMIVVVTRRVTRPLERMTTVMKSLAAGDLAVTVSDTDRSDEVGAMAQAVLVFREEMARNAD
LERENAETRERAEAERHQAMQALADEFEQAVGGIIRNVSTSSDALHQTARSMSTTAQETSSRSTAVAAAAEQASTNVVMV
ASSAEELGASVDEISRQVEQSASLSASAVAEAARTGEVIRELAQAASRIGDFIGLISNIASKTNLLALNATIEAARAGDA
GKGFAVVASEVKDLASQTGKATEEIEAQISAIQRTTEHAVQVIENVSNQIRQMSDVATGISAAVEQQGVATKEIVRNVDQ
AATGTNTVTSHIADVARTADQTGTAASEVLSASATLSEQASHLETQMRRFLGTIRAA

Sequences:

>Translated_697_residues
MFKRFSVKALLTWVIALLALGLVTVLASGAWESARSYATAARISAVTRVSQDVFTSLHNLRLDRASALRDLPADRVFATL
TPQLETSRKAEMPALNATLAGLRTLDFAGHEDLATSLQGAISRLADLHTESTAALSRPKAERRPSLLTDYNRETAALLEL
LDRISAQLVKSVKLQDPYVDQLFQIKQLAWTTRNAAGDTALLVSNPLAGQPLVKEPLQRYATLTSQIDSTWAVLVEFAAS
MPLPDQLSSRIEAAKREFFSPTFMDLRLNTLKALMAGTPPGITAEEWTPLAVSKLAYFQAVAQTALDLAEQHAQNRQADA
FRSLLIQSGLLLLSAVFGIAMIVVVTRRVTRPLERMTTVMKSLAAGDLAVTVSDTDRSDEVGAMAQAVLVFREEMARNAD
LERENAETRERAEAERHQAMQALADEFEQAVGGIIRNVSTSSDALHQTARSMSTTAQETSSRSTAVAAAAEQASTNVVMV
ASSAEELGASVDEISRQVEQSASLSASAVAEAARTGEVIRELAQAASRIGDFIGLISNIASKTNLLALNATIEAARAGDA
GKGFAVVASEVKDLASQTGKATEEIEAQISAIQRTTEHAVQVIENVSNQIRQMSDVATGISAAVEQQGVATKEIVRNVDQ
AATGTNTVTSHIADVARTADQTGTAASEVLSASATLSEQASHLETQMRRFLGTIRAA
>Mature_697_residues
MFKRFSVKALLTWVIALLALGLVTVLASGAWESARSYATAARISAVTRVSQDVFTSLHNLRLDRASALRDLPADRVFATL
TPQLETSRKAEMPALNATLAGLRTLDFAGHEDLATSLQGAISRLADLHTESTAALSRPKAERRPSLLTDYNRETAALLEL
LDRISAQLVKSVKLQDPYVDQLFQIKQLAWTTRNAAGDTALLVSNPLAGQPLVKEPLQRYATLTSQIDSTWAVLVEFAAS
MPLPDQLSSRIEAAKREFFSPTFMDLRLNTLKALMAGTPPGITAEEWTPLAVSKLAYFQAVAQTALDLAEQHAQNRQADA
FRSLLIQSGLLLLSAVFGIAMIVVVTRRVTRPLERMTTVMKSLAAGDLAVTVSDTDRSDEVGAMAQAVLVFREEMARNAD
LERENAETRERAEAERHQAMQALADEFEQAVGGIIRNVSTSSDALHQTARSMSTTAQETSSRSTAVAAAAEQASTNVVMV
ASSAEELGASVDEISRQVEQSASLSASAVAEAARTGEVIRELAQAASRIGDFIGLISNIASKTNLLALNATIEAARAGDA
GKGFAVVASEVKDLASQTGKATEEIEAQISAIQRTTEHAVQVIENVSNQIRQMSDVATGISAAVEQQGVATKEIVRNVDQ
AATGTNTVTSHIADVARTADQTGTAASEVLSASATLSEQASHLETQMRRFLGTIRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=312, Percent_Identity=29.4871794871795, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI2367378, Length=353, Percent_Identity=28.0453257790368, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1787690, Length=363, Percent_Identity=26.9972451790634, Blast_Score=102, Evalue=1e-22,
Organism=Escherichia coli, GI1788194, Length=271, Percent_Identity=29.1512915129151, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1789453, Length=165, Percent_Identity=37.5757575757576, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 74507; Mature: 74507

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRFSVKALLTWVIALLALGLVTVLASGAWESARSYATAARISAVTRVSQDVFTSLHNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDRASALRDLPADRVFATLTPQLETSRKAEMPALNATLAGLRTLDFAGHEDLATSLQGA
HHHHHHHHHHCCHHHHHHHCCCCHHCCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
ISRLADLHTESTAALSRPKAERRPSLLTDYNRETAALLELLDRISAQLVKSVKLQDPYVD
HHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QLFQIKQLAWTTRNAAGDTALLVSNPLAGQPLVKEPLQRYATLTSQIDSTWAVLVEFAAS
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPLPDQLSSRIEAAKREFFSPTFMDLRLNTLKALMAGTPPGITAEEWTPLAVSKLAYFQA
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
VAQTALDLAEQHAQNRQADAFRSLLIQSGLLLLSAVFGIAMIVVVTRRVTRPLERMTTVM
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLAAGDLAVTVSDTDRSDEVGAMAQAVLVFREEMARNADLERENAETRERAEAERHQAM
HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QALADEFEQAVGGIIRNVSTSSDALHQTARSMSTTAQETSSRSTAVAAAAEQASTNVVMV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEE
ASSAEELGASVDEISRQVEQSASLSASAVAEAARTGEVIRELAQAASRIGDFIGLISNIA
ECCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKTNLLALNATIEAARAGDAGKGFAVVASEVKDLASQTGKATEEIEAQISAIQRTTEHAV
HHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QVIENVSNQIRQMSDVATGISAAVEQQGVATKEIVRNVDQAATGTNTVTSHIADVARTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QTGTAASEVLSASATLSEQASHLETQMRRFLGTIRAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKRFSVKALLTWVIALLALGLVTVLASGAWESARSYATAARISAVTRVSQDVFTSLHNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDRASALRDLPADRVFATLTPQLETSRKAEMPALNATLAGLRTLDFAGHEDLATSLQGA
HHHHHHHHHHCCHHHHHHHCCCCHHCCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
ISRLADLHTESTAALSRPKAERRPSLLTDYNRETAALLELLDRISAQLVKSVKLQDPYVD
HHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QLFQIKQLAWTTRNAAGDTALLVSNPLAGQPLVKEPLQRYATLTSQIDSTWAVLVEFAAS
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPLPDQLSSRIEAAKREFFSPTFMDLRLNTLKALMAGTPPGITAEEWTPLAVSKLAYFQA
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
VAQTALDLAEQHAQNRQADAFRSLLIQSGLLLLSAVFGIAMIVVVTRRVTRPLERMTTVM
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLAAGDLAVTVSDTDRSDEVGAMAQAVLVFREEMARNADLERENAETRERAEAERHQAM
HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QALADEFEQAVGGIIRNVSTSSDALHQTARSMSTTAQETSSRSTAVAAAAEQASTNVVMV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEE
ASSAEELGASVDEISRQVEQSASLSASAVAEAARTGEVIRELAQAASRIGDFIGLISNIA
ECCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKTNLLALNATIEAARAGDAGKGFAVVASEVKDLASQTGKATEEIEAQISAIQRTTEHAV
HHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QVIENVSNQIRQMSDVATGISAAVEQQGVATKEIVRNVDQAATGTNTVTSHIADVARTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QTGTAASEVLSASATLSEQASHLETQMRRFLGTIRAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]